同域分布红腹锦鸡和红腹角雉在不同空间尺度下的生境分化

生境分化是群落物种缓解种间竞争压力,实现同域稳定共存的重要途径,是群落生态学领域的重要研究内容。同域动物的生境分化是空间尺度依赖的生态过程,从不同空间尺度分层研究物种的生境分化,对于全面了解同域动物的共存模式和机制,以及实现多物种整合保护都具有重要意义。2018年1月至8月,在四川白水河国家级自然保护区对同域分布的红腹锦鸡(Chrysolophus pictus)和红腹角雉(Tragopan temmminckii)进行了野外调查,基于MaxEnt模型和样方法,从宏生境和微生境两个空间尺度对其生境分化进行了研究。结果显示:1)在宏生境尺度,两种雉类的适宜宏生境重叠面积达44.59 km~2,分别占红腹锦鸡和红腹角雉适宜宏生境面积的58.73%和44.3%,表明二者在宏生境尺度上没有发生明显的种间分化;2)微生境尺度是两种雉类生境分化的关键尺度,海拔、坡位、最近水源距离和乔木层盖度4个特征上的显著差异,使二者的微生境发生显著的种间分化;3)虽然在不同空间尺度下具有不同的分化程度和方式,但两种雉类在海拔适应性、人为干扰耐受性以及对水源的依赖性上的差异在两个尺度下表现出了一定的一致性。此外,基于二者生境需求的异同,提出了控制人为干扰、加强宣传教育、维持自然植被多样性和镶嵌格局等针对该区域雉类物种共同保护的建议。     

不同生境和季节社鼠与大林姬鼠的微生境选择比较

微生境选择分化是生境相似的物种间共存的重要原因。社鼠和大林姬鼠为北京东灵山地区常见鼠种,生境需求、活动节律及食物组成等相似,但二者共存的原因尚不清楚。2016—2017年,我们对北京东灵山地区社鼠和大林姬鼠的微生境选择进行了研究。不同季节和生境类型中,社鼠和大林姬鼠微生境选择存在明显分化。灌丛生境中,春季社鼠偏好于乔木密度、草本盖度更高和落叶盖度相对偏低的微生境,而大林姬鼠选择郁闭度、落叶盖度较高而草本盖度较低的微生境;主成分分析表明,地表覆盖物是影响二者微生境选择的主要因素;秋季社鼠喜好乔木种类多、灌木密度和草本盖度更高的微生境,而大林姬鼠选择乔木胸径、灌木距离、落叶盖度和空地比例更高的微生境,食物丰富度是影响社鼠和大林姬鼠微生境选择的主要因素。弃耕地生境中,春季社鼠倾向于灌木密度和草本盖度较高的微生境,而大林姬鼠首选郁闭度、乔木胸径、落叶盖度较大而草本盖度较低的微生境,地表覆盖物是影响二者微生境选择的主要因素;秋季社鼠偏好郁闭度和落叶盖度都相对较低的微生境,大林姬鼠则相反,食物多度是影响二者微生境选择的主要因素。次生林生境中,春季因样本量太少,未作分析;秋季社鼠优先选择灌木密度、灌木基径和草本盖度更高的微生境,大林姬鼠更倾向乔木胸径、落叶盖度较高,而灌木密度、草本盖度较低的微生境,地表覆盖物是影响二者微生境选择的主要因素。结果表明,不同生境和季节,两种鼠的微生境选择具有明显分化,这可能是二者共存的重要原因之一。     

干旱河谷微生境变化对乡土植物幼苗定植的影响

干旱区植被斑块状分布格局引起的微生境差异对植被更新影响显著。气候变化和人类活动扰动下, 干旱区生态系统微生境多样化, 急需揭示乡土植物定植对不同微生境斑块变化的响应及其种间差异性, 并采用微生境调控技术促进退化生态系统植被恢复。该研究选择岷江干旱河谷区自然分布的灌木、半灌木和裸地微生境斑块, 采用移栽鞍叶羊蹄甲(Bauhinia brachycarpa)幼苗的试验方法, 揭示微生境变化对幼苗定植的影响; 进一步以极端退化的道路边坡为案例, 通过6种乡土植物种子直播试验探讨微生境调控技术及其对乡土植物幼苗定植的促进作用。结果显示, 在自然生态系统中, 裸地斑块上幼苗保存率和生物量显著大于植被斑块, 表明裸地微生境有利于幼苗定植; 养分添加仅对裸地斑块中幼苗生物量积累有促进作用。在裸地斑块中, 叶片生物量所占的比例和比叶面积较小, 相反根和茎生物量所占的比例较大。道路边坡上植被恢复试验结果显示, 6种乡土植物均能较好地适应土石混杂的边坡生境, 多数物种出苗率大于60%; 灌木幼苗保存率大于75%, 并且形成镶嵌式乡土灌草群落结构。地表覆盖和养分添加提高了边坡上种子出苗率和幼苗保存率, 促进了幼苗定植和结构稳定。该研究提供了有效促进工程边坡上乡土植物定植的方法, 可为干旱、半干旱生态系统退化荒坡和工程破坏地乡土植被恢复提供理论依据和技术指导。     

古尔班通古特沙漠藻类结皮中微生物群落空间分异特征

古尔班通古特沙漠短命和旱生植物在沙漠东西走向上形成明显的种群变化梯度,那么沙漠藻类结皮土壤中微生物是否也具有类似地空间分布特征?为研究该科学问题,采用高通量测序技术,探究沙漠东西走向上藻类结皮土壤中细菌和真菌群落结构分布规律。在古尔班通古特沙漠西部、中部和东部区域分别采集藻类结皮土样,进行土壤理化因子分析及细菌和真菌扩增子测序,对比不同区域土壤理化性质和微生物群落空间分异特征,分析微生物多样性与环境因子相关性,最后根据微生物物种种类对其功能进行预测分析。结果表明：藻类结皮土壤氮素、全磷、全钾、pH以及土壤化学计量比碳磷比(C∶P)和氮磷比(N∶P)在沙漠不同区域存在显著性差异,其余指标空间尺度上变化梯度较小。微生物α多样性结果显示3个区域藻类结皮土壤中细菌群落丰富度和多样性存在显著性差异,东部与西部区域产生明显分化;而真菌α多样性指数无显著性差异,群落结构较为均匀,未产生分化。β多样性结果显示细菌群落在西部与东部藻类结皮间存在显著性差异,沙漠中部为沙漠西部和东部的过渡带。门水平细菌优势菌群为蓝藻门、变形菌门和拟杆菌门;真菌为子囊菌门和担子菌门。属水平上,丰度前30个属在沙漠不同区域表现...     

巴丹吉林沙漠南缘植被物种多样性及其与土壤特性的关系

通过对巴丹吉林沙漠南缘地区植被的野外调查,探讨了植被物种组成与物种多样性对样地沿距沙漠中心的距离变化的响应,以及物种多样性与土壤因子间的关系。结果表明:(1)研究区主要物种共计10科18属20种,植物种类以沙漠旱生植物为主,样地的植被群落类型都是灌木与草本植物群落。(2)随着样地向沙漠外缘的延伸,植物种类和数量逐渐增多,群落结构更加复杂化和多样化;样地Shannon-Wiener指数和Simpson指数呈上升趋势,优势度指数逐渐下降;灌木层与样地的α多样性指数变化趋势一致,草本层变化幅度较小;β多样性指数中BrayCurtis指数呈下降趋势,说明植物群落之间的物种替换速率降低。(3)物种多样性指数与土壤因子的相关关系及逐步回归分析表明土壤有机质和土壤全氮含量对植被的影响显著,土壤表层20~40cm中的土壤速效磷与样地物种多样性和草本层物种多样性之间具有显著相关关系。     

Effects of the hummock–depression microhabitat on plant communities of alpine marshy meadows in the Yellow River Source Zone,China

黄河源区丘-洼微生境对高寒沼泽草甸植物群落的影响 黄河源区高寒沼泽草甸中有许多不均匀的小丘和洼地,形成了独特的微生境,深刻影响着植物特性和土壤养分含量。通过研究高寒湿地冻融丘和洼地空间异质性对植物群落和土壤性质的影响,可以深入了解微地形水文条件对丘-洼微生境空间波动的影响。本研究在黄河源区高寒沼泽湿地的冻融丘 (淹水和无淹水)和洼地(蓄水和无蓄水)共设置36个样地(1 m × 1 m),采集了45个植物样和225个土壤样, 并采用比较法评价高寒沼泽湿地是否存在“肥岛效应”。研究结果显示,冻融丘的存在增加了微生境的 空间异质性,促进了藏嵩草群落的物种多样性和土壤肥力。淹水和无淹水的冻融丘生境下的植物高度、 盖度、地上生物量、物种丰富度和多样性均显著高于湿地外围的高寒草甸。与高寒草甸相比,高寒沼泽 湿地丘-洼复合体为莎草科植物的生长提供了有利的微生境。另外,湿地丘-洼微生境与周围高寒草甸 在0–50 cm土层之间的比较表明,土壤有机碳和全氮距离地表越近含量越高。在深层次土壤中,丘洼微生 境与高寒草甸土壤养分之间的差距变小。因此,湿地丘-洼微生境形成了一个富饶的“肥沃岛”格局。这些研究结果有助于加深对高寒沼泽草甸生态系统恢复的认识。     

岷江上游干旱河谷植物群落分布的环境与空间因素分析

为了探讨土壤环境因子对植物群落物种数量、结构格局的影响 ,通过对岷江上游干旱河谷灌丛植被的大量群落学调查 ,采用了群落中 9个土壤特征指标 ,利用去势典范对应分析 (DCCA)排序方法 ,分析了不同群落类型中不同层次的物种数量结构的空间格局 ;定量分离了土壤、空间及其交互作用等因素对不同层次群落格局总体变异的影响。结果表明 :以水分为主导的多种环境因子耦合梯度决定着植物群落结构格局。环境因子对群落的影响程度在不同层次有差异 ,在灌木层中 ,单纯环境因子对植被格局的解释占 2 8.0 2 % ,环境 -空间耦合因子占 8.90 % ,空间因子独立占 10 .69% ,其他因子占 52 .3 9% ;而在草本层中 ,单纯环境因子对植被格局的解释占 2 0 .64% ,而环境 -空间耦合因子仅占 0 .83 % ,空间因子独立占 5.10 % ,其他因子占 73 .43 % ,草本的可解释性远远低于灌木。但无论是灌木层还是草本层 ,在诸多因子中 ,土壤水分始终在影响群落物种数量结构的空间格局分布中起着主导作用     

江苏盐城黑紫鸥（Larus saundersi）繁殖微生境的选择

1999～2001年春夏对江苏盐城国家级自然保护区黑嘴鸥的繁殖微生境进行了调查,黑嘴鸥的繁殖生境包括碱蓬群落（Suaeda glauca）、獐毛群落（Aeluropus littoralis）和大米草群落（Spartina anglica）,通过生境可获得性与可利用性分析,得知黑嘴鸥营巢对碱蓬生境具有正选择性,对獐毛和大米草生境具有负选择性。对繁殖微生境选择研究的结果表明,黑嘴鸥繁殖微生境具有以下特征：植被高度5～25cm,植被盖度20%～60%,底栖生物量大于300g/m^2,距水源距离500～1000m,距人类活动干扰距离大于500m,滩涂开发和人为活动是影响盐城地区黑嘴鸥繁殖微生境选择的重要因素。本文对黑嘴鸥繁殖栖息地的保护和管理提出了一些建议。     

高寒草甸植物群落多样性及土壤因子对坡向的响应

坡向是山地的重要地形因子之一,是导致植物群落物种多样性和结构特征产生差异的间接环境因子,它通过改变光照、温度、水分和土壤养分等生态因子而对生物多样性、植物生长发育、生产力以及生态系统功能等产生重要影响.本文研究了青藏高原高寒草甸不同坡向上的植物群落物种多样性变化特点及与环境因子的关系.结果表明:阳坡-阴坡生境梯度上,土壤含水量的变化趋势为阴坡＞半阴半阳坡＞阳坡,土壤温度和光照度的变化趋势为阳坡＞半阴半阳坡＞阴坡,土壤养分含量除了全氮和有机碳为阴坡＞阳坡＞半阴半阳坡外,其他养分总体呈现阴坡＞半阴半阳坡＞阳坡.阳坡-阴坡生境梯度上植物群落物种多样性的变化趋势为:阴坡＞半阴半阳坡＞阳坡,阳坡的主要功能群是禾草类,而阴坡则是杂草类.相关分析表明,在阴阳坡微生境梯度上,光、热、水、土均影响了物种多样性的变化,而其中土壤含水量是引起这种变化的主要因素.     

三峡水库消落带植被高程梯度分异及其对生境胁迫的响应

三峡水库蓄水运行形成的极端生境胁迫深刻改变了消落带植被结构和功能。在消落带横向断面高程梯度上,植被生境具有典型的空间异质性。选取三峡水库典型自然恢复消落带,通过野外调查和室内分析,揭示了消落带自然演替植被的群落构成、物种多样性和生物量随高程梯度的分异特征,系统分析了极端淹水、侵蚀-沉积、土壤环境等生境胁迫类型对消落带植被高程梯度分异的影响。结果表明：①研究消落带适生植被以草本为主,共有15科25种23属,其中禾本科种类较多,但单属单种、单优群落现象明显;一年生和多年生草本分别占52%和48%,且一年生草本多在消落带上部定居,多年生草本主要在消落带下部聚集。②物种多样性指数与高程呈正相关趋势,在145-150m范围内较低,在160-170m范围内较高。③植被生物量为199.68-1211.2g/m²,总体呈现随高程增加而显著增加的趋势;受多种生境因子的复合胁迫影响,生物量随高程存在局部波动。④水库水位变动形成淹水时长、出露时令、淹水强度等是影响消落带植被生物量高程梯度分异的主导因子;侵蚀/沉积过程改变土层厚度、根层土壤持水能力和肥力条件,对植被生长产生重要影响;土壤水分和氮是植被生长的限制性因子。因此,优势生境适宜性物种选育、土壤基质保育和植被格局功能优化是三峡水库消落带植被恢复和生态功能重建的重要任务。     

A Unique Protease Cleavage Site Predicted in the Spike Protein of the Novel Pneumonia Coronavirus (2019-nCoV) Potentially Related to Viral Transmissibility

正Dear Editor,In December 2019, a novel human coronavirus caused an epidemic of severe pneumonia(Coronavirus Disease 2019,COVID-19) in Wuhan, Hubei, China(Wu et al. 2020; Zhu et al. 2020). So far, this virus has spread to all areas of China and even to other countries. The epidemic has caused 67,102 confirmed infections with 1526 fatal cases     

Curcuminoids as inhibitors of thioredoxin reductase: A receptor based pharmacophore study with distance mapping of the active site

Curcumin is the yellow pigment of turmeric that interacts irreversibly forming an adduct with thioredoxin reductase (TrxR), an enzyme responsible for redox control of cell and defence against oxidative stress. Docking at both the active sites of TrxR was performed to compare the potency of three naturally occurring curcuminoids, namely curcumin, demethoxy curcumin and bis-demethoxy curcumin. Results show that active sites of TrxR occur at the junction of E and F chains. Volume and area of both cavities is predicted. It has been concluded by distance mapping of the most active conformations that Se atom of catalytic residue SeCYS498, is at a distance of 3.56 from C13 of demethoxy curcumin at the E chain active site, whereas C13 carbon atom forms adduct with Se atom of SeCys 498. We report that at least one methoxy group in curcuminoids is necessary for interation with catalytic residues of thioredoxin. Pharmacophore of both active sites of the TrxR receptor for curcumin and demethoxy curcumin molecules has been drawn and proposed for design and synthesis of most probable potent antiproliferative synthetic drugs.     

Comparative morphology of the carpel in the Liliaceae: Hewardieae, Petrosavieae, and Tricyrteae

The young pistils in the melanthioid tribes, Hewardieae, Petrosavieae and Tricyrteae, are uniformly tricarpellate and syncarpous. They lack raphide idioblasts. All are multiovulate, with bitegmic ovules. The Petrosavieae are marked by the presence of septal glands and incomplete syncarpy. Tepals and stamens adhere to the ovary in the Hewardieae and the Petrosavieae but not in the Tricyrteae. Two vascular bundles occur in the stamens of the Hewartlieae and Tricyrtis latifolia. Ventral bundles in the upper part of the ovary of the Hewardieae are continuous with compound septal bundles and placental bundles in the lower part. Putative ventral bundles occur in the alternate position in the Tricyrteae and putative placental bundles in the opposite. position in the Petrosavieae. The dichtomously branched stigma in each carpel of the Tricyrteae is supplied by a bifurcated dorsal bundle.     

Enterovirus 71 3C proteolytically processes the histone H3 N-terminal tail during infection

Highlights
1. The N-terminal tail of histone H3 is specifically cleaved during EV71 infection.
2. Viral protease 3C is identified as a protease responsible for proteolytically processing the N-terminal H3 tail.
3. Our finding reveals a new epigenetic regulatory mechanism for Enterovirus 71 in virus-host interactions.     

Detection of EBV and HHV6 in the Brain Tissue of Patients with Rasmussen’s Encephalitis

Rasmussen’s encephalitis (RE) is a rare pediatric neurological disorder, and the exact etiology is not clear. Viral infection may be involved in the pathogenesis of RE, but conflicting results have reported. In this study, we evaluated the expression of both Epstein-Barr virus (EBV) and human herpes virus (HHV) 6 antigens in brain sections from 30 patients with RE and 16 control individuals by immunohistochemistry. In the RE group, EBV and HHV6 antigens were detected in 56.7% (17/30) and 50% (15/30) of individuals, respectively. In contrast, no detectable EBV and HHV6 antigen expression was found in brain tissues of the control group. The co-expression of EBV and HHV6 was detected in 20.0% (6/30) of individuals. In particular, a 4-year-old boy had a typical clinical course, including a medical history of viral encephalitis, intractable epilepsy, and hemispheric atrophy. The co-expression of EBV and HHV6 was detected in neurons and astrocytes in the brain tissue, accompanied by a high frequency of CD8⁺ T cells. Our results suggest that EBV and HHV6 infection and the activation of CD8⁺ T cells are involved in the pathogenesis of RE.     

Perinatal Vertical Transmission of Chikungunya Virus in Ruili,a Town on the Border between China and Myanmar

正Dear Editor,Chikungunya virus (CHIKV), an arbovirus in the family of Togaviridae, genus Alphavirus, is transmitted by the A.aegyptii or A. albopictus mosquito, and causes disease in humans characterized by fever, rash, and arthralgia (Silva and Dermody 2017; Suhrbier 2019). It was first reported in 1953 in Tanzania, and caused only a few outbreaks and sporadic cases in Africa and Asia in last century. However, in the epidemic in 2004, CHIKV acquired mutations that conferred enhanced transmission by the A. albopictus mosquito(Schuffenecker et al. 2006). Since then, it has successively caused outbreaks in Africa, the Indian Ocean, South East Asia, the South America, and Europe (Zeller et al. 2016).     

Development of a Novel Reverse Transcription Loop-Mediated Isothermal Amplification Method for Rapid Detection of SARS-CoV-2

In conclusion, the novel visual RT-LAMP assay is a simple, rapid, and sensitive approach for detection of SARS-CoV-2, and it is ready for application in primary care and community hospitals or health care centers, and even patients' own houses in response to the current SARS-CoV-2 epidemic because the assay does not require sophisticated equipment and skilled personnel. Furthermore, it is also ready to be used in fields for screening samples from wild animals and environments to facilitate the identification of potential intermediate hosts that mediate the cross-species transmission of SARS-CoV-2 from bats to humans.