云南松（Pinus yunnanensis）林外生菌根真菌的时空分布

2000年至2005年,调查了滇中及其附近云南松林下外生菌根真菌的生态分布,共采集、鉴定标本834号,计有27科39属211种（含变种、变型）。结果表明,红菇属（Russula）、牛肝菌属（Boletus）、乳菇属（Lactarius）、乳牛肝菌属（Suillus）、口蘑属（Tricholoma）、鸡油菌属（Cantharellus）和革菌属（Thelephora）等为云南松林下的主要外生菌根菌类群。它们的发生与分布受到气候（如：气温和降水）、植被（如：林龄、林地郁闭度和草本植被）、地形特征（如：海拔、坡向和坡度）、土壤条件（如：pH值、地表腐殖质和枯枝落叶层等）和人为干扰（比如：商业化采集、林木采伐、火烧和地表物清理）诸多因素的影响。总结为如下：(1）5a的调查结果显示,云南松外生菌根菌的分布表现出季节性变化的规律;其中以每年1、2、3月份的物种多样性为最低,雨季期间急剧增加,至中夏和秋末达到顶峰,种类最为繁多。(2）在海拔1500～2100 m,云南松外生菌根菌种类随着海拔的升高而逐渐增加,至顶峰后,又呈缓慢下降趋势。海拔因素不但对其物种多样性,而且对于类群的组成也具有重要的影响。特定的类群往往发生在特定海拔范围。(3）随着云南松林龄的增加,外生菌根菌呈现由少至多的演替过程。外生菌根菌多样性随云南松林生长而逐渐增加的演替方式,可能与宿主光合作用产物、根部分泌物和土壤条件的逐渐变化有关。(4）人类干扰是云南松外生菌根菌物种多样性和类群组成的主要负影响因子。大规模的商业化采集可破坏或枯竭地下菌丝体,打破各物种之间的竞争平衡,减少孢子释放影响资源再生能力,进而直接影响到子实体的产生。外生菌根菌物种多样性的减少趋势会随林木砍伐和火烧强度的增加而加剧。地表枯枝落叶层与杂草密度也会影响子实体的产生,其中枯枝落叶层的厚度与云南松外生菌根菌子实体的发生呈负相关性,而被紫茎泽兰覆盖的云南松林地内也很少会发现相应的子实体。     

黄山地区松树林外生菌根菌资源及生态分布

1998～2003年,对黄山地区松树林下外生菌根菌资源及生态分布进行了调查,鉴定出外生菌根菌43种,隶属于10科17属.其中马尾松林下有43种、黄山松林下有12种.马尾松幼林下的外生菌根菌种类单一,彩色豆马勃、硬皮马勃类为优势菌种;马尾松成熟林下外生菌根菌种类丰富,其优势种类为红菇科、鹅膏菌科、牛肝菌科和鸡油菌科的一些种类.并分析了树种植被对外生菌根菌分布的影响,菌根真菌的分布与温度、湿度及土壤条件的关系.     

呼伦贝尔沙地樟子松外生菌根真菌多样性

沙地樟子松是我国北方重要的防风固沙造林树种,也是一种典型的外生菌根依赖型树种。为揭示呼伦贝尔沙地樟子松外生菌根真菌多样性,以中龄、近熟、成熟3个龄组沙地樟子松人工林和沙地樟子松天然林为研究对象,采用野外调查和分子生物学相结合的研究方法,鉴定分析沙地樟子松外生菌根真菌种群特征。研究结果表明：（1）呼伦贝尔沙地樟子松外生菌根真菌共有10个OTU属于子囊菌,48个OTU属于担子菌,隶属于21科25属。（2）天然林优势菌为糙缘腺革菌属Amphinema、丝膜菌属Cortinarius和乳牛肝菌属Suillus,人工林优势菌为乳牛肝菌属,其余菌种相对丰度随着林龄变化波动较大。（3）天然林与人工林外生菌根真菌种群Shannon、Simpson和Pielou指数存在显著差异（P<0.05）,人工林间alpha多样性指数差异不显著（P>0.05）。（4）呼伦贝尔沙地樟子松天然林和人工林外生菌根真菌种群组成存在较大差异,其中近熟林的外生菌根真菌群落组成与天然林的最为接近。     

昆明树木园枯枝落叶层无脊椎动物群落多样性

为了解昆明树木园枯枝落叶层无脊椎动物群落结构及特征,于2010年5月-2011年9对昆明树木园中香樟(Cinnamomum camphora)、圆柏(Sabina chinensis)、玉兰(Magnolia denudata)、云南松(Pinus yunnanensis)、红枫(Acer palmatum cv.Atropuceum)共5个树种的枯枝落叶层无脊椎动物进行采样调查.共采获无脊椎动物25237头,隶属于2门5纲18目15科,其中蜱螨目和弹尾目为优势类群;缨翅目、伪蝎目、半翅目和革翅目为常见类群.采用Shannon多样性指数、Pielou均匀度指数和Simpson优势度指数来衡量5个树种的枯枝落叶层无脊椎动物多样性,结果表明:5个树种的枯枝落叶层中无脊椎动物群落物种组成相似,群落中时空异质性较低;5个树种的枯枝落叶层中共采集菌食性蓟马375头,隶属l科、3属、4种,其中,奇管蓟马属(Allothrips)为云南新纪录属,同时也是昆明树木园菌食性蓟马群落中的绝对优势类群.     

内蒙古地区白桦外生菌根形态类型及分子鉴定

以内蒙古不同地区白桦外生菌根为材料,采用形态解剖学方法和分子生物学手段对与白桦共生的外生菌根真菌多样性进行全面的调查,并经对所测序列与GenBank和Database比对。结果显示:在内蒙古地区与白桦共生的外生菌根真菌共13种,其中担子菌7种,子囊菌4种,分别来自于丝膜菌属、丝盖伞属、蜡壳耳属、毛革菌属、滑菇属和空团菌属、块菌属、地怀菌属。其中,菌根类型T₈和T₁₁未能提出其总DNA,根据其外生菌根形态类型并参照Agerer体视显微镜菌根图谱和Haug菌根图谱进行比较,分类鉴定为荷顿氏疣柄牛肝菌和白桦外生菌根真菌一种。结果表明,内蒙古地区白桦外生菌根真菌多样性相对较高,且与利用地上子实体鉴定的外生菌根真菌种类有一定的区别。     

辽东栎幼苗的外生菌根合成

 在温室花盆中播种辽东栎（Quercus liaotungensis）种子获得辽东栎幼苗,并对幼苗接种外生菌根真菌进行菌根合成试验。所用的外生菌根真菌有：铆钉菇（Gomphidius viscidus）、臭红菇（Russula foetens）、厚环乳牛肝菌（Suillus grevillei）、褐环乳牛肝菌（S. luteus）、彩色豆马勃（Pisolithus tinctorius）、美味牛肝菌（Boletus edulis）、赭丝膜菌（Cortinarius russus）、土生空团菌（Cenococ     

印度块菌-云南松菌根际土壤细菌的种群组成和群落结构

以印度块菌-云南松菌根际土壤细菌为研究对象,研究其种群组成和结构特征。(1)稀释平板法分离得到印度块菌-云南松菌根际土壤细菌的纯培养菌株,对菌株的16S rRNA序列测序分析,对测序的菌株数量和得到的OTUs数量绘制物种累积曲线,当物种累积曲线趋于平缓时,对OTUs进行系统发育分析,揭示可培养细菌的种群组成和结构特征。(2)对印度块菌-云南松菌根际土壤细菌16S rRNA基因的V3—V4区进行高通量测序,分析全部细菌类群的种群组成和结构特征。(1)分离得到菌根际可培养细菌793株,分属于3个属的61个OTUs,其中假单胞菌属(Pseudomonas)序列占总序列的86%,不动杆菌属(Acinetobacter)序列占总序列的9.8%,链霉菌属(Streptomyces)序列占总序列的6.5%。假单胞菌是印度块菌-云南松菌根际土壤可培养细菌的绝对优势类群。(2)高通量测序得到菌根际细菌序列8937条,分属于20个门、198属、2073个OTUs。隶属于变形菌门(Proteobacteria)、放线菌门(Actinobacteria)和酸杆菌门(Acidobacteria)的OTUs占总OTUs的65.9%,变形菌门、放线菌门和酸杆菌门细菌是印度块菌-云南松菌根际土壤细菌的优势细菌。隶属于黄杆菌属(Flavobacterium)、根瘤菌属(Rhizobium)和假黄色单胞菌属(Pseudoxanthomona)的OTUs占总OTUs的33%,黄杆菌属、根瘤菌属和假黄色单胞菌属细菌是印度块菌-云南松菌根际土壤细菌的优势属。印度块菌-云南松菌根际土壤可培养细菌多样性较低,假单胞菌属细菌占据绝对优势地位。印度块菌-云南松菌根际土壤细菌类群具有较高的多样性,物种种类丰富,优势菌群集中。     

东北红松纯林菌根外生菌根真菌群落与环境因子的相关性

外生菌根是木本植物根系与真菌形成的共生结构,外生菌根真菌在红松等外生菌根树种的定植与森林生态系统的保持方面起到至关重要的作用。明确菌根系统内外生菌根真菌群落组成是揭示菌根共生机制的前提条件。本研究利用Illumina Hiseq测序平台对生长季内红松纯林内根围土壤及菌根样品ITS2区进行高通量测序,分析其外生菌根真菌群落结构随季节的变化规律,同时通过统计学的方法分析了红松根系微生态中外生菌根真菌群落结构组成变化与其他生物因素、非生物因素的相关性。结果如下：（1）从6月份到10月份,5个月的菌根样品测序共得到741个真菌OTUs,利用FUNGuild数据库分析,其中85个OTUs归类为外生菌根真菌,优势属（相对丰度>5）为蜡壳菌属Sebacina、乳牛肝菌属Suillus、Meliniomyces、红菇属Russula、棉革菌属Tomentella、须腹菌属Rhizopogon和缘腺革菌属Amphinema。6月份菌根中外生菌根真菌的多样性最大,显著高于其他月份。（2）红松林外生菌根真菌群落组成受到土壤pH、有效磷含量、有效钾含量和土壤有效氮含量的影响,它们与外生菌根真菌优势属相对丰度呈现正相关或负相关。（3）根围土壤内真菌是影响红松根系外生菌根真菌相对丰度的另一重要因素,其中,包括普可尼亚属Pochonia、产丝齿菌属Hyphodontia、镰刀菌属Fusarium、Collembolispora、枝穗霉属Clonostachys、Apodus、鹅膏属Amanita在内的土壤真菌与根内外生菌根真菌的相对丰度呈线性关系。同时,超过85%的根内外生菌根真菌与同一取样地的土壤共有,可以认为侵染和扩散是红松根内外生菌根真菌群落形成的主要方式,同时兼有植物根系的选择,因为根内并不包括所有土壤中存在的外生菌根真菌,其机制需要进一步人工模拟试验验证。     

太行山片麻岩区栓皮栎外生菌根真菌多样性

以太行山片麻岩区栓皮栎Quercus variabilis为研究对象,利用形态学、常规测序与Illumina MiSeq高通量测序相结合的方法,调查并鉴定了与其共生的外生菌根真菌。最终共划分出18种栓皮栎外生菌根形态类型。高通量测序得到394个外生菌根真菌OTUs（operational taxonomic units）,隶属于11目23科30属。其中栓皮栎外生菌根核心菌群（core microbiome）共9属17个OTUs,总相对多度达65.16%。样地1与样地2中样本的多样性指数无明显差异,但非度量多维尺度分析（NMDS）表明核心菌群在2个样地中的分布不同,其中红菇属Russula、牛肝菌属Boletus、粉孢牛肝菌属Tylopilus、硬皮地星属Astraeus主要分布于位于阳坡的样地1,而空团菌属Cenococcum、小球孢盘菌属Sphaerosporella、锁瑚菌属Clavulina、丝盖伞属Inocybe主要分布于位于阴坡的样地2,毛革菌属Tomentella在两个样地的分布相似。     

四川都江堰亚热带针阔混交林中主要晚生型外生菌根真菌类群的空间分布

晚生型外生菌根真菌通常出现在森林演替的后期,是成熟林中的优势外生菌根真菌类群.对四川都江堰一片亚热带针阔混交林中的菌根真菌地上群落进行调查,并应用二元逻辑回归分析对晚生型外生菌根真菌的主要类群,即鹅膏菌科、牛肝菌科和红菇科,与周围(5 m×5 m样方)树种组成的关系进行研究.还应用次级变量分析方法对主要外生菌根真菌类群的空间格局进行了分析.结果表明,非外生菌根树种及某些外生菌根树种对特定类群菌根真菌子实体的出现有抑制作用,而不同类群外生菌根真菌在克隆生长上的差异并不是子实体空间分布的决定因素.我们认为,当研究自然林中外生菌根子实体的空间分布时,除了宿主植物的分布,也应考虑非宿主植物的分布以及菌根真菌相互作用的影响.     

Restoration of Aboveground Ectomycorrhizal Flora in Stands of Pinus sylvestris (Scots Pine) in The Netherlands by Removal of Litter and Humus

Species richness and sporocarp density of ectomycorrhizal fungi in stands of Pinus sylvestris (Scots pine) in The Netherlands have decreased during the last decades. The lowest species diversity was found in P. sylvestris stands situated in areas with high atmospheric deposition of nitrogen originating from intensive livestock industry. In these stands, litter and humus have accumulated into thick layers, and the herbaceous understory vegetation is dominated by the grass Deschampsia flexuosa (wavy hair grass). Earlier investigations showed negative correlations between the number of species of ectomycorrhizal fungi above ground and the depth of humus layers. Our aim was to investigate whether removal of litter, humus layers, and herbaceous vegetation (sods)—so-called "sod cutting"—increased species diversity above ground and sporocarp density of ectomycorrhizal fungi in P. sylvestris stands of different age. Therefore, three P. sylvestris stands of different ages (planted in 1987, 1963, and 1924) on Haplic Arenosol were selected. In 1990, litter, humus layers, and herbaceous vegetation were removed to create nutrient-poor sandy soils without overlying litter and humus layers. Untreated plots served as controls. Surveys conducted in 1991, 1992, and 1993 indicated that sod cutting enhanced the species diversity and sporocarp density of ectomycorrhizal fungi. These results suggest that sod cutting is a way to restore ectomycorrhizal flora in medium-aged and old stands of P. sylvestris where litter and humus have accumulated.     

The ectomycorrhizal flora of primary and secondary stands of Pinus sylvestris in relation to soil conditions and ectomycorrhizal succession

Abstract. Ectomycorrhizal species composition and sporocarp abundance in two 15–20-yr old primary stands of Pinus sylvestris in the central part of the Netherlands was compared with those in two 16- and 27-yr old secondary stands of P. sylvestris in the Northeast of the country. The trees of the primary stands were spontaneously seeded in a drifting sand area. Only thin litter and humus layers were present. The trees of the 16-yr old secondary stand were planted on podzolic sandy soil and those of the 27-yr old stand on non-podzolic sandy soil. In both secondary stands thick litter and humus layers had developed. The litter and humus partly originated from former stands at the same sites and partly from the present stands. In the secondary stands the thick litter and humus layers and herb vegetation were removed (‘sod-cutting’) in order to simulate the thin litter and humus layers in the primary stands. Control treatments were present. Surveys in 1991, 1992 and 1993 showed that sod-cutting enhanced both abundance and diversity of ectomycorrhizal fungi. However, species richness and diversity were higher in the primary stands than in the secondary ones, also even in the sod-cut plots. High species richness and diversity were associated with low concentrations of nitrogen and relatively high pH in the litter and humus layers, and in the mineral soil.     

Ectomycorrhizal fungal communities in late-successional Swedish boreal forests, and their composition following wildfire

This study was conducted to evaluate the effects of wildfires on ectomycorrhizal (EM) fungal communities in Scots pine ( Pinus sylvestris ) stands. Below- and above-ground communities were analysed in terms of species richness and evenness by examining mycorrhizas and sporocarps in a chronosequence of burned stands in comparison with adjacent unburned late-successional stands. The internal transcribed spacer (ITS)-region (rDNA) of mycobionts from single mycorrhizas was digested with three restriction enzymes and compared with an ITS–restriction fragment length polymorphism (RFLP) reference database of EM sporocarps. Spatial variation seemed to be more prominent than the effects of fire on the EM fungal species composition. Most of the common species tended to be found in all sites, suggesting that EM fungal communities show a high degree of continuity following low-intensity wildfires. Species richness was not affected by fire, whereas the evenness of species distributions of mycorrhizas was lower in the burned stands. The diversity of EM fungi was relatively high considering that there were only three EM tree species present in the stands. In total, 135 EM taxa were identified on the basis of their RFLP patterns; 66 species were recorded as sporocarps, but only 11 of these were also recorded as mycorrhizas. The species composition of the below-ground community of EM fungi did not reflect that of the sporocarps produced. EM fungal species present in our ITS–RFLP reference database accounted for 54–99% of the total sporocarp production in the stands, but only 0–32% of the mycorrhizal abundance.     

Partial restoration of fungal and plant species diversity by removal of litter and humus layers in stands of Scots pine in the Netherlands

A field experiment was set up in five mature Scots pine (Pinus sylvestris) stands in the Netherlands in order to study the effects of removal of litter and humus on ectomycorrhizal fungi and vegetation of higher plants, bryophytes, and lichens. Lime was also applied as a countermeasure to the removal of surplus cations. Application of lime did not have significant effects on mycorrhizal fungi. Removal of ectorganic material increased species richness of ectomycorrhizal fungi. The number of fruit bodies was also higher in the sod-cut plots, but the difference compared with the controls was not significant in all years. A major effect of removal of the ectorganic layer was a reversion of ectomycorrhizal succession to earlier stages. Liming increased the number and cover of ruderal, nitrophilous plant species. Sod-cutting caused a reversion of the green vegetation to earlier successional stages.     

Effects of manipulation of litter and humus layers on ectomycorrhizal colonization potential in Scots pine stands of different age

Effects of manipulation of litter and humus layers (removal, doubling and control treatments) on the colonization potential of ectomycorrhizal fungi were studied in two secondary stands of Pinus sylvestris (5 and 18 years old) in The Netherlands. Five-mont-hold, sterile-grown Scots pine seedlings, inoculated with Laccaria bicolor, Paxillus involutus or Rhizopogon luteolus and noninoculated seedlings were used as baits. The seedlings were harvested after one growing season. For comparison, sporocarps of ectomycorrhizal fungi were also investigated. Genus composition on the seedlings was independent of initial inoculum, but determined by both treatment and age of the stands. In both stands, removal of litter and humus layers increased, and addition of organic material decreased the number of ectomycorrhizal types on the seedlings. Not all indigenous genera were observed by either outplanting seedlings or sporocarp surveys.     

Differential hypogeous sporocarp production from Nothofagus dombeyi and N. pumilio forests in southern Argentina

Mycorrhizal fungi that form hypogeous sporocarps are an important component of the temperate forest soil community. In many regions, such as the Nothofagus forest in the Patagonian Andes, this group of fungi has been poorly studied. Here we examined the spring and autumn community composition of "sequestrate fungi", based on sporocarp production in pure forests of Nothofagus dombeyi (evergreen) and N. pumilio (deciduous). We investigated the possible relationships between these communities and environmental factors over 2 y. The rarefaction curves and the minimal richness estimates converged at nearly the same level for each forest type, and the asymptotes suggested that the sampling effort was sufficient to capture most of the hypogeous sporocarp richness in these forest stands. In total 27 species were recovered. Basidiomycota, Ascomycota and Glomeromycota respectively accounted for nine, two and one genera. Species richness of hypogeous sporocarps varied in relation to forest type but not to season (fall and spring), whereas sporocarp biomass varied according to an interaction between season and forest type. Species richness and sporocarp biomass were positively correlated with rainfall and negatively correlated with altitude. In addition sporocarp species richness was positively related to number of trees per transect. We found that two different forest stands, each dominated by different species of Nothofagus, exhibited different hypogeous sporocarp communities.     

Local and landscape drivers of biodiversity of four groups of ants in coffee landscapes

Agriculture of varying management intensity dominates fragmented tropical areas and differentially impacts organisms across and within taxa. We examined impacts of local and landscape characteristics on four groups of ants in an agricultural landscape in Chiapas, Mexico comprised of forest fragments and coffee agroecosystems varying in habitat quality. We sampled ground ants found in leaf litter and rotten logs and arboreal ants found in hollow coffee twigs and on tree trunks. Then using vegetation and agrochemical indices and conditional inference trees, we examined the relative importance of local (e.g. vegetation, elevation, agrochemical) and landscape variables (e.g. distance to and amount of nearby forest and rustic coffee) for predicting richness and abundance of ants. Leaf litter ant abundance increased with vegetation complexity; richness and abundance of ants from rotten logs, twig-nests, and tree trunks were not affected by vegetation complexity. Agrochemical use did not affect species richness or abundance of any ant group. Several local factors (including humus mass, degree of decay of logs, number of hollow twigs, tree circumference, and absence of fertilizers) were significant positive predictors of abundance and richness of some ant groups. Two landscape factors (forest within 200 m, and distance from forest) predicted richness and abundance of twig-nesting and leaf litter ants. Thus, different ant groups were influenced by different characteristics of agricultural landscapes, but all responded primarily to local characteristics. Given that ants provide ecosystem services (e.g. pest control) in coffee farms, understanding ant responses to local and landscape characteristics will likely inform farm management decisions.     

Does selective logging change ground‐dwelling beetle assemblages in a subtropical broad‐leafed forest of China?

Selective logging with natural regeneration is advocated as a near‐to‐nature strategy and has been implemented in many forested systems during the last decades. However, the efficiency of such practices for the maintenance of forest species are poorly understood. We compared the species richness, abundance and composition of ground‐dwelling beetles between selectively logged and unlogged forests to evaluate the possible effects of selective logging in a subtropical broad‐leafed forest in southeastern China. Using pitfall traps, beetles were sampled in two naturally regenerating stands after clearcuts (ca. 50 years old, stem‐exclusion stage: selectively logged 20 years ago) and two mature stands (> 80 years old, understory re‐initiation stage: selectively logged 50 years ago) during 2009 and 2010. Overall, selective logging had no significant effects on total beetle richness and abundance, but saproxylic species group and some abundant forest species significantly decreased in abundance in selectively logged plots compared with unlogged plots in mature stands. Beetle assemblages showed significant differences between selectively logged and unlogged plots in mature stands. Some environmental characteristics associated with selective logging (e.g., logging strategy, stand age, and cover of shrub and moss layers) were the most important variables explaining beetle assemblage structure. Our results conclude that selective logging has no significant impacts on overall richness and abundance of ground‐dwelling beetles. However, the negative effects of selective logging on saproxylic species group and some unlogged forest specialists highlight the need for large intact forested areas for sustaining the existence of forest specialist beetles.     

Fungal Diversity of Norway Spruce Litter: Effects of Site Conditions and Premature Leaf Fall Caused By Bark Beetle Outbreak

Fungi play an important role in leaf litter decomposition due to their ability to break down the lignocellulose matrix, which other organisms are unable to digest. However, little is known regarding the factors affecting components of fungal diversity. Here, we quantified richness of internal fungi in relation to litter nutrient and phenolic concentrations, sampling season (spring or fall), and premature leaf shedding due to low precipitation and infestation of bark beetles (mainly Ips typographus and Ips duplicatus). The study was conducted in 37-year-old Norway spruce [Picea abies (L.) Karst.] stands, with three plots each in mixed forest (MF) and coniferous forest (CF) site conditions in south-central Poland. Fifty-four species of sporulating fungi were identified in 2,330 freshly fallen needles sampled during 2003-2005, including 45 species in MF and 31 in CF. The significantly higher number of species in MF was likely related to moister conditions at that site. Among isolated fungi, 22% (12 species) were identified as endophytes of Norway spruce in prior studies. During spring of 2005, we found less than half the number of isolates and fungal species at each forest site as compared to fall for the two prior years. This pattern was observed in typical soil fungi (e.g., Penicillium daleae, Penicillium purpurogenum) and endophytes/epiphytes (e.g., Aureobasidium pullulans, Alternaria alternata, Cladosporium spp., and Lophodermium piceae). Premature shedding of needles was the most likely cause of this decline because it shortened the time period for fungi to infect green needles while on the tree. For all sites and sampling periods, richness of internal fungi was strongly and positively related to the age of freshly fallen litter (assessed using needle Ca concentration as a needle age tracer) and was also negatively related to litter phenolic concentration. Richness of internal fungi in freshly fallen litter may be adversely affected by low soil moisture status, natural inhibitors slowing fungal colonization (e.g., phenolics) and biotic (e.g., insect infestation) and abiotic (e.g., drought) factors that shorten leaf life span.