东亚-澳大利亚迁徙路线上鸻形目水鸟适宜生境变化:以崇明东滩迁徙停歇地为例

崇明东滩湿地是鸻形目水鸟东亚-澳大利亚迁徙路线上的重要迁徙停歇地。本文借助Landsat ETM+遥感影像对研究地区2000—2010年鸻形目水鸟适宜生境(海三棱藨草和滩涂湿地)的变化进行动态监测,并借助FRAGSTATS景观指数对适宜生境的景观特征进行分析。结果表明,鸻形目水鸟的适宜生境的总面积为10305.52 hm2,仅次于深水区湿地(15918.66 hm2)。海三棱藨草和滩涂湿地的总面积在2000—2006年缓慢增加(从10448.2hm2增加到10696.5 hm2)。海三棱藨草和滩涂湿地面积的增加主要由深水区湿地转化而来,而其面积的减少主要被芦苇和互花米草湿地所取代。与2000年相比,海三棱藨草和滩涂湿地的景观异质性和破碎程度在2010年趋于增加(2000—2006年趋于增加,2006—2010年趋于下降)。在整个景观尺度上,所有湿地的异质性和破碎程度在2000—2006年趋于增加,而在2006—2010年趋于下降。从景观特征来看,研究地区鸻形目水鸟适宜生境的质量(生境组成/要素配置、复杂性、连接性和异质性等)在2000—2006年趋于下降,而在2006—2010年趋于增加。本文结果有助于指导湿地修复与营造策略的制定,以更好地实现在长江河口湿地保护迁徙鸻形目水鸟。     

基于RS和GIS技术的河北省鸡形目鸟类分布格局

收集和整理河北省鸡形目鸟类的分布资料,借助GIS的绘图功能,把解译的遥感影像数据数字化为植被类型图和地貌图;根据文献和标本记录的地理位置和野外考察记录,做出河北省鸡形目鸟类的点分布图;根据鸡形目鸟类与其生境之间的相互依赖关系,定义鸡形目鸟类的适宜生境类型,利用GIS技术的分析、提取和叠加功能,提取每种鸡形目鸟类的适宜生境类型图,预测河北省鸡形目鸟类的总体分布格局。结果表明：河北省鸡形目鸟类物种丰富度地区主要集中在坝上高原区和燕山太行山山地区;河北省鸡形目鸟类可分为全省广布种(鹌鹑和雉鸡)、燕山太行山山地和坝上高原分布种(石鸡、斑翅山鹑、勺鸡)和局部地区特征种(黑琴鸡、黑嘴松鸡、花尾榛鸡、褐马鸡)3种类型。     

基于MaxEnt模型的渤海湾沿岸鸻鹬类栖息地适宜性评价

渤海湾沿岸是鸻鹬类迁徙路线的重要栖息地。由于自然和人为原因,栖息地面积减少,质量恶化。因此,开展渤海湾沿岸鸻鹬类栖息地适宜性评价,对湿地生物多样性保护有重要意义。基于鸻鹬类点位信息和环境因子数据,利用MaxEnt模型对渤海湾沿岸2000年和2015年鸻鹬类栖息地适宜性进行评价。结果表明:土地利用/覆被、NDVI、年均气温、坡向是影响鸻鹬类分布的主要因子;鸻鹬类适宜栖息地主要分布在河北唐山南部和天津滨海地区。研究时段内渤海湾沿岸适宜栖息地面积总体有所下降,河北适宜栖息地面积下降,天津和山东增加;栖息地适宜性增加地区主要集中于天津南部、山东东南部,下降地区主要分布在河北丰南、黄骅及天津宁河县。该研究可识别渤海湾沿岸鸻鹬类适宜栖息地的分布范围及变化趋势,对该区域鸻鹬类保护及栖息地管理具有重要参考意义。     

基于MaxEnt模型的渤海湾沿岸鸻鹬类栖息地适宜性评价

渤海湾沿岸是鸻鹬类迁徙路线的重要栖息地。由于自然和人为原因,栖息地面积减少,质量恶化。因此,开展渤海湾沿岸鸻鹬类栖息地适宜性评价,对湿地生物多样性保护有重要意义。基于鸻鹬类点位信息和环境因子数据,利用MaxEnt模型对渤海湾沿岸2000年和2015年鸻鹬类栖息地适宜性进行评价。结果表明:土地利用/覆被、NDVI、年均气温、坡向是影响鸻鹬类分布的主要因子;鸻鹬类适宜栖息地主要分布在河北唐山南部和天津滨海地区。研究时段内渤海湾沿岸适宜栖息地面积总体有所下降,河北适宜栖息地面积下降,天津和山东增加;栖息地适宜性增加地区主要集中于天津南部、山东东南部,下降地区主要分布在河北丰南、黄骅及天津宁河县。该研究可识别渤海湾沿岸鸻鹬类适宜栖息地的分布范围及变化趋势,对该区域鸻鹬类保护及栖息地管理具有重要参考意义。     

东海大桥海上风电场对鸟类组成的影响

以东海大桥海上风电场2007年开工建设为分界点,收集区域附近南汇东滩1997—2006年鸟类观测资料、洋山港2005—2006年周年鸟类观测资料,并与相同调查区域2012年5月—2013年6月观测资料进行物种数、种类组成及数量组成等比较分析,结果表明:区域鸟类的物种数并未产生明显的变化,鸻形目鸟类种类比例有所下降,雀形目种类增加明显,但鸻形目鸟类数量仍占明显优势,这一变化是由风电场建设、近岸其他工程建设、区域陆化发展、生境条件改变等综合作用的结果。风电场区域的视频观测没有记录到鸟类活动的情况,推测风电场场址已避开迁徙主要通道,或表明鸟类对其产生规避。     

云南大山包黑颈鹤自然保护区鸟类多样性及其与生境结构的关系

2015—2016年4个季节,采用样线法和样点法结合调查鸟类并基于遥感信息分析生境结构,研究了大山包自然保护区9个1 km~2样点鸟类多样性及其与生境的关系。结果表明:大山包共有鸟类16目41科127种,包含国家重点保护鸟类14种;雀形目、雁形目、鸻形目鸟类为主,共27科80种,数量最多的是斑头雁(Anser indicus)、小云雀(Alauda gulgula)、黑颈鹤(Grus nigricollis),共占总数量的50.09%;种类以留鸟(占49.61%)和鸣禽(51.97%)为主,数量以冬候鸟(58.13%)和水鸟(60.28%)为主;40.94%的种类和60.28%的数量均偏好水域湿地生境类型;Pearson相关系数表明,水域面积占比与冬季和春季鸟类数量显著相关(P0.05),森林-灌丛面积占比与夏季和秋季鸟类种类显著相关(P0.05);大山包是重要的鸟类栖息地和越冬地,其生境结构对鸟类种类和数量有巨大影响;营建水域、森林-灌丛、沼泽湿地等多种生境类型及其空间组合,是保护大山包鸟类多样性的重要途径。     

鄱阳湖都昌候鸟自然保护区丰水期和枯水期鸟类多样性

2009年12月和2010年5月,利用样线法和同步调查法对江西省鄱阳湖都昌候鸟自然保护区的鸟类开展了调查,分析了丰水期和枯水期鸟类群落结构的特征及其差异.野外调查共记录到鸟类14目43科169种.丰水期鸟类有36科96种,枯水期鸟类36科135种.其中,国家重点保护鸟类17种.结合保护区日常监测到白鹤(Grus leucogeranus)、灰鹤(G.grus)、白头鹤(G.monacha)和白枕鹤(G.vipio)的分布记录,该保护区鸟类累计达173种.保护区枯水期鸟类以雀形目、鹆形目和雁形目为主,分别占枯水期鸟类种类总数的47.4％、13.3％和9.6％;丰水期鸟类以雀形目、鸻形目和鹳形目为主,分别占鸟类种类总数的58.3％、8.3％和10.4％.枯水期和丰水期鸟类物种组成存在明显的季节性变换.枯水期农田生境鸟类多样性最高,其次是草洲、沼泽和水体,泥滩生境鸟类多样性最低;丰水期农田和水体生境鸟类多样性基本相同.都昌候鸟自然保护区枯水期的优势种为八哥(Acridotheres cristatellus)、白头鹎(Pycnonotus sinensis)、灰椋鸟(Sturnus cineraceus)、麻雀(Passer montanus)和山斑鸠(Streptopelia orientalis),丰水期为白鹭(Egretta garzetta)和八哥.     

九段沙湿地鸻形目鸟类迁徙季节环境容纳量

根据对九段沙湿地2005年春、秋季食物资源调查来计算迁徙期鸻形目鸟类的环境容纳量。结果表明，九段沙湿地春季食物总量为4541．20kgAFDW（去灰分干重），秋季为2279．64kgAFDW，按鸻形目鸟类有效栖息生境计算，春季鸟类可利用食物资源量为3429．03kgAFDW，秋季为1700．92kgAFDW。通过鸟类体型类群分类（根据去脂净重、基础代谢率和体长）和能量消耗模型可以得出，九段沙湿地迁徙季节总食物量理论上可维持的鸻形目鸟类最大数量约为春季350万只，秋季175万只。按有效生境计算，春季约为260万只，秋季约为130万只。考虑到食物取入率的影响，九段沙湿地实际可容纳约13～26万只鸟类。根据地理信息分析可知，高潮位期有效栖息地的缺乏可能是限制鸟类数量达到估计上限的主要原因，建议在不危害保护区生态安全的前提下，开辟一些隐蔽性强的裸地和浅水塘，以提高鸻形目鸟类对九段沙湿地资源的利用率。     

遥感与GIS支持下的崇明东滩迁徙鸟类生境适宜性分析

崇明东滩鸟类自然保护区位于长江入海口,是国际迁徙鸟类重要的栖息地.受自然和社会因素影响,该地区鸟类栖息环境正处于快速变化.研究采用面向对象的图像分割方法提取鸟类生境适宜性多边形评价单元,根据近年来野外调查数据分析了影响迁徙鸟类生存的地类、植被、潮沟、底栖生物等关键环境因素,建立了鸟类与关键环境影响因素的定性定量关系.在此基础上利用GIS空间分析方法和技术,进行了崇明东滩鸟类保护区内主要四大鸟类种群雁鸭类、鸻鹬类、鹭类以及鸥类的生境适宜性分析.结果表明:(1)崇明东滩迁徙鸟类生境较适宜的面积占保护区总面积40%左右;(2)光滩区域、与光滩邻近的海三棱藨草带以及潮沟地带是鸟类生境适宜性较好的地理区域;(3)基于面向对象的遥感分析技术和GIS空间分析技术,能有效且简便地对生态环境处于快速动态变化中的物种生境适宜性进行快速、客观准确的分析评价,其结果可为崇明东滩鸟类种群及其生存环境规划、保护和管理提供基础科学依据.     

鸻形目鸟类线粒体基因组测序策略

鸻形目（Charadriiformes）,全世界约有384个物种,分属于19科94属,种类繁多、分布广泛,是研究迁徙和觅食行为的良好材料。近年来,线粒体基因组的研究快速发展,由于样品难以收集,缺乏系统的测序策略,鸻形目鸟类线粒体基因组的研究相对滞后。引物设计对聚合酶链式反应（PCR）至关重要,一个成功的PCR实验依赖于高质量的特异性引物,本研究拟设计一套用于鸻形目鸟类线粒体基因组扩增的通用引物。对GenBank中现有的鸻形目物种线粒体基因组进行多重比对,发现若干个保守性区域,本研究在该区域设计13对扩增鸻形目鸟类线粒体基因组的通用引物,扩增的目的片段长度均在1.5 kb左右。我们选取4个物种,即灰头麦鸡（Vanellus cinereus）、丘鹬（Scolopax rusticola）、白腰草鹬（Tringa ochropus）和针尾沙锥（Gallinago stenura）,进行PCR扩增验证,设计的引物在4个物种中均能顺利扩增、测序,该引物在鸻形目鸟类线粒体基因组扩增中的具有普遍适用性。本研究设计的13对通用引物在扩增鸻形目物种线粒体全基因组中具有较强的应用价值,将为鸻形目的系统发育关系、种群遗传学和生物地理学研究提供珍贵的资源。     

A Unique Protease Cleavage Site Predicted in the Spike Protein of the Novel Pneumonia Coronavirus (2019-nCoV) Potentially Related to Viral Transmissibility

正Dear Editor,In December 2019, a novel human coronavirus caused an epidemic of severe pneumonia(Coronavirus Disease 2019,COVID-19) in Wuhan, Hubei, China(Wu et al. 2020; Zhu et al. 2020). So far, this virus has spread to all areas of China and even to other countries. The epidemic has caused 67,102 confirmed infections with 1526 fatal cases     

Curcuminoids as inhibitors of thioredoxin reductase: A receptor based pharmacophore study with distance mapping of the active site

Curcumin is the yellow pigment of turmeric that interacts irreversibly forming an adduct with thioredoxin reductase (TrxR), an enzyme responsible for redox control of cell and defence against oxidative stress. Docking at both the active sites of TrxR was performed to compare the potency of three naturally occurring curcuminoids, namely curcumin, demethoxy curcumin and bis-demethoxy curcumin. Results show that active sites of TrxR occur at the junction of E and F chains. Volume and area of both cavities is predicted. It has been concluded by distance mapping of the most active conformations that Se atom of catalytic residue SeCYS498, is at a distance of 3.56 from C13 of demethoxy curcumin at the E chain active site, whereas C13 carbon atom forms adduct with Se atom of SeCys 498. We report that at least one methoxy group in curcuminoids is necessary for interation with catalytic residues of thioredoxin. Pharmacophore of both active sites of the TrxR receptor for curcumin and demethoxy curcumin molecules has been drawn and proposed for design and synthesis of most probable potent antiproliferative synthetic drugs.     

Comparative morphology of the carpel in the Liliaceae: Hewardieae, Petrosavieae, and Tricyrteae

The young pistils in the melanthioid tribes, Hewardieae, Petrosavieae and Tricyrteae, are uniformly tricarpellate and syncarpous. They lack raphide idioblasts. All are multiovulate, with bitegmic ovules. The Petrosavieae are marked by the presence of septal glands and incomplete syncarpy. Tepals and stamens adhere to the ovary in the Hewardieae and the Petrosavieae but not in the Tricyrteae. Two vascular bundles occur in the stamens of the Hewartlieae and Tricyrtis latifolia. Ventral bundles in the upper part of the ovary of the Hewardieae are continuous with compound septal bundles and placental bundles in the lower part. Putative ventral bundles occur in the alternate position in the Tricyrteae and putative placental bundles in the opposite. position in the Petrosavieae. The dichtomously branched stigma in each carpel of the Tricyrteae is supplied by a bifurcated dorsal bundle.     

Enterovirus 71 3C proteolytically processes the histone H3 N-terminal tail during infection

Highlights
1. The N-terminal tail of histone H3 is specifically cleaved during EV71 infection.
2. Viral protease 3C is identified as a protease responsible for proteolytically processing the N-terminal H3 tail.
3. Our finding reveals a new epigenetic regulatory mechanism for Enterovirus 71 in virus-host interactions.     

Detection of EBV and HHV6 in the Brain Tissue of Patients with Rasmussen’s Encephalitis

Rasmussen’s encephalitis (RE) is a rare pediatric neurological disorder, and the exact etiology is not clear. Viral infection may be involved in the pathogenesis of RE, but conflicting results have reported. In this study, we evaluated the expression of both Epstein-Barr virus (EBV) and human herpes virus (HHV) 6 antigens in brain sections from 30 patients with RE and 16 control individuals by immunohistochemistry. In the RE group, EBV and HHV6 antigens were detected in 56.7% (17/30) and 50% (15/30) of individuals, respectively. In contrast, no detectable EBV and HHV6 antigen expression was found in brain tissues of the control group. The co-expression of EBV and HHV6 was detected in 20.0% (6/30) of individuals. In particular, a 4-year-old boy had a typical clinical course, including a medical history of viral encephalitis, intractable epilepsy, and hemispheric atrophy. The co-expression of EBV and HHV6 was detected in neurons and astrocytes in the brain tissue, accompanied by a high frequency of CD8⁺ T cells. Our results suggest that EBV and HHV6 infection and the activation of CD8⁺ T cells are involved in the pathogenesis of RE.     

Perinatal Vertical Transmission of Chikungunya Virus in Ruili,a Town on the Border between China and Myanmar

正Dear Editor,Chikungunya virus (CHIKV), an arbovirus in the family of Togaviridae, genus Alphavirus, is transmitted by the A.aegyptii or A. albopictus mosquito, and causes disease in humans characterized by fever, rash, and arthralgia (Silva and Dermody 2017; Suhrbier 2019). It was first reported in 1953 in Tanzania, and caused only a few outbreaks and sporadic cases in Africa and Asia in last century. However, in the epidemic in 2004, CHIKV acquired mutations that conferred enhanced transmission by the A. albopictus mosquito(Schuffenecker et al. 2006). Since then, it has successively caused outbreaks in Africa, the Indian Ocean, South East Asia, the South America, and Europe (Zeller et al. 2016).     

Development of a Novel Reverse Transcription Loop-Mediated Isothermal Amplification Method for Rapid Detection of SARS-CoV-2

In conclusion, the novel visual RT-LAMP assay is a simple, rapid, and sensitive approach for detection of SARS-CoV-2, and it is ready for application in primary care and community hospitals or health care centers, and even patients' own houses in response to the current SARS-CoV-2 epidemic because the assay does not require sophisticated equipment and skilled personnel. Furthermore, it is also ready to be used in fields for screening samples from wild animals and environments to facilitate the identification of potential intermediate hosts that mediate the cross-species transmission of SARS-CoV-2 from bats to humans.