中间偃麦草染色体2Ai-2特异PCR新标记的建立和St基因组特异序列的克隆

中间偃麦草麦、小麦和小麦－中间偃麦草2Ai－2附加系Z1、Z2、X6,代换系ZD28等进行RAPD分析,从320个RAPD引物中,鉴定出2Ai－2染色体特异的2个RAPD标记OPO05650和OPMO414000。利用这2个特异OPO05和OPM04,PCR扩增普通小麦CS（ABD）及其近缘植物中间偃麦草（E1E2St）、拟鹅冠草（St）,长穗偃麦草（E）、簇毛麦（V）、黑麦（R）、大麦（H）粗山羊草（D）等基因组DNA。结果表明,OPO05650和OPO41400均是2Ai－2染色体上St基因组区域的特异标记。将上棕2个特异片段分离回收、克隆、测序,根据测序结果重新设计、合成特异引物,成功地转换RAPD标记为SCAR（sequence characterizked amplifed region）标记SC－05和SC－M4。利用SCAR标记对不同材料进行分析的结果表明,凡含有2Ai－2染色体的抗黄矮病材料及拟鹅冠草均产生一条扩增带,不含2Ai－2染色体的材料,包括小麦、长穗麦草、簇毛麦、黑麦、在麦、粗山羊草以有含有其他他中间偃麦草染色休的附加系,均没有扩增产物,说明上棕2个SCAR标记是中间偃麦草2Ai－2染色体的特异性PCR标记,且是2Ai－2染色体上St基因组区域的特异性标记。克隆与鉴定中间偃麦草的2个SCAR扩增片段TiSCO5和TiSCM4。结果表明,克隆的中间偃麦草TiSCO5和TiSCM4特异片段,分别是St基因组特异性的寡拷贝序列有多拷贝重复序列,为St基因组遗传研究的新探针。     

小麦族中含St染色体组物种的特异分子标记的建立

以拟鹅观草(Pseudoroegneria spicata)、偏凸山羊草(Aegilops ventricosa)、二倍体簇毛麦(Dasypyrum villosum)、荆州黑麦(Secale cereale cv. Jingzhou rye)、普通小麦中国春(Chinese Spring)等15个物种为材料, 用200条10碱基随机引物进行RAPD分析, 筛选到拟鹅观草基因组中1个542 bp的特异DNA片段(GenBank登录号为DQ992032), 命名为OPH11542。根据OPH11542设计特异引物, 对小麦族物种进行PCR扩增, 发现拟鹅观草可以扩增出OPH11542以及分子量分别为742 bp (GenBank登录号为DQ992033, 记为OPH11742)和743 bp (GenBank登录号为EF014218, 记为OPH11743)的DNA片段, 而其他材料均未扩增出这3个片段。经序列比对结合多个软件的分析结果认为该3个片段为同一类新重复序列。利用特异引物对15份含St染色体的物种进行扩增, 发现含StY染色体组的物种均能扩增出OPH11742或OPH11743, 而含StH染色体组的物种均能扩增出OPH11542。这表明St染色体组在与其它染色体组组合形成多倍体的过程中往往会出现不同程度的重组或修饰。OPH11542、OPH11742和OPH11743可以作为检测St染色体的分子标记。     

St基因组中的CRW同源序列在偃麦草中的FISH分析

为了确定十倍体长穗偃麦草(Thinopyrum ponticum, Liu & Wang)和六倍体中间偃麦草(Th. intermedium, [Host] Barkworth & Dewey )的基因组组成, 根据野生一粒小麦(Triticum boeoticum)着丝粒自主型反转录转座子(CRW)序列设计特异引物, 以二倍体拟鹅观草(Pseudoroegneria spicata, Á Löve )基因组 DNA为模板进行PCR扩增, 筛选到一条St基因组着丝粒区相对特异反转录转座子的部分序列pStC1, 长度为1.755 kb (GenBank登录号: FJ952565), 其中有800 bp与小麦着丝粒反转录转座子(CRW)的LTR区高度同源, 另有小部分片段与其外壳蛋白编码基因(gag)部分同源, 并且包含一段富含AGCAAC碱基的重复序列。以pStC1为探针, 对十倍体长穗偃麦草的FISH检测结果显示其基因组组成为两个St组3个E组(St₁St₂E^eE^bE^x); pStC1与中间偃麦草杂交时, 不仅St基因组上有强烈的荧光信号, 而且E基因组一些染色体的近着丝粒区域也有杂交信号, 说明偃麦草属异源多倍体物种在其形成及进化过程中St与E基因组之间在着丝粒及近着丝粒相关区域可能存在协同进化。     

普通小麦-中间偃麦草TAI-27中附加染色体的显微切割及特异性探针的筛选

试验以长穗偃麦草基因组DNA为探针 ,与普通小麦 中间偃麦草TAI 2 7进行染色体原位杂交 ,表明有 4条与长穗偃麦草同源的染色体 ;以P .stipifolia (St)基因组DNA为探针 ,有 4条与St同源的染色体 .这说明TAI 2 7中有 4条St染色体 .TAI 2 7是异代换 附加系 .对TAI 2 7中附加的中间偃麦草染色体进行显微切割 ,并建立其微克隆库 ,从中筛选获得了中间偃麦草的特异性探针 ,同源性分析表明该序列为一新序列 .这为进一步筛选抗病、抗逆和优质基因打下基础 .     

应用原位杂交及RAPD技术标记抗黄矮病小麦—中间偃麦草染色体异附加系

以生物素标记中间偃麦草基因组ＤＮＡ为探针,与抗黄矮病小麦－中间偃麦草染色体异附加系Ｚ６进行原位杂交,鉴定出附加的１对中间偃麦草染色体。对异附加系Ｚ６和Ｌ１及它们的小麦亲本进行了ＲＡＰＤ分析,从１２０个随机引物中,筛选出２个引物可以扩增出附加染色体的特异ＤＮＡ片段,可作为鉴定导入小麦的中间偃麦草染色质的分子标记。     

应用原位杂交及RAPD技术标记抗黄矮病小麦一中间偃麦草染色体异附加系

以生物素（Ｂｉｏｔｉｎ－１６－ｄＵＴＰ）标记中间偃麦草基因组 ＤＮＡ为探针,与抗黄矮病小麦－中间偃麦草染色体异附加系Ｚ６进行原位杂交,鉴定出附加的１对中间偃麦草染色体。对异附加系 Ｚ６和 Ｌ１及它们的小麦亲本进行了 ＲＡＰＤ分析,从 １２０个随机引物中,筛选出 ２个引物可以扩增出附加染色体的特异ＤＮＡ片段,可作为鉴定寻人小麦的中间偃麦草染色质的分子标记。     

抗条锈病小偃麦双体异附加系山农87074-519的鉴定

综合利用抗性接种鉴定、细胞学分析、SSR分子标记和基因组原位杂交(GISH)技术相结合的方法,对从长穗偃麦草与小麦复合杂交后代中选育的抗条锈病种质系山农87074-519进行了鉴定。结果表明,山农87074-519的根尖细胞染色体数目2n=44,花粉母细胞减数分裂中期I(PMCMI)绝大多数细胞内可观察到22个二价体,平均染色体构型2n=44=21.82Ⅱ 0.36Ⅰ,它与普通小麦中国春杂种F1的多数花粉母细胞内染色体构型为2n=21Ⅱ 1Ⅰ,因此它是1个附加了1对长穗偃麦草染色体的双体异附加系;以假鹅冠草St基因组总DNA作探针进行原位杂交发现山农87074-519的44条染色体中有2条出现黄绿色杂交信号,且杂交信号遍布整条染色体,证明其附加的长穗偃麦草染色体为St基组;利用SSR分子标记技术,在170对SSR引物中筛选出特异引物BARC165,它能稳定地在山农87074-519中扩增出长穗偃麦草特异标记BARC165268;将长穗偃麦草中BARC165的特异扩增片段克隆测序后制备成探针进行原位杂交,可在山农87074-519的间期染色体和有丝分裂中期染色体检测到杂交信号。山农87074-519综合农艺性状较好,对条锈病免疫,其抗性基因为显性,且位于附加的长穗偃麦草St基组染色体上,暂将其表示为YrSt。该种质系在小麦的遗传改良中具有重要利用价值。     

大麦1H特异性CAPs标记和ASA标记的创制

选取大麦1H染色体的STS标记MWG913特异性扩增小麦,把得到的片段进行克隆.用Taq酶切分类并测序,把得到的序列同大麦的序列进行比较.依据比较结果,选取对大麦特异的内切酶,用该酶来酶切大麦、小麦、黑麦、长穗偃麦草、中间偃麦草、簇毛麦的MWG913扩增产物,获得对大麦1H染色体特异的CAPs标记.同时,依据酶切位点碱基的差异设计引物对扩增的产物进行第二次扩增,得到该位点的一对染色体特异性ASA标记.     

巨穗小麦种质中外源遗传物质的细胞遗传学和分子生物学鉴定

利用C分带、基因组原位杂交并结合分子生物学手段,对12份巨穗小麦种质材料中的外源遗传物质进行了检测.结果表明,12份材料染色体数均为42,其中5份材料均具有一对小麦-黑麦(Triticum aestivum-Secalecereal)1BL/1RS易位染色体和一对中间偃麦草(Agropyron intermedium Garten)染色体、3份材料只具有一对中间偃麦草染色体、3份材料只具一对1BL/1RS染色体、1份材料无1BL/1RS和中间偃麦草染色体.进一步细胞学分析表明,此中间偃麦草染色体代换了普通小麦(Triticum aestivum L.)中的2D染色体,因其良好的同源补偿性,表示为2Ai.同时对2Ai在巨穗小麦种质中存在的遗传学意义及小麦遗传改良中的应用进行了讨论.     

多年生小麦杂种F5代分子细胞遗传学鉴定

对利用八倍体小偃麦和中间偃麦草杂交获得的多年生小麦杂种F5代中选育的15份材料进行形态学观察和分子细胞遗传学检测。结果表明,大部分材料均含有E组和St组染色体或染色体片段。其中,8份中间型(小偃麦类型)材料具有双亲性状,根系发达、植株繁茂、分蘖多、抗逆性强等;但染色体数目仍不稳定,介于42-56之间,有6份材料具有再生性;7份普通小麦型材料染色体数在41-43之间,虽无再生性,但含有中间偃麦草染色体或染色体片段,具有大穗多花、抗病等特性,可能为E或St组染色体代换或易位材料。以上结果表明决定多年生小麦再生性、抗寒性和多年生特性的基因主要存在于部分E和St染色体上。     

Microdissection of additional chromosome in common wheat-Th.intermedium TAI-27 and screening of its special probe

It was identified that there were 4 St chromosomes derived from Th.intermedium in common wheat-Th.intermedium alien additional line TAI-27 by in situ hybridization.Two St chromosomes added to wheat chromosome in TAI-27 as well as two of them replaced two of 42 in wheat chromosomes.This indicates that TAI-27 is not only an alien additional line,but also a replacing line.The additional chromosomes in TAI-27 were microdissected and a microcloning library was constructed.A special probe of Th.intermedium was obtained from a microcloning library.The sequence analysis indicated that there were no homology with Genebank data.This makes it possible to screen genes with the disease-resistance,adversity-tolerance and fine character from Th.intermedium.     

Microdissection of additional chromosome in common wheat-Th. intermedium TAI-27 and screening of its special probe

It was identified that there were 4 St chromosomes derived from Th, intermedium in common wheat-Th. intermedium alien additional line TAI-27 by in situ hybridization. Two St chromosomes added to wheat chromosome in TAI-27 as well as two of them replaced two of 42 in wheat chromosomes. This indicates that TAI-27 is not only an alien additional line, but also a replacing line. The additional chromosomes in TAI-27 were microdissected and a microcloning library was constructed. A special probe of Th. intermedium was obtained from a microcloning library. The sequence analysis indicated that there were no homology with Genebank data. This makes it possible to screen genes with the disease-resistance, adversity-tolerance and fine character from Th.intermedium.     

Molecular Cytogenetic Identification of a Wheat-Thinopyron intermedium (Host) Barkworth & DR Dewey Partial Amphiploid Resistant to Powdery Mildew

Wide cross and molecular cytogenetic methods were used to transfer the powdery mildew resistance gene from Thinopyron intermedium (Host) Barkworth & DR Dewey to wheat. Among the progeny of crossing common wheat (Triticum aestivum L.) Yannong 15 with Th. intermedium, a partial amphiploid E990256, with resistance to powdery mildew, was developed. It had 56 chromosomes and could form 28bivalents in pollen mother cells at metaphase I of meiosis. Resistance verification by race 15 at the seedling stage and by mixed strains of Erysiphales gramnis DC. f. sp. tritici Em. Marchal at the adult stage showed it was immune to powdery mildew at both stages. Gene postulation via 21 isolates of E. gramnis f. sp. tritici and 29 differential hosts showed it was nearly immune to all the isolates used, and its resistance pattem was different from all the mildew resistance genes used, which indicated it probably contained a new resistance gene to powdery mildew. Biochemical verification showed it might convey different Th. intermedium chromosomes from those of the wheat-Th. intermedium partial amphiploids Zhong 1-5. Genomic in situ hybridization analysis by using St genomic DNA as the probe showed E990256 contained a recombination genome of St and E.     

小偃麦附加系Z1和Z2中外源染色体2Ai-2的结构组成

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Characterization of a partial wheat-Thinopyrum intermedium amphiploid and its reaction to fungal diseases of wheat

Partial amphiploids between wheat (Triticum aestivum L.) and Thinopyrum species play an important role in the transfer and use of traits from alien species. A wheat-Thinopyrum intermedium partial amphiploid, TAI8335, and its alien parent were characterized by a combination of genomic in situ hybridization (GISH) and cytological observations. Evidence from GISH indicated that the donor parent Th. intermedium possessed seven pairs of S, seven J(s) and 21 J chromosomes. Mitotic observation showed that the majority of TAI8335 plants had 56 chromosomes, but a few had 54 to 55, in some cases with two to three additional telochromosomes. The chromosomes in most pollen mother cells of plants with 2n = 56 formed 28 bivalents, averaging 27.12 in 223 cells, suggesting a basic cytological stability. Sequential GISH patterns using genomic Pseudoroegneria spicata and genomic Th. intermedium DNA as probes revealed that TAI8335 had fourteen chromosomes derived from Th. intermedium and its alien genome consisted of one pair of S-, three pairs of J(s) - and one pair of J-genome chromosomes as well as two translocated chromosome pairs, one being a Robertsonian translocation and another an intercalary translocation, both of which involved J and S genome. Two of the telochromosomes in the aneuploid plants originated from the J genome and one from wheat. Disease screening demonstrated this line was highly resistant to leaf rust, stem rust, stripe rust and powdery mildew. This study showed that the partial amphiploid TAI8335 appears to serve as a novel source for the transfer of resistance genes for multiple fungal pathogens to wheat.     

携带抗黄矮病基因的中间偃麦草染色体2Ai_2特异的分子标记

The wheat-Thinopyrum intermedium addition lines Z1,Z2 contain a pair of Th. intermedium chromosomes 2Ai-2 carrying the gene with resistance to barley yellow dwarf virus (BYDV). Genomic in situ hybridization (GISH) was used to analyze the chromosome constitution of Z1,Z2 by using genomic DNA probes from Th. intermedium and Pseudoroegneria strigosa. The results showed that the chromosome constitution of either Z1 or Z2 composes of 42 wheat chromosomes and two Th. intermedium chromosomes (2Ai-2). The 2Ai-2 chromosome is St-E intercalary translocation, in which the E genomic chromosome segment translocated into the middle region of the long arm of chromosome belonging to St genome. With the genomic DNA probe of Ps. strigosa, the GISH pattern specific to the 2Ai-2 chromosome may be used as a molecular cytogenetic marker. A detailed RFLP analysis on Z1, Z2 and their parents was carried out by using 12 probes on the wheat group 2 chromosomes. Twenty RFLP markers specific to the 2Ai-2 chromosome were identified. Two RAPD markers of OPR16 –350 and OPH09 -1580, specific to the 2Ai-2 chromosome, were identified from 280 RAPD primers. These molecular markers could be used to assisted-select translocation lines with small segment of the 2Ai-2 chromosome and provide tools to localize the BYDV resistance.