单核苷酸多态性分析在近交系大鼠遗传检测中的应用

目的研究SNP在近交系大鼠遗传检测中的应用。方法 选取大鼠20号染色体MHC所在P12区上的9个SNP位点,应用新建立的高保真酶特异性检测SNP基因分型技术对五种常用近交系大鼠(BN、F344、WKY、LEW、SHR)和两种新培育近交系大鼠(MIJ和HFJ)进行SNP多态性分析。结果五种常用近交系的SNP检测结果与Rat Genome Database网站提供的基因型数据一致,并检测确立了新品系的SNP基因型。同时绘制出七种近交系大鼠在该9个SNP位点的遗传扩增图谱。结论运用所筛选的9个SNP位点进行大鼠多态性分析,能够快速、可靠地对BN、F344、WKY、LEW、SHR及MIJ、HFJ进行遗传监测。     

MIJ和HFJ近交系大鼠心电图表现

目的 测定近交系MIJ、HFJ大鼠心电图,并与Wistar大鼠比较分析,观察MIJ和HFJ大鼠心电图表现.方法 大鼠麻醉后,仰卧位固定于大鼠固定板上,用短针电极刺入皮下2～3 mm位置,麻醉5 min后,用福田青岛FX-102B心电图机做心电图,并对心电图进行分析.结果 三种大鼠均为窦性心律,心律齐整,雄性HFJ、MIJ心率均高于同性别Wistar.HFJ和MIJ品系、性别间心率差异均无显著性.HFJ和MIJ心电轴与Wistar相同,主要在0°～90°间.三种大鼠的P波方向及QRS波群基本相同,但各波振幅和各波时限,在不同品系和性别之间存在较明显的差异.结论 近交系MIJ和HFJ大鼠各有其独特的心电图表现.     

PCR扩增近交系大鼠微卫星位点DNA多态性的研究

本实验选取大鼠7条染色体上的微卫星位点合成了10对引物,利用聚合酶链反应（PCR）扩增技术对国内北京和哈尔滨等4家单位提供伯6个品系（SHR、SHRSP、LEW、RCS、WKY和F344）的8个近交系大鼠群体进行了DNA多态性分析的研究。结果表明：9个微卫星位点具有显多态性;不同品系个体之间具有多态性;同一群体不同个体之间除SHR（哈）的SMST位点和WKY（哈）的AGT位点出现一定的差异,其他均没有差异;不同地区同一品系的不同个体之间也存在一定的差异。该方法能有效地对近交系与杂交系、品系与品系、品系与亚系加以区分。因此,本实验为开展近交系大鼠遗传作图、基因定位和为实验动物的遗传背景监测提供可靠的信息,为大鼠遗传基因的研究提供了一个快速简例、特异准确的方法。     

近交系MIJ和HFJ大鼠生化标记基因的测定

目的 观察MIJ和HFJ大鼠的基因纯合度和遗传稳定性.方法 MIJ大鼠7只,取自F22代基础群中3对种鼠和F22代雄性生殖缺陷鼠1只.HFJ大鼠6只,取自HFJ大鼠F25代基础群中的3对种鼠.按照中华人民共和国国家标准GB/T14927.1-2001实验动物近交系小鼠、大鼠生化标记检测方法测定.结果　MIJ和HFJ近交...     

近交系MIJ和HFJ大鼠部分生理数据测定和分析

目的测定近交系大鼠MIJ、HFJ和封闭群Wistar大鼠的脏器系数、体温、呼吸频率、肠管长度,观察两个近交系大鼠的生理表型。方法 采用常规方法对大鼠脏器系数、体温、呼吸频率及肠管长度进行测定,并对HFJ、MIJ、Wistar大鼠三者间进行比较。结果①体重:HFJ、MIJ、Wistar大鼠同性别间比较差异无显著性。②脏器系数:HFJ与Wistar大鼠雄性间心脏、肺,雌性间子宫、肝;MIJ与Wistar大鼠雄性间肺、脾,雌性间脑、脾,差异均有显著性。HFJ与MIJ大鼠雄性间脑,雌性间脑和脾差异有显著性。HFJ大鼠不同性别间肝、脑、眼球差异有显著性。MIJ大鼠不同性别间,脑、心脏、肾、肺、脾和眼球差异均有显著性。③体温:HFJ雌性大鼠明显高于Wistar雌性,雄性间差异无显著性。HFJ大鼠雌性高于雄性,差异有显著性。④呼吸频率:HFJ雌性大鼠低于同性Wistar大鼠,MIJ大鼠雌性和雄性均高于同性别Wistar大鼠,差异有显著性。⑤肠管长度:HFJ与Wistar同性别间比较,肠管总长和小肠差异有显著性。MIJ与Wistar大鼠雄性间肠管总长、大肠、小肠、盲肠差异均有显著性,雌性间肠管总长、小肠、盲肠差异有显著性。HFJ与MIJ大鼠同性别间差异均无显著性,不同性别的HFJ和MIJ的肠管总长、大肠和小肠差异有显著性。结论 MIJ和HFJ近交系大鼠的脏器系数、体温、呼吸频率、肠管长度都各有其独特的生理概貌。     

辽宁省6种常用近交系小鼠10个微卫星位点的遗传质量检测报告

目的利用微卫星技术对辽宁省6种近交系小鼠进行遗传质量分析。方法根据Mouse Genome Database和相关文献选取10个多态信息丰富的位点和引物,进行PCR扩增和PAGE电泳,对小鼠的遗传多态性进行研究。结果不同品系小鼠同一位点的扩增结果表现出多态性,同一品系同一位点表现单态性,所有小鼠的10个位点都处于纯合状态;遗传距离分析表明,C57BL/10与C57BL/6J小鼠之间的遗传距离最近,为0.1021,遗传距离最远的是BALB/c与C57BL/10、C57BL/6J,分别为0.1635和0.1614。结论运用所筛选的10个微卫星位点可以对近交系小鼠进行遗传质量检测,说明该方法具备可行性。     

PCR扩增近交系大鼠微卫星位点DNA多态性的研究

本实验选取大鼠7条染色体上的微卫星位点合成了10对引物,利用聚合酶链反应(PCR)扩增技术对国内北京和哈尔滨等4家单位提供的6个品系(SHR、SHRSP、LEW、RCS、WKY和F344)的8个近交系大鼠群体进行了DNA多态性分析的研究.结果表明:9个微卫星位点具有显著多态性;不同品系个体之间具有多态性;同一群体不同个体之间除SHR(哈)的SMST位点和WKY(哈)的AGT位点出现一定的差异外,其他均没有差异;不同地区同一品系的不同个体之间也存在一定的差异.该方法能有效地对近交系与杂交系、品系与品系、品系与亚系加以区分.因此,本实验为开展近交系大鼠遗传作图、基因定位和为实验动物的遗传背景监测提供可靠的信息,为大鼠遗传基因的研究提供了一个快捷简便、特异准确的方法。 Abstract:In the experiment,It were selected that 20 primers were assigned on 7 chromosomes of inbred rat.DNA polymorphism of 8 colonies from 6 inbred rat strains(SHR、SHRSP、WKY、LEW、RCS、F344)were studied in national Beijing and Harbin using PCR-analyzed microsatellites.The results indicated that there were remarkable polymorphism in 9 microsatellite loci;There is a polymorphism among the various rat strains;and no polymorphism in the same rat strains except SMST locus of SHR(Harbin)and AGT locus of WKY(Harbin)and there is a little difference among the same inbred rat strains in different areas.The method of PCR-analyzed microsatellites can be used for distinguishing between inbred and outbred、different strains、strain and substrain.and it provides a lot of information for genetic mapping,gene location and heredity probe of the inbred rat strains,and a speedy、convenient method for genetic research of the inbred rat.     

使用林鹳微卫星引物对东方白鹳基因组DNA进行交叉扩增

利用林鹳11个微卫星位点的引物对东方白鹳进行交叉扩增。经过PCR体系的优化,在11个位点中有6个得到清晰的扩增条带,其余5位点得不到确切的扩增产物。对上述6个位点的扩增产物进行克隆测序分析,发现其中4个位点上的扩增产物含有微卫星重复序列,而另外两个位点中无重复单元。通过基因分型对上述4个微卫星位点进行多态性分析后发现其中的WSμ13,WSμ17位点分别为高度多态和中度多态位点,而另外两个位点则无多态性。同时还对影响交叉扩增结果成功率及微卫星位点多态性的因素进行了分析和总结。     

微卫星DNA监控大鼠近交系的培育

采用微卫星DNA技术来监控大鼠仔代基因状况,选择性地进行交配繁殖,使基因快速纯合,缩短培育新的近交系动物周期。利用PCR扩增30个微卫星DNA位点对封闭群SD和Wistar大鼠交配繁殖的仔代鼠进行微卫星DNA多态性分析,仔代中与母代SD大鼠相似系数高的与中的进行定向交配繁殖。F2代大鼠均为杂合多态的位点,没有纯合位点;到F9代时基因纯合位点达27个,纯合基因位点率为90%。每代相似系数具有不断上升的趋势,上升率为6-20%。采用皮肤移植方法验证了F9代大鼠间无排斥。建立了一种新的快速培育近交系动物的方法。     

大鼠及小鼠微卫星引物在社鼠中的跨种扩增

利用微卫星引物在同一属、科、目不同种之间具有通用性的特点,通过PCR扩增、聚丙烯凝胶电泳和银染技术对社鼠(Niviventer confucianus)近缘物种大鼠(Rattus norvegicus)、小鼠(Mus musculus)中已知的70个微卫星位点引物进行跨种扩增,筛选适合社鼠相关研究的多态微卫星引物.结果发现,40个位点引物出现扩增条带,21个位点引物能够稳定扩增,其中15个位点杂合,13个位点具有多态性;PCR扩增的Mg2+浓度主要集中在1.5及2.0 mmol/L,退火温度在50～60℃之间不等.虽然部分扩增产物有影子带的存在,但并不影响等位基因的判读.总体来看,利用大、小鼠的微卫星引物扩增社鼠的微卫星位点是可行的.     

近交系HFJ大鼠的培育及其部分表型观察

目的培育高繁殖力近交系HFJ大鼠并观察其部分表型特征。方法以一对Wistar大鼠为基代,通过全同胞近亲交配方式,采用选优法培育高繁殖力近交系HFJ大鼠。采用生化标记法、皮肤移植实验进行遗传质量检测;观察比较其部分表型特征。结果HFJ种群符合近交系标准;其窝产仔数、离乳率、胎次间隔显著高于Wistar大鼠;HFJ大鼠12周龄后生长缓慢,体重低于同龄Wistar大鼠;HFJ大鼠部分血液常规指标及血液生化指标与Wistar大鼠有显著差异。结论HFJ大鼠繁殖力强,是具有独特生物学特性的近交系大鼠。     

Analysis of microsatellite polymorphism in inbred knockout mice

Previously, we found that the genotype of 42 out of 198 mouse microsatellite loci, which are distributed among all chromosomes except the Y chromosome, changed from monomorphism to polymorphism (CMP) in a genetically modified inbred mouse strain. In this study, we further examined whether CMP also relates to the homologous recombination in gene knockout (KO) mouse strains. The same 42 microsatellite loci were analyzed by polymerase chain reaction (PCR) in 29 KO inbred mouse strains via short tandem sequence repeat (STR) scanning and direct sequence cloning to justify microsatellite polymorphisms. The C57BL/6J and 129 mouse strains, from which these 29 KO mice were derived, were chosen as the background controls. The results indicated that 10 out of 42 (23.8%) loci showed CMP in some of these mouse strains. Except for the trinucleotide repeat locus of D3Mit22, which had microsatellite CMP in strain number 9, the core sequences of the remaining 41 loci were dinucleotide repeats, and 9 out of 41 (21.95%) showed CMPs among detected mouse strains. However, 11 out of 29 (37.9%) KO mice strains were recognized as having CMPs. The popular dinucleotide motifs in CMP were (TG)(n) (50%, 2/4), followed by (GT)(n) (27.27%, 3/11) and (CA)(n) (23.08%, 3/13). The microsatellite CMP in (CT)(n) and (AG)(n) repeats were 20% (1/5). According to cloning sequencing results, 6 KO mouse strains showed insertions of nucleotides whereas 1 showed a deletion. Furthermore, 2 loci (D13Mit3 and D14Mit102) revealed CMP in 2 strains, and mouse strain number 9 showed CMPs in two loci (D3Mit22 and D13Mit3) simultaneously. Collectively, these results indicated that microsatellite polymorphisms were present in the examined inbred KO mice.     

Slc:Wistar outbred rats show close genetic similarity with F344 inbred rats

Although Slc:Wistar rats are used widely in biomedical research as outbred rats, close similarities in growth curves, survival rates, and immunological and biochemical phenotypes have been reported between Slc:Wistar and F344 inbred rats. We reported previously that nine genetic variations that were fixed in Slc:Wistar rats had identical genotypes in F344 rats. Here, we examined the genetic characteristics of Slc:Wistar rats using 27 simple-sequence length polymorphism (SSLP) markers and compared them with other Wistar stocks available in Japan and with some F344 strains. Among 27 SSLP loci, 23 (85%) were fixed in the Slc:Wistar rats, which was the highest among the other Wistar stocks. The 23 fixed loci shared identical genotypes with corresponding loci in F344 rats. Further, the predominant allele types in the unfixed loci had allele frequencies as high as 80%, and these alleles were identical in the F344 rats. When the nine genetic variations reported previously are added, a total of 32 (89%) out of the 36 loci examined were fixed and identical in the Slc:Wistar and F344 rat genomes. These findings indicate the low genetic variation in Slc:Wistar rats and the high genetic similarity between the Slc:Wistar and F344 inbred rats. This study demonstrates the importance of characterizing outbred rats and the need to pay ample attention to the genetic characteristics the Slc:Wistar rats for their proper use.     

雄性不育大鼠近交系MIJ的建立及其遗传特征观察

以发现的雄性不育大鼠的正常表型同胞鼠为种鼠,通过全同胞近亲交配方式,采用选优法成功培育出自发雄性不育大鼠近交系MIJ.同系异体皮肤移植验证其遗传纯合度,观察其表型特征,并通过遗传测交试验测定雄性不育性状的遗传方式.结果表明.MIJ种群符合近交系标准;雄性不育大鼠呈睾丸下降延迟、睾丸及附睾发育迟缓、精子数量少及精子生成障碍;近交系内其他个体表型正常.不育性状呈隐性遗传方式,由常染色体上单一隐性基因控制.该雄性不育大鼠可作为人类男性不育研究的动物模型.