塔里木盆地晚泥盆世东河塘组河口湾相遗迹化石

河口湾具有特定的环境条件和沉积组成,其遗迹化石具有半咸水沉积的遗迹群落特征。描述和分析塔里木盆地塔中4井区上泥盆统东河塘组河口湾沉积中的遗迹化石和生物扰动构造后,发现3类遗迹组构,其中Ophiomorpha遗迹组构发育在纯净砂岩中,与河口湾潮汐砂坝有关;Skolithos遗迹组构发育在薄层砂岩中,与河口湾砂坪有关;Palaeophycus遗迹组构发育在泥岩中,与河口湾泥坪、砂泥坪有关。     

西藏南部堆纳地区上白垩统及下第三系遗迹化石及其环境意义

描述我国西藏南部堆纳地区宗山组下部及基堵拉组中的遗迹化石。宗山组中的遗迹化石组合可归属于Ｚｏｏｐｈｙｃｏｓ遗迹相,该遗迹相可进一步划分产于富氧条件下的Ｔｈａｌａｓｓｉｎｏｉｄｅｓ－Ｐｌａｎｏｌｉｔｅｓ遗迹及产于贫氧条件下Ｚｏｏｐｈｙｃｏｓ－Ｃｈｏｎｄｒｉｔｅｓ遗迹亚相。基堵拉组中的遗迹化石组可归属于在高能的潮下带的临滨和潮间带的前滨环境下产生的Ｓｋｏｌｉｔｈｏｓ遗迹相。     

川中-川南地区上三叠统滨浅湖沉积中的遗迹化石

川中-川南地区上三叠统滨浅湖沉积中产有丰富的动物遗迹化石,识别为3大类6属8种,包括Sko-lithos linearis,S.verticalis,Ophiomorpha nodosa,Planolites beverleyensis,P.montanus,Palaeophycus tubularis,Taenidiumsatanassi和Cochlichnus anguineus,另外,逃逸构造也很发育。这些遗迹化石主要是无脊椎动物的居住迹、进食迹和觅食迹,大多为全浮痕和上浮痕保存。根据遗迹化石的组合特征及其沉积环境,可识别出3个遗迹组合:1)Skolithos linearis遗迹组合,主要由长的垂直或高角度倾斜的悬食居住潜穴构成,反映高能的砂质滨湖环境;2)Cochlichnus-Planolites遗迹组合,主要由进食迹和牧食迹组成,形成于低能的滨湖沼泽环境;3)Skolithos-Planol-ites遗迹组合,以居住潜穴和进食潜穴为主,遗迹化石的丰度较高,代表潮湿气候条件下的浅湖环境。根据生物扰动的分布及扰动强度,浅湖中可识别出两类扰动类型,即1)砂泥边界扰动,扰动主要发育于砂泥交界处,代表了浅湖下部环境;2)薄砂层扰动,扰动主要发育于薄砂层中,主要出现于浅湖中下部沉积中。     

重庆万州下侏罗统自流井组湖相遗迹化石新类型及其古环境意义*

描述在重庆万州区铁峰山下侏罗统自流井组大安寨段首次发现的遗迹化石,鉴定为新种Palaeophycus tiefengshanensis。该种以潜穴表面瘤状凸起特征与较大的潜穴尺寸区别于古藻迹其他遗迹种。遗迹组构分析表明该遗迹化石产出层位的层面生物扰动指数为最高级5,说明原始沉积环境的食物供给充足,氧含量高,造迹生物大量繁盛并活动频繁。根据沉积相变化特征,四川盆地东部地区自流井组沉积期经历了与四川盆地北部地区类似的古环境变迁即湖退过程。两者区别在于四川盆地东部自流井组局部层段可能更适宜底栖动物生存。     

川西南峨眉山地区上白垩统夹关组遗迹组构特征及其环境意义

川西南峨眉山地区上白垩统夹关组由一套厚层到块状中、细砂岩组成,夹有少量粉砂岩和泥岩,底部有砾岩。本组地层中发育有丰富的遗迹化石,共识别出9属11种。根据遗迹化石的分布情况,划分出了5种遗迹组构,即:Palaeophycus遗迹组构、Arenicolites遗迹组构、Skolithos遗迹组构、Planolites遗迹组构和Scoyenia遗迹组构;结合它们所分布岩层的沉积特征,认为前三者分别分布于河流环境中水动力强的边滩下部、水动力中等到较强的边滩中上部和边滩向堤岸过渡的环境,后两者分布于水动力较弱的天然堤环境。     

四川龙门山地区下泥盆统平驿铺组的遗迹化石

四川龙门山甘溪剖面下泥盆统平驿铺组的滨浅海相地层中赋存无脊椎动物遗迹化石,可识别出居住迹、停息迹、觅食迹3大类,鉴定为11属,包括Arenicolites,Chondrites,Cylindrichnus,Diplocraterion,Palaeophycus,Planolites,Phycodes,Rhizocorallium,Rusophycus,Skolithos和Thalassinoides。根据遗迹化石特征及其沉积环境,可识别出5个遗迹组合:1)Planolites-Palaeophycus遗迹组合,主要由觅食迹组成,指示低能的砂质近滨环境;2)Rusophycus-Phycodes遗迹组合,主要是觅食迹和停息迹,形成于低能的近滨环境;3)Chondrites-Palaeophycus遗迹组合,主要是居住迹和觅食迹,反映了贫氧低能的近滨下部环境;4)Skolithos-Cylindrichnus遗迹组合,主要由居住迹组成,形成于高能的前滨环境;5)Skolithos-Diplocraterion遗迹组合,主要为居住迹和觅食迹组合,反映了低能、食物丰富的近滨上部环境。     

河南泌阳凹陷古近纪核桃园组遗迹化石组合及其环境意义——兼论深水湖泊遗迹相特征

南襄盆地泌阳凹陷古近纪核桃园组湖泊沉积中发育大量遗迹化石,含5个遗迹组合,形成于从滨湖到深湖的不同沉积环境中。Taenidiumserpentinum遗迹组合反映稍有覆水并周期性暴露的低能滨湖环境;Skolithos linearis遗迹组合代表湖泊中上临滨环境;Planolites montanus遗迹组合与低能浅湖环境有关;Skolithos verticalis遗迹组合形成于浅湖的远源风暴沉积中;Semirotundichnus dongyingensis遗迹组合发育在贫氧的半深湖-深湖沉积环境中。     

遗迹化石Chondrites的指相意义和阶层分布

介绍和评述Chondrites的基本特征和流行的成因解释 ,记述最近发现于美国犹他州中西部北美下 中奥陶统之交层型剖面上的Chondrites遗迹组构的不寻常特征和属性 :细小的Chondrites被所有与之共生的遗迹化石交切 ,形成于水与沉积物界面附近缺氧的早期软底质中 ,Chondrites是形成最早和最浅的遗迹阶层。流行的遗迹相和遗迹阶层模式的不足是 :前者在操作上 ,简单地将遗迹化石及其组合处理为同沉积或准同沉积的物理沉积构造 ,忽略了造迹活动的多阶段和多阶层的特点 ;后者的资料基础仅依据中生代以来的地层记录 ,对重大生物 环境事件和造迹生物生态习性演化对遗迹阶层形成和分布的影响注重不够。指出Chondrites的阶层分布和对古氧相的示踪在古生代与中生代有重要差别     

遗迹化石:探索生物与环境相互作用的重要信息载体*

遗迹化石是地质历史时期生物在沉积物表面和内部所留下的生命活动记录.遗迹化石不仅与生物种类和生活习性密切相关,还受到环境因子和沉积介质的影响和控制.地质地史时期的软躯体生物很难保存为化石,而它们生命活动的行为习性都烙印在了遗迹化石里.因此,遗迹化石成为探索生物与环境相互作用的重要信息载体,在重建古环境和古生态、探索早期生命演化和理解重大地质转折期底栖生态系对极端环境事件的响应上具有重要意义.本文聚焦于近年来这三大方向遗迹学方面的研究进展,并对将来遗迹学的发展方向进行了展望.     

湘西北地区志留,泥盆系遗迹化石再研究

记述了湘西北地区志留、泥盆系的遗迹化石１４属,２８种、亚种（包括１５新种,２新亚种）。这些遗迹化石主要集中于Ｔｒａｕｅｕｍｉｃｈｉｓ－Ａｒｔｈｒｏｐｈｙｃｕｓ群落（代表前滨下部或近滨上部）,Ｔｈａｌａｓｓｉｎｏｉｄｅｓ－Ｌｏｃｋｅｉａ群落（代表近滨上部或前滨下部环境）和Ｃｒｕｚｉａｎａ－Ｄｉｍｏｒｐｈｉｃｈｎｕｓ群落（代表近滨环境）,并对上述３个遗迹群落的古生态作了分析。     

A Unique Protease Cleavage Site Predicted in the Spike Protein of the Novel Pneumonia Coronavirus (2019-nCoV) Potentially Related to Viral Transmissibility

正Dear Editor,In December 2019, a novel human coronavirus caused an epidemic of severe pneumonia(Coronavirus Disease 2019,COVID-19) in Wuhan, Hubei, China(Wu et al. 2020; Zhu et al. 2020). So far, this virus has spread to all areas of China and even to other countries. The epidemic has caused 67,102 confirmed infections with 1526 fatal cases     

Curcuminoids as inhibitors of thioredoxin reductase: A receptor based pharmacophore study with distance mapping of the active site

Curcumin is the yellow pigment of turmeric that interacts irreversibly forming an adduct with thioredoxin reductase (TrxR), an enzyme responsible for redox control of cell and defence against oxidative stress. Docking at both the active sites of TrxR was performed to compare the potency of three naturally occurring curcuminoids, namely curcumin, demethoxy curcumin and bis-demethoxy curcumin. Results show that active sites of TrxR occur at the junction of E and F chains. Volume and area of both cavities is predicted. It has been concluded by distance mapping of the most active conformations that Se atom of catalytic residue SeCYS498, is at a distance of 3.56 from C13 of demethoxy curcumin at the E chain active site, whereas C13 carbon atom forms adduct with Se atom of SeCys 498. We report that at least one methoxy group in curcuminoids is necessary for interation with catalytic residues of thioredoxin. Pharmacophore of both active sites of the TrxR receptor for curcumin and demethoxy curcumin molecules has been drawn and proposed for design and synthesis of most probable potent antiproliferative synthetic drugs.     

Comparative morphology of the carpel in the Liliaceae: Hewardieae, Petrosavieae, and Tricyrteae

The young pistils in the melanthioid tribes, Hewardieae, Petrosavieae and Tricyrteae, are uniformly tricarpellate and syncarpous. They lack raphide idioblasts. All are multiovulate, with bitegmic ovules. The Petrosavieae are marked by the presence of septal glands and incomplete syncarpy. Tepals and stamens adhere to the ovary in the Hewardieae and the Petrosavieae but not in the Tricyrteae. Two vascular bundles occur in the stamens of the Hewartlieae and Tricyrtis latifolia. Ventral bundles in the upper part of the ovary of the Hewardieae are continuous with compound septal bundles and placental bundles in the lower part. Putative ventral bundles occur in the alternate position in the Tricyrteae and putative placental bundles in the opposite. position in the Petrosavieae. The dichtomously branched stigma in each carpel of the Tricyrteae is supplied by a bifurcated dorsal bundle.     

Enterovirus 71 3C proteolytically processes the histone H3 N-terminal tail during infection

Highlights
1. The N-terminal tail of histone H3 is specifically cleaved during EV71 infection.
2. Viral protease 3C is identified as a protease responsible for proteolytically processing the N-terminal H3 tail.
3. Our finding reveals a new epigenetic regulatory mechanism for Enterovirus 71 in virus-host interactions.     

Detection of EBV and HHV6 in the Brain Tissue of Patients with Rasmussen’s Encephalitis

Rasmussen’s encephalitis (RE) is a rare pediatric neurological disorder, and the exact etiology is not clear. Viral infection may be involved in the pathogenesis of RE, but conflicting results have reported. In this study, we evaluated the expression of both Epstein-Barr virus (EBV) and human herpes virus (HHV) 6 antigens in brain sections from 30 patients with RE and 16 control individuals by immunohistochemistry. In the RE group, EBV and HHV6 antigens were detected in 56.7% (17/30) and 50% (15/30) of individuals, respectively. In contrast, no detectable EBV and HHV6 antigen expression was found in brain tissues of the control group. The co-expression of EBV and HHV6 was detected in 20.0% (6/30) of individuals. In particular, a 4-year-old boy had a typical clinical course, including a medical history of viral encephalitis, intractable epilepsy, and hemispheric atrophy. The co-expression of EBV and HHV6 was detected in neurons and astrocytes in the brain tissue, accompanied by a high frequency of CD8⁺ T cells. Our results suggest that EBV and HHV6 infection and the activation of CD8⁺ T cells are involved in the pathogenesis of RE.     

Perinatal Vertical Transmission of Chikungunya Virus in Ruili,a Town on the Border between China and Myanmar

正Dear Editor,Chikungunya virus (CHIKV), an arbovirus in the family of Togaviridae, genus Alphavirus, is transmitted by the A.aegyptii or A. albopictus mosquito, and causes disease in humans characterized by fever, rash, and arthralgia (Silva and Dermody 2017; Suhrbier 2019). It was first reported in 1953 in Tanzania, and caused only a few outbreaks and sporadic cases in Africa and Asia in last century. However, in the epidemic in 2004, CHIKV acquired mutations that conferred enhanced transmission by the A. albopictus mosquito(Schuffenecker et al. 2006). Since then, it has successively caused outbreaks in Africa, the Indian Ocean, South East Asia, the South America, and Europe (Zeller et al. 2016).     

Development of a Novel Reverse Transcription Loop-Mediated Isothermal Amplification Method for Rapid Detection of SARS-CoV-2

In conclusion, the novel visual RT-LAMP assay is a simple, rapid, and sensitive approach for detection of SARS-CoV-2, and it is ready for application in primary care and community hospitals or health care centers, and even patients' own houses in response to the current SARS-CoV-2 epidemic because the assay does not require sophisticated equipment and skilled personnel. Furthermore, it is also ready to be used in fields for screening samples from wild animals and environments to facilitate the identification of potential intermediate hosts that mediate the cross-species transmission of SARS-CoV-2 from bats to humans.