天蚕素A-马盖宁杂合肽对耐甲氧西林金黄色葡萄球菌抑菌机制的研究

【目的】研究天蚕素A-马盖宁杂合肽对耐甲氧西林金黄色葡萄球菌(MRSA)DNA作用的抑菌机制。【方法】利用激光扫描共聚焦显微镜(CLSM)、凝胶阻滞分析、紫外光谱分析、荧光光谱分析的方法。【结果】天蚕素A-马盖宁杂合肽对MRSA的最小抑菌浓度(MIC)为64 mg/L,杂合肽可以在细菌胞内形成累积,并能与体外基因组DNA发生结合作用。同时杂合肽可以引起DNA构象的改变,荧光光谱分析结果表明杂合肽能与溴化乙锭(EB)竞争性地嵌入基因组DNA中,作用方式类似于EB与DNA的结合方式,杂合肽与DNA的结合表现为混合式作用方式。【结论】天蚕素A-马盖宁进入细菌胞内,与MRSA基因组DNA结合,并以混合式作用方式与DNA发生了结合,通过胞内靶向机制发挥抑菌作用。     

抗菌肽BuforinⅡ衍生物与大肠杆菌基因组DNA的作用机制

【目的】研究抗菌肽BuforinⅡ的衍生物BF2-A/B与大肠杆菌基因组DNA的作用机制。【方法】琼脂糖电泳检测肽对DNA的断裂作用,凝胶阻滞实验研究肽与DNA的结合作用,圆二色谱考察结合肽后DNA结构的变化,荧光光谱分析肽与溴化乙锭竞争性嵌入DNA以及磷酸根对肽与DNA相互作用的影响。【结果】BF2-A/B不断裂基因组DNA而是结合DNA,使DNA双螺旋结构变得松散,削弱碱基对间的堆积作用,并取代EB,使EB-DNA复合体系荧光减弱。而PO43-的加入减弱了肽对DNA-EB荧光的淬灭作用。【结论】衍生肽与DNA的结合方式是先靠静电引力吸附到DNA磷酸基团上,随即插入双螺旋沟槽,嵌入碱基对间。BF2-B有更多的正电荷,更强的插入沟槽和嵌入碱基对的能力,使得其结合DNA的能力比BF2-A强。     

鲎素I对普通变形杆菌的作用研究

旨在研究鲎素Ⅰ对普通变形杆菌的抑杀作用机制。利用鲎素Ⅰ对普通变形杆菌的抑杀浓度、壁膜通透性和电荷性、分泌蛋白酶活力的影响及其在培养基中的稳定性进行研究。结果显示,鲎素Ⅰ对普通变形杆菌的MIC和MBC值分别为40-80和80μg/mL,它也能增加普通变形杆菌的壁膜通透性及其所带的正电荷。在鲎素Ⅰ浓度≤40μg/mL时,普通变形杆菌分泌的蛋白酶活力有所增加,而≥60μg/mL时,则呈下降趋势。在普通变形杆菌培养环境中的鲎素Ⅰ含量会降低。结果证明,鲎素Ⅰ能对普通变形杆菌产生抑杀作用,其抑菌机制与破坏细菌壁膜的通透性有关。     

抗菌肽P7抑制大肠杆菌的非膜作用机制北大核心CSCD

【目的】研究抗菌肽P7抑制大肠杆菌的非膜作用机制。【方法】P7与溴化乙锭竞争结合大肠杆菌基因组DNA的荧光光谱,分析P7与DNA的结合方式;流式细胞术分析P7与大肠杆菌基因组DNA结合对细菌细胞周期的影响;采用磁珠富集和PCR扩增相结合的方法分析P7特异结合的DNA序列;通过实时荧光定量PCR分析P7对大肠杆菌DNA复制和SOS损伤修复基因表达的影响;核酸染料的荧光分析研究P7对大肠杆菌DNA和RNA合成的影响。【结果】P7以嵌插的方式作用于大肠杆菌基因组DNA碱基对并形成肽-DNA复合物,使溴化乙锭-DNA复合体系的荧光强度减弱。P7可以显著增加大肠杆菌细胞周期中S期细胞数目,抑制大肠杆菌DNA复制。P7特异性结合rnh A使该基因表达水平显著下调2.24倍。同时,在肽的影响下参与大肠杆菌DNA复制相关的ssb、dna G、lig B和rnh A基因的表达水平显著下调(P<0.05),DNA损伤修复的rec A和rec N基因显著上调(P<0.05)。P7可降低大肠杆菌DNA和RNA的合成。【结论】P7特异性地结合rnh A序列引起大肠杆菌DNA的损伤并抑制大肠杆菌的DNA复制。在P7的影响下,参与大肠杆菌DNA复制相关的基因的表达水平下调,DNA损伤修复基因显著上调,同时抑制大肠杆菌DNA和RNA的合成。     

紫草素对白色念珠菌的抑制作用机制

【目的】研究紫草素抑制白色念珠菌的作用机制。【方法】通过微量稀释法测定紫草素对白色念珠菌的最低抑菌浓度(MIC)和最低杀菌浓度(MFC);紫外分光光度法测定紫草素对白色念珠菌细胞膜渗透性的影响;扫描电镜观察紫草素对菌体形态的影响;激光共聚焦显微镜测定紫草素对白色念珠菌细胞内钙离子浓度的影响;卵黄平板培养基法检测紫草素对白色念珠菌的细胞膜磷脂酶活性的影响;RT-PCR检测紫草素对白色念珠菌PLB1和PLB2基因表达量的影响。【结果】紫草素对白色念珠菌有较强的抑制作用,其对白色念珠菌的MIC和MFC分别为16μg/m L和32μg/mL。紫草素能破坏白色念珠菌细胞膜的完整性,使细胞膜的通透性增加,导致细胞内DNA和RNA等大分子物质的泄漏和细胞内钙离子的流失。其中MIC的紫草素作用菌体16 h后,上清液中的DNA和RNA等大分子含量与对照组相比增加了117.32%(P0.01);细胞内的[Ca~(2+)]降低了72.02%(P0.01)。扫描电镜结果也证明了紫草素对白色念珠菌细胞膜的破坏作用。紫草素也能抑制白色念珠菌分泌磷脂酶,且呈浓度剂量依赖。其中,与对照组相比,MIC的紫草素能使白色念珠菌分泌磷脂酶的量下降56.3%(P0.01)。RT-PCR结果显示,紫草素能抑制编码磷脂酶B的基因PLB1和PLB2的表达量,其中1/2 MIC的紫草素作用白色念珠菌16 h后,与对照组相比,PLB1和PLB2基因的相对表达量分别降低了56.4%和61.4%(P0.01)。【结论】紫草素对白色念珠菌有较强的抑杀作用,其作用机制是通过破坏白色念珠菌细胞膜的完整性,增加菌体细胞膜的通透性,导致细胞内DNA和RNA等大分子的泄漏和细胞内[Ca~(2+)]的流失,最终引起菌体的死亡。而紫草素对白色念珠菌磷脂酶分泌的抑制作用,致使其不能及时维护和修复由紫草素造成的细胞膜的破坏和损伤,也是导致菌体死亡的原因。     

鲎素的抗菌靶点初探

采用体外抑菌法测定鲎素的抑菌动力学特点,钼酸铵比色法和紫外吸收法分别检测细菌与鲎素共同孵育前后无机磷和大分子泄漏情况,扫描电镜和透射电镜观察细菌与鲎素共同孵育前后细菌形态和结构的变化,紫外吸收法和凝胶电泳法分别观察鲎素对细菌基因组DNA和质粒DNA结构的影响,质粒转化实验检测鲎素对质粒DNA复制和转录功能的影响.结果表明,鲎素对革兰氏阳性菌和阴性菌具有不同的抑菌动力学特点,经鲎素处理的细菌,胞内无机磷和大分子泄漏显著,细胞壁膜和菌体遭到不同程度的破坏,鲎素可与细菌基因组DNA和质粒DNA结合,高浓度鲎素有可能使DNA发生断裂,进而使质粒DNA复制和转录功能受到抑制.上述结果提示,鲎素的抗菌靶点至少包括细胞壁膜和菌体DNA.     

乳酸乳球菌表达重组牛乳铁蛋白肽的抑菌活性分析

牛乳铁蛋白肽是由牛乳铁蛋白经消化酶水解产生的一类具有广谱抑菌活性的短肽;乳酸乳球菌作为食品级微生物,既有天然的益生作用,又是理想的表达牛乳铁蛋白肽的载体。【目的】探究重组乳酸乳球菌pAMJ399-LFcinBA/MG1363表达牛乳铁蛋白肽的抑菌活性。【方法】利用牛乳铁蛋白肽标准品绘制定量标准曲线来确定重组牛乳铁蛋白肽的含量,利用牛津杯法及微量肉汤稀释法测定重组牛乳铁蛋白肽对大肠杆菌、金黄色葡萄球菌等35株细菌的抑菌活性及最小抑菌浓度,利用扫描电镜、透射电镜、荧光显微镜、凝胶阻滞试验、黏附试验来探究重组牛乳铁蛋白肽对菌体结构、细菌DNA及黏附力的影响,利用CCK-8检测其对RAW 264.7细胞的毒性作用,并对小鼠红细胞溶血率进行测定。【结果】重组乳酸乳球菌上清中牛乳铁蛋白肽的浓度为24.39μg/mL,重组牛乳铁蛋白肽对测试的25株致病菌均有不同程度的抑制作用,抑菌浓度范围在16–128μg/mL,但对9株乳酸菌以及粪肠球菌没有明显的抑制作用,对大肠杆菌、金黄色葡萄球菌、多杀性巴氏杆菌、鸡白痢沙门菌的菌体完整性具有不同程度的破坏作用,其主要作用靶点为细菌的细胞膜,可以与细菌DNA结合并抑制细菌对Caco-2、IPEC细胞的黏附作用,重组牛乳铁蛋白肽对小鼠红细胞及RAW 264.7细胞没有明显的细胞毒性。【结论】乳酸乳球菌表达重组牛乳铁蛋白肽的抑菌活性与牛乳铁蛋白肽标准品相一致,通过直接作用于细菌细胞膜、胞内核酸或抑制细菌对正常细胞的黏附作用等多方面实现抑制或杀死细菌,发挥广谱的抗菌活性,且对真核细胞没有明显的细胞毒性作用。     

Plantaricin 163对热杀索丝菌的抗菌活性及其作用机制

【背景】热杀索丝菌(Brochothrix thermosphacta)为鲫鱼在4°C贮藏过程中的主要腐败菌,Plantaricin 163是由植物乳杆菌产生的一种新型广谱细菌素,能明显延长鲫鱼的贮藏期。【目的】研究Plantaricin163对热杀索丝菌的抗菌活性和作用机制。【方法】通过测定最小抑菌浓度(Minimuminhibitoryconcentration)和杀菌动力学了解Plantaricin163对热杀索丝菌的抗菌效果,并从电导率的变化、核酸和蛋白的泄露、流式细胞实验、扫描电镜和透射电镜观察等4个方面探讨Plantaricin 163对热杀索丝菌的作用机制。【结果】Plantaricin 163对热杀索丝菌的的最小抑菌浓度为32μg/mL,优于Nisin的作用效果,作用方式为杀菌模式,6 h内能完全杀死热杀索丝菌。Plantaricin163能够通过增加热杀索丝菌细胞膜的通透性,增加胞外电导率,进而破坏细胞膜完整性,导致内容物泄漏,并影响细胞的外部形态和内部结构,从而导致菌体细胞瓦解死亡。【结论】Plantaricin 163可以破坏热杀索丝菌的细胞膜和内部结构,发挥抗菌活性。     

羊栖菜多糖诱导HL-60细胞凋亡的研究

用MTT法观察羊栖菜多糖(SFPS)在体外抗人白血病HL-60细胞增殖作用;扫描电镜、透射电镜、DNA电泳和流式细胞仪检测HL-60细胞凋亡。结果表明SFPS对HL-60细胞具有显著生长抑制作用,并呈量效和时效关系,药物作用24,36,48,72h的IC_(50)分别为390,362,402,421mg/L;药物浓度为300mg/L和500mg/L作用HL-60细胞后,琼脂糖凝胶电泳显示有凋亡细胞特有的DNA梯状条带,细胞微绒毛减少、染色质固缩、过集,凋亡小体形成;DNA直方图出现亚G_1峰。在一定浓度范围内,SFPS诱导细胞凋亡的作用呈现浓度和时间依赖性,同时G_2/M期细胞比例增多。因此,SFPS抗肿瘤作用与诱导细胞凋亡和G_2/M期细胞阻滞有关。     

革兰氏阳性细菌基因组DNA提取方法的比较及优化

【目的】基因组DNA提取效率和质量对分子生物学相关研究起着关键的作用,革兰氏阳性细菌由于细胞壁较厚、难破裂使其基因组DNA提取的难度增大,本文旨在寻找一种高效稳定的DNA提取方法。【方法】以Clostridium thermocellum和Thermoanaerobacterium thermosaccharolyticum为实验菌株,使用6种DNA提取方法对C. thermocellum基因组DNA进行提取,对比其提取效果和产率。【结果】改良的SDS-碱裂解法提取得到的DNA浓度较高(400 mg/l左右),且平行样间浓度和纯度稳定。【结论】为革兰氏阳性细菌基因组DNA提取提供参考。     

Preparation of chromosome spreads for electron (TEM,SEM, STEM), light and confocal microscopy

In the past, ultrastructural studies on chromosome morphology have been carried out using light microscopy, scanning electron microscopy and transmission electron microscopy of whole mounted or sectioned samples. Until now, however, it has not been possible to use all of these techniques on the same specimen. In this paper we describe a specimen preparation method that allows one to study the same chromosomes by transmission, scanning-transmission and scanning electron microscopy, as well as by standard light microscopy and confocal microscopy. Chromosome plates are obtained on a carbon coated glass slide. The carbon film carrying the chromosomes is then transferred to electron microscopy grids, subjected to various treatments and observed. The results show a consistent morphological correspondence between the different methods. This method could be very useful and important because it makes possible a direct comparison between the various techniques used in chromosome studies such as banding, in situ hybridization, fluorescent probe localization, ultrastructural analysis, and colloidal gold cytochemical reactionsAbbreviations CLSM confocal laser scanning microscope - EM electron microscopy - kV kilovolt(s) - LM light microscope - SEM scanning electron microscope - STEM scanning-transmission electron microscope - TEM transmission electron microscope     

CP7抗菌蛋白对嗜水气单胞菌的抑杀作用机理

[目的]研究多粘类芽孢杆菌(Paenibacillus polymyxa) CP7菌株的抗菌蛋白(CP7ACP)对嗜水气单胞菌的抑杀作用机理,为防治嗜水气单胞菌引起的鱼病提供新的潜在天然药物.[方法]采用抑菌试验、钼锑抗比色法和紫外光谱法研究其对嗜水气单胞菌S12菌株生长、磷泄漏和生物大分子的影响,并利用扫描电镜和透射电镜观察了嗜水气单胞菌细胞结构遭受的破坏作用.[结果]CP7ACP对嗜水气单胞菌的抑菌圈直径约8.1 mm,最小抑菌浓度(MIC)与最小杀菌浓度(MBC)分别为原液浓度的1/8和1/4;嗜水气单胞菌受CP7ACP处理后,电镜观察发现其细胞壁、细胞膜、细胞器以及菌体均受到不同程度的破坏,胞内的生物大分子和磷泄漏明显,基因组DNA发生增色效应.[结论]CP7ACP抑制嗜水气单胞菌生长,可用于防治嗜水气单胞菌引起的鱼病.     

Combination of fluorescent in situ hybridization and microautoradiography-a new tool for structure-function analyses in microbial ecology

A new microscopic method for simultaneously determining in situ the identities, activities, and specific substrate uptake profiles of individual bacterial cells within complex microbial communities was developed by combining fluorescent in situ hybridization (FISH) performed with rRNA-targeted oligonucleotide probes and microautoradiography. This method was evaluated by using defined artificial mixtures of Escherichia coli and Herpetosiphon aurantiacus under aerobic incubation conditions with added [3H]glucose. Subsequently, we were able to demonstrate the potential of this method by visualizing the uptake of organic and inorganic radiolabeled substrates ([14C]acetate, [14C]butyrate, [14C]bicarbonate, and 33Pi) in probe-defined populations from complex activated sludge microbial communities by using aerobic incubation conditions and anaerobic incubation conditions (with and without nitrate). For both defined cell mixtures and activated sludge, the method proved to be useful for simultaneous identification and analysis of the uptake of labeled substrates under the different experimental conditions used. Optimal results were obtained when fluorescently labeled oligonucleotides were applied prior to the microautoradiographic developing procedure. For single-cell resolution of FISH and microautoradiographic signals within activated sludge flocs, cryosectioned sample material was examined with a confocal laser scanning microscope. The combination of in situ rRNA hybridization techniques, cryosectioning, microautoradiography, and confocal laser scanning microscopy provides a unique opportunity for obtaining cultivation-independent insights into the structure and function of bacterial communities.     

Confocal scanning light microscopy of the Escherichia coli nucleoid: comparison with phase-contrast and electron microscope images.

The nucleoid of living and OsO4- or glutaraldehyde-fixed cells of Escherichia coli strains was studied with a phase-contrast microscope, a confocal scanning light microscope, and an electron microscope. The trustworthiness of the images obtained with the confocal scanning light microscope was investigated by comparison with phase-contrast micrographs and reconstructions based on serially sectioned material of DNA-containing and DNA-less cells. This comparison showed higher resolution of the confocal scanning light microscope as compared with the phase-contrast microscope, and agreement with results obtained with the electron microscope. The effects of fixation on the structure of the nucleoid were studied in E. coli B/r H266. Confocal scanning light micrographs and electron microscopic reconstructions showed that the shape of the nucleoid remained similar after OsO4 or glutaraldehyde fixation; however, the OsO4 nucleoid appeared to be somewhat smaller and more centralized within the cell.     

The human Rad52 protein exists as a heptameric ring

The RAD52 epistasis group was identified in yeast as a group of genes required to repair DNA damaged by ionizing radiation [1]. Genetic evidence indicates that Rad52 functions in Rad51-dependent and Rad51-independent recombination pathways [2] [3] [4]. Consistent with this, purified yeast and human Rad52 proteins have been shown to promote single-strand DNA annealing [5] [6] [7] and to stimulate Rad51-mediated homologous pairing [8] [9] [10] [11]. Electron microscopic examinations of the yeast [12] and human [13] Rad52 proteins have revealed their assembly into ring-like structures in vitro. Using both conventional transmission electron microscopy and scanning transmission electron microscopy (STEM), we found that the human Rad52 protein forms heptameric rings. A three-dimensional (3D) reconstruction revealed that the heptamer has a large central channel. Like the hexameric helicases such as Escherichia coli DnaB [14] [15], bacteriophage T7 gp4b [16] [17], simian virus 40 (SV40) large T antigen [18] and papilloma virus E1 [19], the Rad52 rings show a distinctly chiral arrangement of subunits. Thus, the structures formed by the hexameric helicases may be a more general property of other proteins involved in DNA metabolism, including those, such as Rad52, that do not bind and hydrolyze ATP.     

Transmission of Escherichia coli O157:H7 from contaminated manure and irrigation water to lettuce plant tissue and its subsequent internalization.

The transmission of Escherichia coli O157:H7 from manure-contaminated soil and irrigation water to lettuce plants was demonstrated using laser scanning confocal microscopy, epifluorescence microscopy, and recovery of viable cells from the inner tissues of plants. E. coli O157:H7 migrated to internal locations in plant tissue and was thus protected from the action of sanitizing agents by virtue of its inaccessibility. Experiments demonstrate that E. coli O157:H7 can enter the lettuce plant through the root system and migrate throughout the edible portion of the plant.     

A visualization method of filamentous phage infection and phage-derived proteins in Escherichia coli using biotinylated phages.

Direct visualization of filamentous phage infection in Escherichia coli (E. coli) was attempted using biotinylated phages (BIO-phages). The biotinylation of the phages did not influence their infectivity into E. coli. E. coli infected with BIO-phages could be detected by using fluorescein-conjugated avidin with confocal laser scanning microscopy, and BIO-phages and BIO-phage-derived proteins in E. coli could be directly observed by using the avidin-biotin-peroxidase complex method with electron microscopy. This is the first report of direct visualization of phage infection and phage-derived proteins in the host cell using a biotin-avidin interaction. This simple and powerful method is applicable to the study of infection by various viruses.     

Involvement of apoptosis in malathion-induced cytotoxicity in a grass carp (Ctenopharyngodon idellus) cell line

We investigated the role of apoptosis in malathion-induced cytotoxicity in the grass carp (Ctenopharyngodon idellus) cell line ZC-7901. Fish cells were treated with different concentrations of malathion (0.62-95 mg/L), and the IC(50) ranged from 37.94+/-1.93 mg/L for 12 h to 3.04+/-0.27 mg/L for 72 h by the MTT assay. Apoptosis was detected by confocal laser scanning microscopy, transmission electron microscopy, TUNEL reaction, DNA laddering and a flow cytometric PI staining assay. The results demonstrated that apoptosis was involved in the cytotoxic effect of malathion, and that malathion-induced apoptosis occurred in a dose- and time-dependent manner. In addition, the induction of apoptosis by malathion was accompanied by mitochondrial membrane potential (DeltaPsi(m)) disruption, intracellular Ca(2+) elevation, generation of reactive oxygen species (ROS) and ATP depletion. Our investigation suggested that malathion exerts its cytotoxic effects by the induction of apoptosis via a direct effect on the mitochondria.     

Preliminary Study on High-level Expression of Tandem-Arranged Tachyplesin-Encoding Gene in Bacillus subtilis Wb800 and its Antibacterial Activity

To produce tachyplesin, an antimicrobial peptide, by a stable and efficient gene engineering approach, cDNAs containing single tachyplesin gene sequence (tac)¹ and tandem repeat of tachyplesin gene sequence (tac2) were respectively developed by annealing two synthesized complementary single-stranded DNAs and constructed into pSBPTQ shuttle vector under the control of the SacB.p.s promoter. The vectors containing the target gene sequence were then transformed into Bacillus subtilis WB800, respectively. Both expression of tac and tac2 were induced by 2% sucrose. The fermentation supernatant was purified by regenerated cellulose membrane tubing (MWCO 2000) and the secreted TAC² and TAC2 were about 5 and 10 mg/l of supernatant, respectively. The antimicrobial activities of TAC and TAC2 were measured by the size of bacteriostatic circle of the fermentation supernatants against Escherichia coli K88. Ultrastructural alteration of E. coli K88 and Salmonella typhimurium was observed under scanning electron microscope and transmission electron microscopy. The results showed that in comparison with TAC, TAC2 was expressed at a higher level and also indicating strong antimicrobial activity both in vitro and in vivo. ¹ tac is tachyplesin gene; tac2 is a tandem repeat tachyplesin gene.²TAC is the expression product of tac; TAC2 is the expression product of tac2.     

Three-dimensional structure of living chloroplasts as visualized by confocal scanning laser microscopy

Summary The newly developed confocal scanning laser microscope, together with image processing by computer, has been used to obtain three-dimensional information on the organization of grana in chloroplasts in living plant tissue. Chloroplasts are ideally suited for such studies because their pigments show bright autofluorescence. The high-resolution stereo images bridge a gap between classic light microscopy and electron microscopy. Our preliminary observations on several plant species resemble most the early observations of Strugger (1951: Die Strukturordnung im Chloroplasten. Ber Deutsch Bot Ges 64: 69–83) and suggest that the 3-D technique might well be suitable to solve discrepancies in the interpretation of classical light microscopic and electron microscopic observations.Abbreviations 3-D three dimensional - CSLM confocal scanning laser microscopy - DCMU 3-(3,4-dichlorophenyl)-1,1-dimethyl urea - DNA deoxyribonucleic acid