密码子优化的人H5N1流感病毒HA基因在哺乳动物细胞中获得高效表达

为了提高人禽流感病毒血凝素HA的表达量,应对流感大流行疫苗的需求,按照人的偏爱密码子将H5N1(A/Anhui/1/2005)流感病毒的HA基因进行优化改造,经全基因合成后插人到真核表达载体pDC315中,构建了真核表达质粒pDC315-Mod.HA;将此质粒和含野生HA基因的真核表达质粒pDC315-Wt.HA分别转染293T细胞,比较HA蛋白的表达量.结果表明:经间接免疫荧光实验及Western blot实验比较和鉴定,密码子优化后,HA蛋白在293T细胞中的表达水平显著提高,为流感大流行疫苗的研究打下了基础.     

流感病毒H1N1血凝素基因和神经氨酸酶基因在酵母菌中的表达

在成功克隆流感病毒H1N1全长HA(Hemagglulinin,HA)、NA(Neuramidinase,NA) 基因并测序的基础上,将部分基因序列克隆到表达载体pMETA上,构建了重组表达质粒pMETA/HA(52~1 557 bp)、pMETA/NA(121~1 263 bp),电转化真核酵母菌pMAD16,甲醇诱导表达,利用Ni2+亲和层析柱对重组蛋白进行纯化,并用Western blotting和ELISA方法检测其抗原性。SDS-PAGE显示重组蛋白在酵母菌中可以高效表达,蛋白纯度占总蛋白的95％以上,ELISA和Western blotting实验证实,重组蛋白具有良好的抗原性。成功克隆和表达了流感病毒H1N1 HA、NA基因序列,为流感病毒H1N1诊断试剂和疫苗的开发等进一步的研究提供了参考。     

H5N1亚型禽流感病毒NS1基因的克隆及其诱导肺腺癌细胞A549凋亡的研究

通过RT-PCR的方法克隆H5N1亚型禽流感病毒NS1基因,并构建了真核表达载体pCMV-Myc/NS1。将此真核表达质粒转染肺腺癌细胞A549,48 h后,经Western印迹检测,NS1基因能在细胞中正确表达。经荧光显微镜、透射电镜观察和流式细胞仪检测,发现该株流感病毒的NS1蛋白可诱导肺腺癌细胞A549凋亡。     

甲型H1N1流感病毒HA基因在昆虫细胞中的截短表达

目的:利用Bac-to-Bac Baculovirus Expression System表达重组HA蛋白,Western blot及IFA方法鉴定其表达。方法:采用PCR方法扩增A/California/04/2009(H1N1)HA基因,将其克隆到pFastBacHT A载体上,重组质粒pFastBacHT-HA经双酶切及测序鉴定正确后,转化阳性重组载体进入E.coli DH10Bac感受态细胞中,通过Bluo-gal蓝白斑筛选、PCR鉴定获得重组转座子rBacmid-HA。从重组转座子中提取rBacmid-HA质粒DNA转染sf 9昆虫细胞,制备重组杆状病毒。重组杆状病毒感染sf 9细胞表达重组蛋白,Western blot及IFA鉴定重组蛋白表达情况。结论:成功构建了甲型H1N1流感病毒HA基因的昆虫杆状病毒表达载体,该表达载体转染昆虫细胞后制备的重组杆状病毒病毒滴度较高,重组杆状病毒表达的重组蛋白经Western blot 及IFA 鉴定后具有良好的免疫反应原性。     

人星状病毒非结构蛋白基因nsP1a/1真核表达载体构建及其

目的 将人星状病毒非结构蛋白nsP1 a./1基因连接到真核表达载体上,转染人胚肾上皮细胞48 h后检测其表达.方法 设计特异性引物PCR扩增人星状病毒非结构蛋白nsP1 a/1片段,分别插入真核表达载体pcDNA3.1(+)和pEGFP-N2载体,构建重组表达质粒pcDNA3.1(+)-nsP1a/1-His和pEGFP-N2-nsP1a/1.在转染试剂PEI的介导下将重组表达质粒分别转染293T细胞,转染48 h后分别在荧光显微镜下观察EGFP的表达以及通过Western blot检测nsP1a/1基因的表达.结果 重组表达质粒pcDNA3.1(+)-nsP1a/1-His和pEGFP-N2-nsP1a/1构建成功;转染pEGFP-N2-nsP1a/1后48 h能够在荧光显微镜蓝色激发光下观察到较强的黄绿色荧光;转染pcDNA3.1(+)-nsP1a/1-His后48 h收集细胞进行Western blot检测,能够检测到nsP1a/1-His融合报告基因的表达.结论 成功构建了人星状病毒非结构蛋白nsP1a/1基因真核表达质粒,并在人胚肾上皮细胞293T细胞获得表达,为进一步深入研究nsP1a/1在人星状病毒抵御宿主细胞抗病毒天然免疫中是否发挥作用奠定了基础.     

准噶尔小胸鳖甲抗冻蛋白MpAFP698在真核细胞中的表达与鉴定

目的:构建真核表达质粒pEGFP-N1-mpafp698,转染人胚肾293T细胞,并表达准噶尔小胸鳖甲抗冻蛋白MpAFP698.方法:PCR扩增出mpafp698序列,将其克隆入本室保存的真核表达载体pEGFP-N1中,转染293T细胞;利用RT-PCR、流式细胞仪、免疫荧光、Western 印迹检测蛋白表达.结果:构...     

H9N2亚型禽流感病毒HA基因在昆虫细胞中的表达

为了获得具有良好免疫活性的H9N2亚型禽流感病毒HA蛋白,本研究利用Bac-to-Bac昆虫-杆状病毒表达系统对H9N2亚型禽流感病毒HA蛋白进行表达。运用PCR对H9N2亚型禽流感病毒HA基因进行扩增,将HA基因连接于转移载体pFastBacDual的BamHⅠ和HindⅢ两个酶切位点之间,构成pFastBacDual-HA重组载体;将pFastBacDual-HA转化至大肠杆菌DH10Bac感受态细胞,利用蓝白斑筛选法和PCR方法对阳性菌落筛选重组杆粒Bacmid-HA;重组杆粒Bacmid-HA对Sf9昆虫细胞进行了转染,获得重组杆状病毒rBV-HA;运用SDS-PAGE电泳和Western blotting分析rBV-HA感染的细胞和细胞上清。结果表明,重组HA蛋白大小约为65 kD;Western blotting分析显示,HA蛋白与免疫H9N2禽流感病毒后获得的阳性血清具有良好的特异性反应,为进一步研制针对HA蛋白的H9N2亚型AIV亚单位疫苗和研发H9亚型ELISA抗体检测试剂盒奠定了基础。     

人源跨膜蛋白43(TMEM43)的检测、细胞内定位及体外真核表达

为探究人源跨膜蛋白43(TMEM43)基因含量、定位分布及体外真核表达情况,利用RT-PCR及Western blot方法分别检测内源MRC-5和HEK293细胞内TMEM43基因及其蛋白表达情况,采用间接免疫荧光实验进一步分析其在MRC-5细胞内的分布;构建重组表达载体pcDNA3.1-EGFP-TMEM43,转染至HEK293细胞内检测外源TMEM43在HEK293细胞内的基因和蛋白表达情况。结果显示,基因水平TMEM43在MRC-5细胞内的表达明显高于HEK293细胞,蛋白水平仅能检测到MRC-5细胞内TMEM43的表达。重组表达质粒pcDNA3.1-EGFP-TMEM43转染HEK293细胞后,基因水平TMEM43表达显著升高, Western blot可检测到转染后细胞内TMEM43蛋白成功表达。结果表明,不同细胞表达TMEM43含量存在差异,肺来源细胞内TMEM43的表达明显高于肾来源的细胞;构建的重组载体pcDNA3.1-EGFP-TMEM43可成功转染HEK293细胞并表达。该研究为TMEM43结构及功能、与疾病相关机理的进一步探究提供了实验依据。     

PDX-1表达质粒的构建及表达

目的:为进一步研究PDX-1基因的功能打下基础.方法:从人的胰腺cDNA中PCR扩增PDX-1基因的阅读框架,构建质粒pAAV-PDX-1.用pAAV-PDX-1转染293T细胞48小时后,用RT-PCR和Western Blot方法检测293T细胞中mRNA和蛋白水平PDX-1的表达.结果:转染了pAAV-PDX-1的293T细胞中有PDX-1的表达,而在转染质粒pAAV-MCS和未转染的293T细胞中均没有检测到PDX-1的表达.结论:构建的pAAV-PDX-1质粒在mRNA和蛋白水平都能表达PDX-1.     

利用靶定基质蛋白基因m的小干扰RNA抑制2009甲型H1N1流感病毒的复制

目的:设计、构建并筛选针对流感病毒基质蛋白基因m的小干扰RNA(siRNA),检测其对2009甲型H1N1流感病毒复制的抑制效果。方法:设计3条针对流感病毒m基因的siRNA,并克隆到短发夹型(shRNA)siRNA表达载体pSilencer2.1-U6-hygro上;经测序证明构建成功后,将表达3种siRNA的质粒和阴性对照质粒psiRNA-control分别转染MDCK细胞,用潮霉素筛选稳定表达细胞株,用H1N1流感病毒感染细胞,通过Real-time PCR和Western印迹检测干扰效果。结果:构建了3个针对流感病毒m基因的siRNA表达质粒,3种siRNA均使m基因的mRNA水平降低,其中M1-306的抑制效率达60%;3种siRNA均使流感病毒NA蛋白的表达量降低,M2-25、M1-105的抑制效率明显,M1-306略低。结论:针对m基因的siRNA可以有效抑制流感病毒在MDCK细胞中的复制。     

NPC1L1:固醇脂质吸收的关键蛋白质

NPC1L1是最近发现的一种与NPC1同源的蛋白质。在体内的分布有物种差异性,其亚细胞定位存在很大争议。近些年发现NPC1L1在固醇类脂质代谢途径中起着重要作用,是肠道吸收固醇类脂质尤其是胆固醇的关键蛋白质,这项新发现使得人们对固醇类脂质的吸收机制有了了解。高胆固醇血症是心血管系统疾病的一个高危因子,因此,对NPC1L1的研究具有重大的实际意义,正逐渐成为研究的热点。     

达菲药物对H1N1病毒作用研究

甲型H1N1病毒在全世界范围内爆发,引起人们广泛关注,而目前疫苗和新的药物正处于研发阶段,与此同时该病毒神经氨酸酶蛋白序列不断被报道。达菲作为治疗H1N1病毒的药物被患者广泛使用。通过同源性建模的方法比较神经氨酸酶的变异情况,从而预测达菲药物对变异前后的作用效果评价。通过AUTODOCK计算结合能,发现达菲药物与神经氨酸酶的结合能维持在2.4～4.2 kJ/mol范围内,动力学常数最高值达到18.2 mM。证明达菲药物对抑制病毒进入寄主细胞有明显效果。     

Isolation and Characterization of Ubiquitin-activating Enzyme E1-domain Containing 1, UBE1DC1

Ubiquitin and other ubiquitin-like proteins play important roles in post-translational modification. They are phylogenetically well-conserved in eukaryotes. Activated by other proteins, ubiquitin and ubiquitin-like proteins can covalently modify target proteins. The enzymes responsible for the activation of this modification have been known to include UBA1, SAE2, UBA3, SAE1 and ULA1. Here we report a new ubiquitin activating enzyme like cDNA, named ubiquitin activating enzyme E1-domain containing 1 (UBE1DC1), whose cDNA is 2654 base pairs in length and contains an open reading frame encoding 404 amino acids. The UBE1DC1 gene consists of 12 exons and is located at human chromosome 3q22. The result of RT-PCR showed that UBE1DC1 is expressed in most of human tissues. These two authors contributed equally to this paper. The nucleotide sequence reported in this paper has been submitted to GenBank under accession number AY253672.     

Association of SULT1A1 and UGT1A1 polymorphisms with breast cancer risk and phenotypes in Russian women

Estrogens are critical for breast cancer initiation and development. Sulfotransferase 1A1 (SULT1A1) and UDP-glucuronosyltransferase 1A1 (UGT1A1) conjugate and inactivate both estrogens and their metabolites, thus preventing estrogen-mediated mitosis and mutagenesis. SULT1A1 and UGT1A1 are both polymorphic, and different alleles encode functionally different allozymes. We hypothesize that low-activity alleles SULT1A1*2 and UGT1A1*28 are associated with higher risk for breast cancer and more severe breast tumor phenotypes. We performed a case-control study, which included 119 women of Russian ancestry with breast cancer and 121 age-matched Russian female controls. We used PCR followed by pyrosequencing to determine the SULT1A1 and UGT1A1 genotypes. Allele UGT1A1*28 was present at a higher frequency than the wild-type UGT1A1*1 allele in breast cancer patients as compared to controls (P = 0.002, OR = 1.79, CI 1.23–2.63). Consistently, the frequency of genotypes that contain allele UGT1A1*28 in the homozygous or the heterozygous state was greater in breast cancer patients as compared with the frequency of the wild-type UGT1A1*1/*1 genotype (P = 0.003, OR = 4.00, CI 1.49–11.11 and P = 0.014, OR = 2.04, CI 1.14–3.57, respectively). Individuals carrying allele UGT1A1*28 in the homo-or heterozygous state had larger breast tumors (>2 cm) as compared to the group with high-activity genotypes (P = 0.011, IR = 3.44, CI 1.42–8.36). No association was observed between any of the SULT1A1 genotypes and breast cancer risk or phenotypes. Our data suggest that UGT1A1, but not SULT1A1, genotypes are important for breast cancer risk and phenotype in Russian women. Published in Russian in Molekulyarnaya Biologiya, 2006, Vol. 40, No. 2, pp. 263–270. The article was translated by the authors.     

Upregulation of MAPKAPK5-AS1, PXN-AS1 and URB1-AS1 lncRNAs in non-functioning pituitary adenoma

Long non-coding RNAs (lncRNAs) have been shown to be dysregulated in a variety of malignant and non-malignant lesions including non-functioning pituitary adenomas (NFPAs). In the current experimental study, we have selected six lncRNAs, namely MAPKAPK5-AS1, NUTM2B-AS1, ST7-AS1, LIFR-AS1, PXN-AS1 and URB1-AS1 to assess their expression in a cohort of Iranian patients with NFPA. MAPKAPK5-AS1, PXN-AS1 and URB1-AS1 were shown to be over-expressed in NFPA tissues compared with control samples (Expression ratios (95% CI) = 10 (3.94–25.36), 11.22 (4.3–28.8) and 9.33 (4.12–21.12); p values < 0.0001, respectively). The depicted ROC curves showed the AUC values of 0.73, 0.80 and 0.73 for MAPKAPK5-AS1, PXN-AS1 and URB1-AS1, respectively. Relative expression level of PXN-AS1 was associated with tumour subtype (p value = 0.49). Besides, relative expression levels of MAPKAPK5-AS1 and LIFR-AS1 were associated with gender of patients (p values = 0.043 and 0.01, respectively). Cumulatively, the current study indicates the possible role of MAPKAPK5-AS1, PXN-AS1 and URB1-AS1 lncRNAs in the pathogenesis of NFPAs.