蛋鸡J亚群禽白血病的分子生物学诊断

根据J亚群白血病病毒(ALV-J)原型株HPRS-103的序列设计了一对针对外源性ALV-J引物H5和H7,从发生ML病死鸡的肿瘤、骨髓、肝脏、脾脏和输卵管组织中提取DNA作为模板,经PCR扩增得到长度为545bp的片段,对其序列进行测定后,与ALV-J原型株HPRS-103的序列进行了比较,发现其核苷酸同源性为97．4％,所编码氨基酸的同源性为96．1％。该片段含有ALV-J gp85编码基因的部分序列和ALV-J pol基因的部分序列,从分子水平上证实了蛋鸡发生J亚群禽白血病,进一步证明了此前根据病理学观察、免疫组化及免疫荧光诊断的结果。这是首次从分子水平上证明蛋用型鸡发生J亚群禽白血病。     

马立克病毒基因缺失疫苗与商品化疫苗的分子鉴别方法

为了对马立克病毒(MDV)meq基因缺失疫苗株SC9-1与商品化MD疫苗CVI988/Rispens株、814株和HVT FC-126株进行分子鉴别,本研究根据疫苗株SC9-1与其它MD疫苗株的基因组差异,分别针对I型MDVmeq基因以及SC9-1基因组中的禽网状内皮组织增殖症病毒-长末端重复序列(REV-LTR)插入片段,设计三对PCR扩增引物,同时合成针对meq基因和REV-LTR片段的地高辛标记探针,通过PCR扩增和斑点杂交方法区分SC9-1株与其他疫苗株。结果表明,使用针对meq基因的引物F1/R1进行PCR扩增,SC9-1株、CVI988/Rispens株、814株分别扩增出184bp、1 297bp、1 297bp目的片段,HVT FC-126株没有条带;使用针对meq基因的引物F2/R2进行PCR扩增,CVI988/Rispens株、814株均扩增出746bp目的片段,SC9-1株、HVT FC-126株均没有条带;使用针对REV-LTR片段设计的引物F3/R3进行PCR扩增,SC9-1株扩增出512bp目的片段,CVI988/Rispens株、814株、HVT FC-126株均没有条带。同时,使用针对meq基因的探针进行斑点杂交,CVI988/Rispens株、814株均显示阳性结果,SC9-1株、HVT FC-126株均为阴性;使用针对REV-LTR的探针进行斑点杂交,SC9-1株显示阳性结果,CVI988/Rispens株、814株、HVT FC-126株均为阴性。因此,利用本研究设计的特异性PCR引物以及探针,通过PCR扩增和斑点杂交方法可有效区分SC9-1与其他商品化MD疫苗。     

原位杂交及原位PCR检测幽门螺杆菌

本研究建立了检测幽门螺杆菌的原位杂交和原位ＰＣＲ技术,采用ＰＣＲ掺入的方法标记原位杂交的生物素探针,６份ＨＰ阳性胃活检组织冰冻切片杂交均为阳性,６份阴性对照组织为阴性。９／１２份ＨＰ阳性对照组织石蜡切片杂交阳性,２份阴性对照切片为阴性。３份阳性对照猫胃粘膜冰冻切片杂交也是阳性。原位ＰＣＲ的引物来自ＨＰ的１６ｓｒＲＮＡ基因,在扩增过程掺入生物素基因。４／４例ＨＰ阳性人胃粘膜冰冻切片原位扩增阳性,２／     

猪FGL2基因cDNA末端序列检测及结构分析

检测猪FGL2基因cDNA末端序列并对该基因结构初步分析。α-32P dCTP放射性同位素标记cDNA探针筛选猪基因组DNA文库;cDNA末端快速扩增(rapid amplification of cDNA end,RACE)。以猪正常小肠及心脏组织提取新鲜总RNA,反转录后作为模板,设计基因特异性引物,采用Advantage 2 聚合酶混合物进行PCR扩增;依据猪与人FGL2基因3′端已知同源序列设计PCR上游引物,以人FGL2基因3′末端序列设计下游引物,以猪基因组DNA为模板采用Advantage 2 聚合酶混合物进行PCR反应;PCR载体重组质粒DNA亚克隆扩增。同位素探针未能筛选到特异阳性克隆,RACE反应检测到特异性转录起始位置及第一个转录终止位置,但仍未检测到第二个转录终止位置。猪基因组DNA行PCR扩增成功检测到猪FGL2基因3′末端未知序列及第二个转录终止位置。     

简并PCR结合RACE技术克隆申克孢子丝菌未知过氧化氢酶基因

目的 克隆孢子丝菌未知过氧化氢酶基因,命名为Sscat基因.方法 根据生物信息库中7种已知真菌过氧化氢酶氨基酸序列的高度保守区域设计简并引物,PCR扩增获得部分Sscat基因cDNA片段,随后应用RACE技术分别扩增其3’端和5’端未知序列.结果 Sscat基因cDNA序列全长1746 bp,其中包括5’端121 b...     

结球甘蓝抗TuMV相关基因的克隆

以结球甘蓝高抗TuMV自交不亲和系84075为材料,构建了cDNA文库。根据抗病基因保守序列（NBS－LRR）设计一对简并引物,以84075的基因组DNA和cDNA为模板,进行PCR扩增,分别扩增出一条513bp片段,扩增片段进行克隆测序。选取两个与抗病基因同源性较高的克隆片段作探针（命名Borl,Bor2）,对构建的cDNA文库进行筛选,得到一个阳性克隆（命名TuR2）,测序及序列分析表明,该基因总长为762bp,编码226个氨基酸、包含681bp的开放阅读框。与已克隆的抗病基因有不同程度的同源性。利用TuR2作探针,进行了Southern杂交、Northern杂交以及抗病性的共分离检测分析。结果表明,TuR2可能吧单拷贝形式存在,其表达是组成成型的,且无组织特异性;初步确定是一个与结球甘蓝抗TuMV相关的基因。     

PCR-特异探针杂交检测肿瘤组织 Ki-ras 基因点突变

用福尔马林固定-石腊包埋的人肿瘤组织切片,经脱腊处理直接用 PCR(poly-merase chain reaction)技术扩增 Ki-ras 癌基因序列中包括12,13位密码子的 DNA片段,并分别以5种含特异突变点的寡核苷酸探针代替3′端引物,经 PCR 扩增的产物作为点突变的阳性对照.用上述五种探针进行选择性斑点杂交,检测了人肺癌及结直肠癌组织的 Ki-ras 基因12及13位点突变.为了封闭杂交时的非特异结合,采用野生型冷探针与标记的含突变点的探针同时进行杂交的方法,有效地消除了杂交过程中可能产生的假阳性,而不影响真阳性反应的出现.因而增加了检测的可靠性.     

利用RACE技术扩增大豆抗病基因同源cDNA 5′末端序列

利用抗病基因保守序列筛选大豆cDNA文库,获得一抗病基因同源cDNA片段,命名为KR3-1。根据KR3-1设计两个基因特异引物（GSP 和 NGSP）,分别与通用引物(UPM)和巢式通用引物（NUP）共同扩增,成功地克隆到了该基因的5′末端序列。该扩增片段长447 bp,与已知序列重叠部分为129 bp。 Abstract:Based on part of a known partial cDNA sequence of a disease resistance gene homolog,KR3-1,obtained by screening a cDNA library from soybean,5′-RACE-PCR was carried out with gene specific primers and universal primers.After the nested PCR reaction,an amplified fragment of 447 bp in length which overlapped the known KR3-1 sequence by 129 bp was obtained subsequently.Thus,a 5′ cDNA end of KR3 was successfully cloned.     

肉类中大肠杆菌O157:H7多重PCR检测方法的建立

以编码大肠杆菌O157抗原的rfbE基因、 编码H7抗原的fliC基因以及编码毒力因子的eaeA基因为靶基因, 选择3对引物, 建立并优化了检测大肠杆菌O157:H7的多重PCR体系, 扩增产物分别为291 bp、625 bp、368 bp, 采用30株细菌验证了该多重PCR具有特异性。PCR检测的灵敏度在DNA水平上达到91.35 pg; 在存在干扰菌鼠伤寒沙门氏菌(Salmonella?typhimurium)的情况下, 当起始污染量为1.4 CFU/mL时, 37 ℃培养6 h 即可检出。在30份肉类样品中, 有3份检出了大肠杆菌O157:H7。本研究建立的多重PCR方法可特异、灵敏地实现对大肠杆菌O157:H7的检测。     

肉类中大肠杆菌O157:H7多重PCR检测方法的建立

以编码大肠杆菌 O157 抗原的 rfbE 基因、编码 H7 抗原的 fliC 基因以及编码毒力因子的eaeA 基因为靶基因,选择3对引物,建立并优化了检测大肠杆菌 O157:H7 的多重 PCR 体系,扩增产物分别为291 bp、625 bp,368 bp,采用30株细菌验证了该多重 PCR 具有特异性.PCR 检测的灵敏度在 DNA 水平上达到91.35 Pg;在存在干扰菌鼠伤寒沙门氏(Salmonella typhimurium)的情况下,当起始污染量为1.4 CFU/mL时,37℃培养6 h即可检出.在30份肉类样品中,有3份检出了大肠杆菌 O157:H7.本研究建立的多重 PCR 方法可特异、灵敏地实现对大肠杆菌 O157:H7 的检测.     

试论野生稻资源遗传多样性原生境保存

我国野生稻资源丰富,分布地域广阔,由于经济建设用地需要,近年来野生稻原生地遭到严重破坏,野生稻原生境保存已是十分紧迫的事情。本文论述了原生境保存的意义,原生境保存地的选择原则及设想,旨在提高全民生态保护意识,加强野生稻资源保护。     

In situ nitrogen removal in phase-separate bioreactor landfill

The feasibility of in situ nitrogen removal in phase-separate bioreactor landfill was investigated. In the experiment, two sets of bioreactor landfill systems, namely conventional two-phase and in situ nitrogen removal bioreactor landfills, were operated. The in situ nitrogen removal bioreactor landfill (NBL) was comprised of a fresh-refuse filled reactor (NBLF), a methanogenic reactor (NBLM) and a nitrifying reactor (NBLN), while the two-phase bioreactor landfill (BL) used as control was comprised of a fresh-refuse filled reactor (BLF) and a methanogenic reactor (BLM). Furthermore, the methanogenic and nitrifying reactors used aged refuse as bulk agents. The results showed that in situ nitrogen removal was viable by phase-separation in the bioreactor landfill. In total 75.8 and 47.5 g of nitrogen were, respectively, removed from the NBL and the BL throughout the experiment. The methanogenic reactor used the aged refuse as medium was highly effective in removing organic matter from the fresh leachate. Furthermore, the aged refuse was also suitable to use as in situ nitrification medium. The degradation of fresh refuse was accelerated by denitrification in the initial stage (namely the initial hydrolyzing stage) despite being delayed by denitrification in a long-term operation.     

原位杂交检测microRNA-205在乳腺癌中的表达

目的探讨microRNA-205表达与乳腺恶性病变的关系。方法乳腺疾病及癌组织芯片原位杂交分析microRNA-205的表达;实时定量RT-PCR方法检测正常乳腺细胞株、恶性程度不同的乳腺癌细胞株中microRNA-205的表达。结果原位杂交分析显示,36例正常与良性乳腺病变中,33例(91.67%)表达阳性;36例乳腺癌中,23例(63.89%)表达阳性。microRNA-205的表达在乳腺正常与良性病变中的表达较恶性病变中高且有统计学差异(P=0.011),但与乳腺癌TNM分期、临床分期无关(P0.05)。实时定量RT-PCR结果显示,四个高度恶性乳腺癌细胞株(MDA-MB-231、HS578T、BT549和SUM159PT)中microRNA-205的表达较永生化正常乳腺上皮细胞株MCF10A和四个低度恶性细胞株(MDA-MB-468、T-47D、ZR-75-1和SKBR3)中为低(P0.05)。结论原位杂交适用于microRNA-205的表达分析;组织芯片标本原位杂交与乳腺细胞株实时定量RT-PCR分析结果提示,microRNA-205可能参与了乳腺癌的发生、发展,并随着乳腺癌的演进呈下调趋势。     

In situ hybridization to somatic metaphase chromosomes of potato

Summary An in situ hybridization procedure was developed for mitotic potato chromosomes by using a potato 24S rDNA probe. This repetitive sequence hybridized to the nucleolar organizer region (NOR) of chromosome 2 in 95%–100% of the metaphase plates. Another repetitive sequence (P5), isolated from the interdihaploid potato HH578, gave a ladderpattern in genomic Southern's of Solanum tuberosum and Solanum phureja, but not in those of Solanum brevidens and two Nicotiana species. This sequence hybridized predominantly on telomeric and centromeric regions of all chromosomes, although chromosomes 7, 8, 10 and 11 were not always labeled clearly.     

In situ bioremediation of monoaromatic pollutants in groundwater: a review

Monoaromatic pollutants such as benzene, toluene, ethylbenzene and mixture of xylenes are now considered as widespread contaminants of groundwater. In situ bioremediation under natural attenuation or enhanced remediation has been successfully used for removal of organic pollutants, including monoaromatic compounds, from groundwater. Results published indicate that in some sites, intrinsic bioremediation can reduce the monoaromatic compounds content of contaminated water to reach standard levels of potable water. However, engineering bioremediation is faster and more efficient. Also, studies have shown that enhanced anaerobic bioremediation can be applied for many BTEX contaminated groundwaters, as it is simple, applicable and economical.

This paper reviews microbiology and metabolism of monoaromatic biodegradation and in situ bioremediation for BTEX removal from groundwater under aerobic and anaerobic conditions. It also discusses the factors affecting and limiting bioremediation processes and interactions between monoaromatic pollutants and other compounds during the remediation processes.     

In situ electrochemical assessment of cytotoxicity of chlorophenols in MCF-7 and HeLa cells

An in situ electrochemical method was used to assess the cytotoxicity of chlorophenols using human breast cancer (MCF-7) and cervical carcinoma (HeLa) cells as models. On treatment with different chlorophenols, the electrochemical responses of the selected cells, resulting from the oxidation of guanine and xanthine in the cytoplasm, indicated the cell viability. In addition, the in situ in vitro electrochemical method was further compared with the traditional MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) assays. Although similar cytotoxicity data were obtained from both methods, the effective concentrations of chlorophenols that inhibited 50% cell growth (EC₅₀ values) from the electrochemical method were only slightly lower than those from the MTT assay. These results indicate that the in situ in vitro electrochemical method paves a simple, rapid, strongly responsive, and label-free way to the cytotoxicity assessment of different chlorophenol pollutants.     

化学发光杂交进行菌落克隆的原位筛选

用化学发光杂交试剂代替３２Ｐ进行菌落原位筛选重组Ｐ５３阳性克隆,可减少同位素的放射性损害和污染及半衰期短等缺点．本方法实验周期短、特异性可和同位素相当,可用于重组目的基因的原位杂交筛选．