苏云金杆菌4.0718菌株杀虫晶体65kD原毒素的质谱分析

以苏云金杆菌4.0718菌株杀虫晶体65kD原毒素为材料,探索了从SDS－PAGE胶上回收蛋白质进行质谱分析的方法。蛋白纯化的步骤包括SDS－PAGE、电洗脱、脱盐、除SDS。电洗脱采用半透膜法,用超滤法脱盐,冷丙酮沉淀法除去SDS。结果表明,纯化的65kD原毒素经ESI－MS检测,分子量约64500Da。经MALDI－MS检测,未能有明显蛋白峰出现,这可能是该蛋白由于较强的疏水作用,溶解性差,在与基质混合时处于聚和悬浮态所致。     

一种SDS-PAGE与MALDI-TOF质谱联用的方法

以尿激酶的为材料,探索一种从ＳＤＳ－ＰＡＧＥ胶上回收蛋白 做ＭＡＬＤＩ－ＴＯＦ质谱的方法,所用的回收方法包括电洗脱、脱盐、除ＳＤＳ等过程,电洗脱用的是高盐阻断法,脱盐用的超滤技术,去除ＳＤＳ用的是冷丙沉淀法,结果证明,此方法至少对一些蛋白质是可行的。     

一种利用普通垂直电泳槽回收PAGE胶蛋白条带的简便方法

植物总蛋白样品经聚丙烯酰胺凝胶电泳分离之后,直接用考马斯亮蓝染色、切胶回收目的条带,再用聚丙烯酰胺凝胶电泳槽电洗脱纯化得到单一条带的目的蛋白.此法可得到有活性的黄瓜衰老叶片中被特异激活的DNA酶,对样品中含量少,特别是与其他分子量相近的蛋白质十分有效.     

重组人尿激酶原纯化中浓缩方法的比较

对尿激酶原纯化中的浓缩方法进行了探索,先后采用了3种不同的方法,即超滤、CM-阳离子柱、疏水色谱柱浓缩。结果表明,超滤只适合于大量样品的浓缩,样品量较小时损失较大,而且机械作用较强会使部分产品分解;CM-阳离子枉浓缩回收率较高,但得到的产品盐浓度高,还需要经过脱盐处理,增加了操作步骤,而疏水柱浓缩方法较为理想,经它浓缩后的产品用SDS-PAGE分析,非还原条件下,纯度在98％以上,还原条件下单链占90％以上,浓缩16倍,尿激酶原浓度达到3mg/ml以上。     

蛋白质的肽质谱指纹图分析方法的优化

肽质谱指纹图分析是一种常用的蛋白质的鉴定方法.为了提高这种方法鉴定蛋白质时序列覆盖率和准确度,以6个标准蛋白质为分析样品,对几种不同的酶解肽段的浓缩、脱盐和点样方法进行了检验和优化.结果发现,将酶解肽段的浓缩体积控制在5μl以下和采用10mmolL柠檬酸铵缓冲液板上脱盐能提高蛋白质鉴定的准确度;在点样的时候,采用先点样品再点基质的方法能明显提高匹配肽段的个数和信噪比.这些优化的样品制备方法明显地提高了MALDITOF质谱肽质谱指纹图分析方法鉴定蛋白质的可靠性.     

多维色谱-串联质谱联用技术分离和鉴定小鼠肝脏质膜蛋白质

采用自动在线纳流多维液相色谱 串联质谱联用的方法分离和鉴定蔗糖密度梯度离心法分离和富集的小鼠肝脏质膜蛋白质 .以强阳离子交换柱为第一相 ,反相柱为第二相 ,在两相之间连接一预柱脱盐和浓缩肽段 .用含去污剂的溶剂提取细胞质膜中的蛋白质 ,获得的质膜蛋白质经酶解和适当的酸化后通过离子交换柱吸附 ,分别用 10个不同浓度的乙酸铵盐溶液进行分段洗脱 .洗脱物经预柱脱盐和浓缩后进入毛细管反相柱进行反相分离 ,分离后的肽段直接进入质谱仪离子源进行一级和二级质谱分析 .质谱仪采得的数据经计算机处理后用Mascot软件进行蛋白质数据库搜寻 ,共鉴定出 12 6种蛋白质 ,其中 4 1种为膜蛋白 ,包括与膜相关的蛋白质和具有多个跨膜区的整合膜蛋白 ,为建立质膜蛋白质组学研究的适宜方法和质膜蛋白质数据库提供了有价值的基础性研究资料 .     

团头鲂卵壳蛋白的分离与纯化

报道了一种从团头鲂卵壳中提取卵壳蛋白的有效方法。该提取淮经SDS－PAGE电泳鉴定后,证明有三条主要的蛋白带,其分子量分别为64KDa,56KDa和52KDa,借助于制备型SDS－PAGE电泳和电洗脱分离纯化技术,获得了三种高纯度的印壳蛋白。     

用国产微孔玻璃珠初步纯化重组人尿激酶原

用国产微孔玻璃珠从CD-1工程细胞株培养上清中纯化尿激酶原,探索了微孔玻璃珠结合尿激酶原的条件和洗脱方法,比较了硫酸铵线性梯度洗脱或25％乙二醇脱尿激酶原活性蛋白的结果,最后确定洗脱条件为0.25mol/L Tris、1～2mol/L(NH_4)_2SO_4、pH9.3。经此一步纯化,尿激酶原比活性达到15329IU/mg,回收率为78％,还原条件下SDS-PAGE分析分子量为52×10~3的单链尿激酶原占74％。     

尿激酶原-RGDS双功能分子——构建、表达及性质研究

利用定点突变及DNA重组技术 ,构建了在尿激酶原K区C 端的β 发夹区插入了精氨酸 甘氨酸 天冬氨酸 丝氨酸 (RGDS)片段的尿激酶原嵌合体基因 ,并利用昆虫杆状病毒表达系统通过感染Sf9细胞对嵌合体尿激酶原进行了高效表达 .用尿激酶原单抗亲和柱纯化表达产物 ,获得初步纯化的嵌合体蛋白 .对嵌合体蛋白进行血小板膜结合实验表明 ,此嵌合体具有依赖于钙离子的结合活化血小板膜的活性 .用生色底物Chromozym U测定嵌合体的酰胺解活性 ,结果显示 ,纤溶酶激活后的嵌合体比活为 62 0 0 0IU/mg,与文献报道的纤溶酶激活的尿激酶原比活 65 3 5 5IU/mg相近 .纤溶酶激活后的嵌合体激活纤溶酶原的反应符合米氏方程 ,其Km 值为 0 .97μmol/L ,与天然尿激酶的Km 值 1.64μmol/L相近 .嵌合体还显示了较强的体外抑制血小板聚集活性 .这些结果表明 ,此尿激酶原 RGDS嵌合体有可能成为一种新的双功能溶栓药物 .     

玉米细胞质HSC70的分离纯化及其抗体的制备

依据某些热激蛋白对ATP具有高度亲和性的特性,介绍了用ATP-琼脂糖亲和柱结合电洗脱分离纯化玉米幼苗细胞质HSC70及制备兔抗HSC70多抗的方法.先采用ATP-琼脂糖亲和柱初步分离几种能与ATP结合的热激蛋白,后用SDS-PAGE,切下分子量为70 kD的电泳谱带,电洗脱后用以免疫新西兰兔,以ELISA法和Western blot检测抗体效价和特异性.     

Efficacy and compatibility with mass spectrometry of methods for elution of proteins from sodium dodecyl sulfate-polyacrylamide gels and polyvinyldifluoride membranes

The resolving power of sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) combined with isoelectric focusing in two-dimensional gel electrophoresis has made it one of the most important techniques for resolving complex mixtures, and it is of great importance for proteome mapping projects. As a result of this, methods for postelectrophoretic protein characterization are of great interest as exemplified by in situ protease digestion combined with mass spectrometry (MS), which is the method of choice for identification of proteins. In this study we have developed and compared methods for recovering intact proteins from polyacrylamide gels and electroblotting membranes to define efficient methods compatible with MS. These methods complement in situ digestion protocols and allow determination of the molecular mass of whole proteins separated by SDS-PAGE. Passive elution of proteins from SDS-PAGE gels was efficient only in the presence of SDS, whereas electroelution was achieved using buffers without SDS. Surface-enhanced laser desorption/ionization MS (SELDI-MS) analysis of proteins eluted in the presence of SDS was possible using ion exchange ProteinChip arrays for concentration of sample and removal of SDS. Comparison of different electroblotting methods verified that the different membranes and buffers were equally efficient for transfer of proteins in the range 20-100 kDa. Elution from polyvinyldifluoride membranes was most efficient using either concentrated solutions of trifluoroacetic acid (TFA) or combinations of 8M urea and 1% Triton X-100, 1% Tween 20, or 40% isopropanol. The same result was obtained using nitrocellulose membranes, except that these were incompatible with organic solvent and TFA. Elution by TFA was compatible with matrix-assisted laser desorption/ionization MS (MALDI-MS) but was complicated by a high degree of trifluoroacetylation of the proteins. Alternatively, elution by 8M urea+1% Triton X-100, 1% Tween 20, or 40% isopropanol was compatible with both SELDI-MS and MALDI-MS. Eluted proteins were identified in MS experiments by intact mass determination, by peptide mapping, and by MS/MS analysis.     

从琼脂糖电泳凝胶中回收DNA的几种简便方法

介绍两类从普通琼脂糖电泳凝胶中回收ＤＮＡ的简便、快捷、高效且廉价的方法．第一类为电泳洗脱法．方法ａ：利用１．５ｍＬ微量离心管、ｌｍＬ吸头、尼龙网膜和透析膜做成的一个小装置,快速有效回ＤＮＡ,最终回收率为７０％左右．方法ｂ：不用ＤＥＡＥ－纤维素膜,而用透析膜在凝胶中作出横隔挡在ＤＮＡ条带前,最终回收率为５０％左右;第二类为冰冻融解法,最终回收率也在５０％左右．如果联合使用冰冻融解法和电泳洗脱法,回收率可进一步提高至９０％．     

Electroelution of fixed and stained membrane proteins from preparative sodium dodecyl sulfate-polyacrylamide gels into a membrane trap

The membrane trap is a new device for the electroelution of all kinds of charged macromolecules from gels. Instead of dialysis membranes, the membrane trap uses a new membrane. Retention of macromolecules in an electric field by dialysis membranes depends on the presence of sodium dodecyl sulfate (SDS) in the buffer. The new membrane retains all charged macromolecules larger than approximately 5000 Da without adsorbing them, independent of the use of SDS. Here we report the electroelution of five different lipophilic membrane proteins (33 to 193 kDa) of Mycoplasma pneumoniae from preparative SDS-polyacrylamide gels into a 300-microliter recovery volume. After an 8-h elution period, recovery ranged from 80 (193 kDa) to 97% (33 kDa). The "losses" were generally due to proteins still remaining in the gel slice. All of the eluted proteins tested in a dot-blot assay proved to be antigenically active. The advantages of the device described here are easy handling (insertion of membranes, open system), quantitative recovery, and high reproducibility of the elution results.     

蜘蛛HMW-gDNA的电洗脱纯化提取

该文研究了蜘蛛大分子量基因组DNA（HMW-gDNA）的提取以及一种高效电洗脱纯化装置的构建。以蜘蛛胸部肌肉组织为原料,通过自改良CTAB法提取蜘蛛HMW-gDNA,利用透析膜和2 mL离心管构建一种新的HMW-gDNA快速凝胶回收装置,并对蜘蛛HMW-gDNA进行电洗脱分离回收。结果显示,改良CTAB法可高效提取蜘蛛HMW-gDNA（>48.5 kb）,且通过透析膜的截留作用,对普通琼脂糖凝胶中目的HMW-gDNA进行快速电洗脱分离,其回收率超过75%,OD₂₆₀/OD₂₈₀处于1.8～2.0之间,对HMW-gDNA完整性无影响。综合结果表明, 改良CTAB法可用于蜘蛛HMW-gDNA的提取,此电洗脱纯化装置可从普通琼脂糖中高效回收HMW-gDNA,是一种低成本、简捷、高效且实用性强的凝胶回收方法。     

Affinity chromatographic procedure for the quantitative recovery of DNA fragments from agarose gels

A simple and reliable method for the recovery of specific fragments of DNA from agarose gels is presented. The electroelution of the DNA onto the NENSORB cartridge matrix with the subsequent elution of the bound DNA by a methanol (50% v/v) wash has been shown to result in the quantitative recovery of the restriction fragment. Of importance is the fact that the DNA purified by this procedure is a viable substrate for further digestion by a second restriction endonuclease. The method does not require either phenol extraction or extensive desalting of the sample.     

Single-step electroelution of proteins from SDS-polyacrylamide gels and immobilization on diisothiocyanate-glass beads in prepacked capillary columns for solid-phase microsequencing

A new method for immobilization of proteins purified by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) prior to sequencing is described. It utilizes a simple apparatus that permits the simultaneous electroelution of proteins from gel slices and attachment to diisothiocyanate-activated glass beads prepacked in capillary tubes [S-P. Liang and R. A. Laursen, Anal. Biochem. 188, 366-373 (1990)]. Transfer/attachment yields of greater than 80% within 90 min were observed for several 125I-labeled proteins with a range of molecular weights using 0.2 M sodium phosphate (pH 8.9) buffer containing 0.1% SDS. The method has the advantage of high capacity, relative simplicity, and insensitivity to the presence of SDS and Coomassie blue stain. The highest transfer yields were obtained when proteins were run on gels which had been aged for at least 12 h. For 100- to 1000-pmol samples, the sequenceable amount of protein, including transfer, was generally 30-60%, with an average repetitive yield of 95%. Factors which influence sample recovery and sequencing yield are discussed.     

Removal of sodium dodecyl sulfate from proteins.

A convenient and relatively simple electrodialysis method for the removal of sodium dodecyl sulfate (SDS) from proteins is described. Six samples can be processed simultaneously. The kinetics of removal of SDS from proteins by equilibrium dialysis and electrodialysis have been studied.     

A simple infrared spectroscopic method for the measurement of expired 13CO2.

A simple method for determination of proteins, initially solubilized in Tris buffer containing sodium dodecyl sulfate (SDS), mercaptoethanol, and sucrose, is described. This method is based on protein and Coomassie brilliant blue G-250 binding but it involves the removal of excess SDS by precipitation with 100 mm potassium phosphate buffer, pH 7.4 to 7.5, prior to protein determination. It has been established that the precipitation of excess SDS does not lead to the removal of the solubilized proteins. Therefore the method is applicable to both water-soluble and water-insoluble protein samples.