HSV-1感染人成纤维细胞中HTRP基因的生物信息学分析

依靠生物信息技术对HSVI型病毒刺激KMB-17细胞后克隆得到的差异基因HTRP和其编码蛋白序列的特征进行了分析和顶测,初步推测了该基因的转录调控序列和编码蛋白的结构特点,为深入研究病毒刺激后细胞基因表达所编码序列的功能提供了基本数据.     

SiRNA抑制柯萨奇B3病毒的复制和表达

目的 研究观察体外合成siRNA对培养HELA细胞中柯萨奇B3病毒（Coxsackievirus B3,CVB3）的影响。方法根据siRNA靶序列设计原则,针对编码CVB3病毒聚合酶、VP1蛋白和5’非编码区基因组,特异性地体外合成三对siRNA,同时合成一对与CVB基因组序列无关的阴性对照siRNA。利用脂质体转染进入Hela细胞,用CVB3感染培养HELA细胞,观察转染后HELA细胞病变;采用RT-PCR技术检测感染CVB3各组的病毒RNA;用免疫荧光技术检测各组CVB3蛋白的表达;并用培养细胞上清液再感染HELA细胞观察病毒滴度。结果针对CVB3病毒聚合酶的siR-NA能有效的抑制病毒的复制和CVB3蛋白的表达,并能抑制病毒的再感染;而针对VP1蛋白和5’非编码区的siRNA能部分抑制病毒的复制和CVB3蛋白的表达。结论我们设计合成针对编码CVB3病毒聚合酶基因组的siRNA能有效抑制CVB3病毒复制和表达。     

HBx蛋白与Hepsin共表达可促进HBV复制

运用RT-PCR技术从原发性肝癌(Hepatocellularcarcinoma,HCC)患者的癌旁组织中扩增了Hepsin基因编码区序列,该序列已被克隆并构建了pCMV-tag-HS表达质粒.将pCMV-tag-HS表达质粒和表达HBx蛋白的载体共转染HepG2.2.1.5细胞,观察HBx蛋白和Hepsin蛋白相互作用对HBV病毒复制和病毒蛋白表达的影响.研究结果表明共表达HBx蛋白、Hepsin蛋白可以协同提高HBV病毒颗粒在培养液中的拷贝数,并提高HBV病毒蛋白HBs、HBe的表达水平.这说明HBx蛋白和Hepsin蛋白相互作用可以增强HBV病毒的复制.     

HzAm1细胞rpL13基因的序列分析及病毒感染对其转录水平的影响

从美洲棉铃虫细胞(HzAM1)中克隆了核糖体大亚基蛋白L13(RibosomalproteinL13,RpL13)的cDNA及其基因组DNA序列,并进行了序列分析。其编码框为666bp,无内含子,预测编码大小约为25kDa的蛋白。通过与其它15种动物的RpL13编码框序列进行进化分析,发现聚类结果与传统物种分类一致。转录研究表明,棉铃虫核型多角体病毒(Helicoverpaarmigerasinglenucleocapsidnucleopolyhedrovirus,HaSNPV)感染HzAm1后使rpL13在细胞内的转录水平降低,在病毒感染后96h,rpL13mRNA的拷贝数降到对照健康细胞的8%。     

copGFP和PuroR双标记基因慢病毒融合表达载体的构建及应用*

目的: 构建具有绿色荧光蛋白(copGFP)和嘌呤霉素抗性基因(PuroR)融合表达双筛选标记的慢病毒过表达载体,检测其嘌呤霉素抗性和绿色荧光蛋白表达的特性。方法: 从pCDH-CMV-MCS-copGFP载体中扩增copGFP编码区DNA序列,从pLKO.1载体中扩增Puro^R编码区DNA序列,运用重组PCR方法,扩增copGFP与Puro^R基因融合编码序列并克隆至经BamH Ⅰ+Sal Ⅰ双酶切的pCDH-CMV-MCS-copGFP载体片段中,构建含copGFP和Puro^R融合表达双筛选标记的慢病毒过表达载体;载体的融合标签序列进行测序确证;将该载体用辅助包装质粒PLP1、PLP2、VSVG在293T细胞中包装成慢病毒后感染肝癌细胞MHCC97H,检测感染细胞对嘌呤霉素的抵抗作用以及绿色荧光蛋白的表达情况;为验证该载体表达外源目的基因的有效性,将Sp1编码区DNA序列插入该载体中包装成慢病毒,用对照及表达Sp1的慢病毒感染肝癌细胞MHCC97H,感染细胞经1 mg/ml嘌呤霉素筛选7 d后获得稳定感染细胞株,提取稳定感染细胞的总RNA及总蛋白,分别运用RT-qPCR和Western blot方法检测Sp1在对照及表达Sp1的慢病毒感染的肝癌MHCC97H细胞中的mRNA和蛋白表达水平的差异。结果: 成功构建含copGFP和Puro^R融合表达双筛选标记的慢病毒过表达载体;该载体与辅助质粒包装出的慢病毒感染肝癌细胞后,感染细胞同时具有嘌呤霉素抗性和表达绿色荧光蛋白特性;将Sp1编码序列插入该载体,包装慢病毒并肝癌细胞,Sp1 的mRNA水平对照细胞相比分别升高3.3倍,蛋白水平升高2.2倍(P＜0.01)。 结论: 成功构建含copGFP和Puro^R融合表达双筛选标记的慢病毒过表达载体,该载体编码的融合双标记基因具有嘌呤霉素抗性和绿色荧光蛋白表达的特性,可高水平表达长片段的目的基因。     

HBx蛋白与Hepsin共表达可促进HBV复制

运用RT-PCR技术从原发性肝癌(Hepatocellular carcinoma,HCC)患者的癌旁组织中扩增了Hepsin基因编码区序列,该序列已被克隆并构建了pCMV-tag-HS表达质粒。将pCMV-tag-HS表达质粒和表达HBx蛋白的载体共转染HepG2．2．1．5细胞,观察HBx蛋白和Hepsin蛋白相互作用对HBV病毒复制和病毒蛋白表达的影响。研究结果表明共表达HBx蛋白、Hepsin蛋白可以协同提高HBV病毒颗粒在培养液中的拷贝数,并提高HBV病毒蛋白HBs、HBe的表达水平。这说明HBx蛋白和Hepsin蛋白相互作用可以增强HBV病毒的复制。     

HzAm1细胞rpL13基因的序列分析及病毒感染对其转录水平的影响

从美洲棉铃虫细胞(HzAM1)中克隆了核糖体大亚基蛋白L13(Ribosomal protein L13,RpL13)的cDNA及其基因组DNA序列,并进行了序列分析.其编码框为666bp,无内含子,预测编码大小约为25 kDa的蛋白.通过与其它15种动物的RpL13编码框序列进行进化分析,发现聚类结果与传统物种分类一致.转录研究表明,棉铃虫核型多角体病毒(Helicoverpa armigera single nucleocapsid nucleopolyhedrovirus,HaSNPV)感染HzAm1后使rpL13在细胞内的转录水平降低,在病毒感染后96h,rpL13 mRNA的拷贝数降到对照健康细胞的8%.     

森林脑炎病毒分子生物学研究进展

森林脑炎(TBE)病毒属黄病毒科,基因姐RNA含有单个开放阅读框架,5′端编码病毒的结构蛋白,3′端编码非结构蛋白。翻译成聚蛋白后,通过细胞和病毒编码的蛋白酶裂解产生单个的病毒蛋白。成熟的病毒是由两个相关的E和M膜蛋白脂质包膜所包围的立体对称的核衣壳组成。包膜E蛋白在病毒的感染周期中对细胞的识别和穿入细胞具有极其重要的功能,同时E蛋白诱导保护性的免疫反应,E蛋白内某一位点单个氨基酸的改变可引起病毒毒力的改变。因此,对TBE病毒分子生物学的研究有助于了解病毒与宿主细胞相互作用的机理,为病毒感染的特异性诊断、疫苗的研制和抗病毒药物的设计提供理论依据。     

伪狂犬病病毒鄂A株包膜糖蛋白gD基因的克隆与表达

克隆了伪狂犬病病毒鄂A株编码包膜糖蛋白gD的基因并进行了序列测定 ,与国外报道的Rice株相比 ,其核苷酸序列具有 98%的同源性 ,推导氨基酸序列同源性为 97%。将此基因克隆于具有全期启动子盒的杆状病毒转移载体pSX35A中 ,构建成重组转移质粒pSX35A gD ,与致死缺失型线性化苜蓿丫纹夜蛾核型多角体病毒 (AcMNPV OCC- )基因组DNA一起共转染粉纹夜蛾Hi5细胞 ,经同源重组 ,获得含gD基因的重组病毒AcMNPV OCC+ gD。重组病毒经空斑纯化后感染Hi5细胞进行表达分析 ,细胞裂解物的SDS PAGE及Western Blot ting均显示分子量约 47kD的gD蛋白得到了特异性表达 ,其表达量占细胞总蛋白的 6 2 % ,表达的gD蛋白具有免疫原性。     

长链非编码RNANRAV在抗病毒应答中对干扰素刺激基因(ISG)转录的调控作用

<正>天然免疫是宿主抵抗病毒的第一道防线。病毒侵染宿主后,宿主的病原识别受体(PRR)鉴别出病毒的核酸或蛋白质组分,激活抗病毒天然免疫应答。一系列天然免疫信号通路被PRR激活,通路下游的转录因子随之活化并进入细胞核,核内各种免疫相关基因依次开始转录调控。首先,干扰素大量表达并被分泌至细胞外,随后上百种干扰素刺激基因(ISG)转录表达。这些ISG蛋白分布至细胞内外,通过多种机制抵御病毒的感染复制,以清除机体内的病毒。长链非编码RNA(Long non-coding RNA,lnc RNA)是一类长度大于200nt、不具有蛋白编码特性的RNA分子。近年来大量实验证据表明,长链非编码RNA在细胞     

Helper activity in antigen-specific antibody production mediated by CD4+ human cytotoxic T cell clones directed against herpes simplex virus

Three HSV type 1 (HSV-1) and HSV type 2 (HSV-2) common ("HSV-type common") and three HSV-1 specific CTL clones, which were CD3+, CD4+, CD8-, 4B4+, and 2H4-, were established. These clones proliferated in response to stimulation with HSV in the presence of autologous APC. The HSV type specificity of the proliferative response was identical with that of the cytotoxic activity of the clones. The cytotoxic activity and the proliferative response were both inhibited by addition of anti-HLA-DR mAb to the culture. After culture of these CTL clones with autologous B cells and macrophages followed by HSV Ag stimulation, anti-HSV antibody was detected in the culture supernatant. The HSV type specificity of the helper function for antibody production was identical with that of the cytotoxicity, i.e., HSV-type common clones, upon stimulation with either HSV-1, or HSV-2, and HSV-1-specific clones, upon stimulation with HSV-1 but not with HSV-2, showed helper activity for anti-HSV antibody production by autologous B cells. Moreover, it was found that these clones produced humoral factors which help autologous B cells to produce antibody. The helper factors were produced by T cell clones in an HSV-type-specific manner. These data suggest that some CD4+ T cells can simultaneously manifest both specific cytotoxicity and helper activity for Ag-specific antibody production by B cells, and that these multifunctional T cells might play an important role in protection against viral infection.     

Human cytotoxic T cell clones directed against herpes simplex virus-infected cells. II. Bifunctional clones with cytotoxic and virus-induced proliferative activities exhibit herpes simplex virus type 1 and 2 specific or type common reactivities

Human cytotoxic T lymphocyte (CTL) clones directed against herpes simplex virus (HSV)-infected cells were generated after stimulation of peripheral blood lymphocytes (PBL) with HSV type 1 (HSV-1) and HSV type 2 (HSV-2). These CTL clones were studied with regard to HSV type specificity and with regard to whether they also express helper cell activity. Some clones, generated after stimulation with HSV-1, were cytotoxic for autologous cells infected with either HSV-1 or HSV-2 ("HSV type common clones"), whereas other clones lysed HSV-1-infected cells only ("type-specific clones"). Similarly, after HSV-2 stimulation, both HSV-2 specific and HSV type common clones were obtained, indicating the heterogeneity of human cytotoxic T cells to HSV. All CTL clones tested were found to be bifunctional in that they also proliferated in response to stimulation with HSV. The HSV type specificity of the proliferative response was identical to that of the cytotoxic activity of the clones. An HSV type common clone, when stimulated with either HSV-1 or HSV-2, and an HSV-1 specific clone, when stimulated with HSV-1 but not with HSV-2, produced a factor, presumably interleukin 2 (IL 2), which induced proliferation of CTLL, an IL 2-dependent T cell line, providing evidence that our HSV-directed CTL clones also express helper cell activity. CTL clones that we previously reported were restricted in cytotoxic activity by HLA class II DR-1 or MB-1 antigens were found, in this study, to be restricted in proliferative response to HSV by these same HLA antigens. These results suggest that our bifunctional T cell clones directed against HSV may recognize the same viral antigenic determinants and the same HLA antigens for both cytotoxic and virus-induced proliferative activities. This is the first demonstration of human HSV type specific and HSV type common T cell clones and HSV specific T cell clones with both cytotoxic and helper cell activities.     

Herpes Simplex Virus Type 2 Functions Expressed During Stimulation of Human Cell DNA Synthesis

Experiments were designed to identify herpes simplex virus type 2 (HSV-2)-specific functions expressed during stimulation of human embryo fibroblast DNA synthesis. Cultures were partially arrested in DNA synthesis by pretreatment with 5-fluorouracil and maintenance in low-serum (0.2%) medium during virus infection. Results showed that continuous [methyl-(3)H]thymidine uptake into cellular DNA was ninefold greater in HSV-2-infected than in mock-infected cultures measured after 24 h of incubation at 42 degrees C. Shifting mock-infected cultures from low- to high-serum (10%) medium also caused some stimulation, but [methyl-(3)H]thymidine uptake was only twofold greater than in cells maintained with low serum. Plating efficiencies of both HSV-2-infected and mock-infected cells at 42 degrees C were essentially the same and ranged from 37 to 76% between zero time and 72 h of incubation. De novo RNA and protein syntheses were continuously required for HSV-2 stimulation of cellular DNA synthesis. HSV-2 infection markedly enhanced transport, phosphorylation, and rate of incorporation of [methyl-(3)H]thymidine into cellular DNA, starting at 3 h and reaching a maximum by 12 h; after 12 h, these processes gradually declined to low levels. In mock-infected cells these processes remained at low levels throughout the observation period. Pretreatment of cells with interferon or addition of arabinofuranosylthymine at the time of virus infection inhibited stimulation caused by HSV-2. 5-Bromodeoxyuridine density-labeled experiments revealed that HSV-2 stimulates predominantly semiconservative DNA replication and some DNA repair. Stimulation of [methyl-(3)H]thymidine into cellular DNA correlated with detection of virus-specific thymidine kinase activity. In conclusion, HSV-2 stimulation of cellular DNA synthesis appeared to involve at least four virus-specific functions: induction of thymidine transport, HSV-2 thymidine kinase activity, semiconservative replication, and repair of cellular DNA.     

Herpes simplex virus (HSV)-specific proliferative and cytotoxic T-cell responses in humans immunized with an HSV type 2 glycoprotein subunit vaccine.

Studies were undertaken to determine whether immunization of humans with a herpes simplex virus type 2 (HSV-2) glycoprotein-subunit vaccine would result in the priming of both HSV-specific proliferating cells and cytotoxic T cells. Peripheral blood lymphocytes (PBL) from all eight vaccines studied responded by proliferating after stimulation with HSV-2, HSV-1, and glycoprotein gB-1. The PBL of five of these eight vaccines proliferated following stimulation with gD-2, whereas stimulation with gD-1 resulted in relatively low or no proliferative responses. T-cell clones were generated from HSV-2-stimulated PBL of three vaccinees who demonstrated strong proliferative responses to HSV-1 and HSV-2. Of 12 clones studied in lymphoproliferative assays, 9 were found to be cross-reactive for HSV-1 and HSV-2. Of the approximately 90 T-cell clones isolated, 14 demonstrated HSV-specific cytotoxic activity. Radioimmunoprecipitation-polyacrylamide gel electrophoresis analyses confirmed that the vaccinees had antibodies only to HSV glycoproteins, not to proteins which are absent in the subunit vaccine, indicating that these vaccinees had not become infected with HSV. Immunization of humans with an HSV-2 glycoprotein-subunit vaccine thus results in the priming of T cells that proliferate in response to stimulation with HSV and its glycoproteins and T cells that have cytotoxic activity against HSV-infected cells. Such HSV-specific memory T cells were detected as late as 2 years following the last boost with the subunit vaccine.     

The herpes simplex virus ICP0 RING finger domain inhibits IRF3- and IRF7-mediated activation of interferon-stimulated genes

Virus infection induces a rapid cellular response in cells characterized by the induction of interferon. While interferon itself does not induce an antiviral response, it activates a number of interferon-stimulated genes that collectively function to inhibit virus replication and spread. Previously, we and others reported that herpes simplex virus type 1 (HSV-1) induces an interferon -independent antiviral response in the absence of virus replication. Here, we report that the HSV-1 proteins ICP0 and vhs function in concert to disable the host antiviral response. In particular, we show that ICP0 blocks interferon regulatory factor IRF3- and IRF7-mediated activation of interferon-stimulated genes and that the RING finger domain of ICP0 is essential for this activity. Furthermore, we demonstrate that HSV-1 modifies the IRF3 pathway in a manner different from that of the small RNA viruses most commonly studied.     

Herpes simplex virus type 1 infection activates the Epstein-Barr virus replicative cycle via a CREB-dependent mechanism

The reactivation of latent Epstein-Barr virus (EBV) to lytic replication is important in pathogenesis and requires virus-host cellular interactions. However, the mechanism underlying the reactivation of EBV is not yet fully understood. In the present study, herpes simplex virus type 1 (HSV-1) was shown to induce the reactivation of latent EBV by triggering BZLF1 expression. The BZLF1 promoter (Zp) was not activated by HSV-1 essential glycoprotein-induced membrane fusion. Nevertheless, Zp was activated within 6 h post HSV-1 infection in virus entry-dependent and replication-independent manners. Using a panel of Zp deletion mutants, HSV-1 was shown to promote Zp through a cyclic adenosine monophosphate (cAMP) response element (CRE) located in ZII. The phosphorylated cAMP response element-binding (phos-CREB) protein, the cellular transactivator that binds to CRE, also increased after HSV-1 infection. By transient transfection, cAMP-dependent protein kinase A and HSV-1 US3 protein were found to be capable of activating Zp in CREB- and CRE-dependent manners. The relationship between EBV activation and HSV-1 infection revealed a possible common mechanism that stimulated latent EBV into lytic cycles in vivo.     

Effects of non toxic doses of acyclovir on nitric oxide and cellular death responses in herpesvirus types 1 and 2 infected hep-2 cells

Herpes simplex virus type-1 (HSV-1) and type-2 (HSV-2) are among the most "successful" pathogens and code for a variety of proteins to direct the apoptosis/necrosis responses of the cells they infect. Nitric oxide (NO) is an important intracellular signaling molecule in pathological processes. Acyclovir (ACV) is a chain terminator that targets the viral DNA polymerase as an antiviral agent. In this study, NO signals, and apoptosis/necrosis responses of HEp-2 cells were compared when infected by HSV-1 and -2 for 24 hours against non toxic doses (starting from 48.8, 24.4, 12.2, 6.1, 3 to 1.5 microg/mL) of ACV. In 48.8, 24.4 and 12.2 microg/mL of ACV, HSV-1 had an "upregulating effect" whereas HSV-2 had a "downregulating effect" on NO production, and in 6.1, 3 and 1.5 microg/mL of ACV HSV-1 had a "down-regulating effect" whereas HSV-2 had an "upregulating effect" on NO responses (HSV-1 had a "downregulating effect" on NO production whereas HSV-2 had an "upregulating effect" on NO production without any ACV). In 48.8, 24.4 and 12.2 microg/mL of ACV, HSV-1 had an "anti-apoptotic effect" whereas HSV-2 had a stimulation on "apoptotic effect", and in 6.1, 3 and 1.5 microg/mL of ACV HSV-1 had an "apoptotic effect" and HSV-2 turned to "its natural viral apoptotic effect level" (HSV-1 had an "natural viral apoptotic effect" whereas HSV-2 had a "natural viral apoptotic effect" on apoptosis response without any ACV). In 48.8, and 24.4 microg/mL of ACV, HSV-1 had significant "necrotic effect" on necrotic cellular death, "necrosis" increased in 12.2, 6.1, 3 and 1.5 microg/mL of ACV (HSV-1 had a negligible "necrotic effect" on HEp-2 cells alone), and HSV-2 had a "natural viral necrotic effect" alone; and also in all non toxic ACV concentrations. These results showed that HSV-1 and -2 had different "strategies" on apoptosis/necrosis and NO with and without non toxic ACV. These differences deserve further studies in order to explain the interactions between apoptotic/anti apoptotic, necrotic genes and NO, and ACV in HSV-1 and HSV-2 infections respectively.     

Herpes simplex virus-1 disarms the unfolded protein response in the early stages of infection

Accumulation of mis- and unfolded proteins during viral replication can cause stress in the endoplasmic reticulum (ER) and trigger the unfolded protein response (UPR). If unchecked, this process may induce cellular changes detrimental to viral replication. In the report, we investigated the impact of HSV-1 on the UPR during lytic replication. We found that HSV-1 effectively disarms the UPR in early stages of viral infection. Only ATF6 activation was detected during early infection, but with no upregulation of target chaperone proteins. Activity of the eIF2α/ATF4 signaling arm increased at the final stage of HSV-1 replication, which may indicate completion of virion assembly and egress, thus releasing suppression of the UPR. We also found that the promoter of viral ICP0 was responsive to ER stress, an apparent mimicry of cellular UPR genes. These results suggest that HSV-1 may use ICP0 as a sensor to modulate the cellular stress response.