塔里木盆地胀果甘草内生放线菌多样性及抗菌活性分析

【目的】发掘具有开发前景的放线菌资源,对分离自新疆胀果甘草的内生放线菌的多样性、抗菌活性和次级代谢产物合成相关基因进行研究。【方法】采用5种培养基和3种前处理方法,从胀果甘草中分离获得80株放线菌。基于菌株形态学特征,对36株代表菌株进行抗菌活性检测,通过特异性引物扩增方法,检测了PKS I、PKS II、NPRS和卤化酶基因,探究其合成天然产物的潜在能力。结合筛选结果,选取其中20株代表菌,经16S r RNA基因测序,对其进行系统发育分析。【结果】培养基E2和E3结合热处理的分离效果较好;86.1%的代表菌株对供试的细菌、病原真菌表现出了不同程度的抗菌活性,PKS I、PKS II、NRPS基因和卤化酶基因阳性检出率分别为16.7%、72.2%、25.0%和11.1%。具有活性功能的代表菌株经16S r RNA基因测序分析,分别属于链霉菌属(Streptomyces)、小单胞菌属(Micromonospora)、红球菌属(Rhodococcus)和游动放线菌属(Actinoplanes)4个属,其中链霉菌属(Streptomyces)为优势菌属,占60%以上。【结论】胀果甘草是我国传统的药用植物,其植株内部蕴藏着丰富的放线菌资源,并在次生代谢产物合成方面拥有巨大潜力,具有进一步开发的价值。     

百部内生放线菌的分离、分类及次级代谢潜力

【目的】以对叶百部块根为材料分离内生放线菌,并对分离菌株进行分类、抗菌活性和次级代谢产物合成基因研究。【方法】样品经过严格的表面消毒,选用4种培养基分离百部内生放线菌;分离菌株通过形态观察和16S rRNA序列分析进行分类鉴定;采用琼脂移块法测试分离菌株的抗菌活性;通过PCR检测分离菌株的PKS/NPRS和卤化酶基因;使用HPLC-UV/VIS-ESI-MS/MS分析发酵产物。【结果】从6个样品中获得18株内生放线菌,分属链霉菌属(Streptomyces)、小单孢菌属(Micromonospora)、假诺卡氏菌属(Pseudonocardia)和甲基杆菌属(Methylobacterium)。分离菌株绝大部分具有抗菌活性和次级代谢产物合成基因,其中13株对耐药金黄色葡萄球菌和/或绿脓杆菌有拮抗活性,17株具有PKS/NRPS基因,8株菌具有卤化酶基因,且卤化酶阳性代表菌株的发酵产物具有抗细菌活性和卤代化合物特征。【结论】百部作为一种传统中药,其内生放线菌以链霉菌和小单孢菌为主,在次级代谢产物合成方面具有很好的潜力,可作为一类重要微生物资源进行活性产物开发。     

一株来源于海洋的抗肿瘤放线菌的分离鉴定

从福建东海海滩土样品中分离到一株海洋放线菌FIM02-523, 该菌株的发酵产物具有抗肿瘤活性。菌株FIM02-523在多数培养基上生长良好, 橙色-暗棕色, 无气生菌丝, 不产生可溶性色素。系统发育、化学分类特征、形态特征、生理生化特性等分析表明菌株FIM02-523是小单孢菌属(Micromonospora), 可能是模式菌种青铜小单孢菌(Micromonospora chalcea)的一个菌株。     

小单胞菌属次级代谢产物及其生物活性研究进展

小单胞菌属(Micromonospora)为稀有放线菌,广泛分布在土壤、海洋和动植物中,其所产代谢产物不仅具有抗菌、抗肿瘤、抗HIV等多种生物活性,而且化学结构新颖多样。本文从化学结构分类、生物活性等方面对近几年已报道的小单胞菌属来源的重要天然产物做了简要综述,以期为小单胞菌天然产物的开发和应用奠定基础。     

海洋细菌抗菌和细胞毒活性的初步研究

从不同海域的生物、海水和海泥中分离海洋细菌,利用琼脂扩散法和MTT法对细菌培养液的乙酸乙酯提取物进行了抗菌和细胞毒活性筛选。比较了活性菌株与来源的相关性．结果表明,在分离的341株海洋细菌中。42株细菌的代谢产物具有抗菌活性,7株具有细胞毒活性,其中来源于海洋无脊椎动物和海藻的活性菌株比例(22％和11％)大于来源于海水和海泥的细菌(7％和5％)．细菌分类鉴定结果显示,具有活性的细菌大部分属于假单胞菌属、发光杆菌属、梭状芽孢杆菌属、交替单胞菌属和黄杆菌属．     

下呼吸道标本中嗜麦芽窄食单胞菌临床分离株耐药性分析

目的探讨嗜麦芽窄食单胞菌的耐药情况,为临床医师在按指南和结合临床选择抗菌药物时提供药敏监测资料。方法对我院2001年1月～2007年1月间从我院住院患者下呼吸道标本中分离的嗜麦芽窄食单胞菌临床菌株进行药物敏感性分析。结果2001年1月～2007年1月从我院住院患者下呼吸道标本中共分离出嗜麦芽窄食单胞菌133株。其中,60.2%(80/133)来源于咳痰标本,41株(30.8%)从经气管插管吸引物中分离得到。青霉素类对嗜麦芽窄食单胞菌抗菌活性较差;头孢菌素类药物中,以头孢吡肟的抗菌活性最强,敏感率达88.0%;嗜麦芽窄食单胞菌对各种氨基糖苷类药物的敏感性水平较为接近;氟喹诺酮类药物中,环丙沙星和左旋氧氟沙星敏感度较高,分别为52.6%和63.9%;嗜麦芽窄食单胞菌对亚胺培南耐药性高达91.0%;复方磺胺甲(口恶)唑对嗜麦芽窄食单胞菌具有较强的抗菌活性,敏感度为92.5%。结论下呼吸道标本中嗜麦芽窄食单胞菌对各种药物的耐药性较高,临床医师须参考实验室检验结果及药物敏感试验选择合理的抗菌药物治疗,提高疗效,避免耐药菌的进一步产生。     

北部湾近海珊瑚礁区系沉积物抗菌活性放线菌类群

通过对大肠埃希菌和枯草芽胞杆菌抗菌活性初步筛选,从北部湾近海珊瑚礁区5个沉积物样品中成功分离得到51株具有不同抗菌活性的放线菌,其中9株具有较强抗菌能力。根据这9株放线菌的菌落和孢子形态,可确定它们都属于链霉菌属。 RAPD-PCR分析表明这9株放线菌为6种不同类型,16S rDNA序列和系统发生树分析表明,9株放线菌可划分到4个大的类群6种不同类型,且结果显示RAPD-PCR聚类分析与16S rDNA序列聚类分析的结果具有较大的一致性。生理生化鉴定结果表明,分离株与亲缘关系最近的放线菌模式菌株的生理生化特征均存在差异,这说明分离株为放线菌新种的可能性比较大。这6种放线菌具有较为广谱的抑菌活性,并且抑菌活性均存在一定的差异,说明其可能分泌出多种结构功能不同的活性次生代谢产物。研究结果表明,广西北部湾近海珊瑚礁区系沉积物蕴藏着丰富的可供药物开发的放线菌资源。     

六种中药及其复方对鳗鲡致病性气单胞菌的体外抑制作用

针对病鳗内脏中分离的5 株致病性气单胞菌, 采用琼脂稀释法测定五倍子、石榴皮、大黄、虎杖、黄芩及黄连各味中药的最低抑菌浓度(MIC)和最低杀菌浓度(MBC); 再根据棋盘法设计15 种双联用药方和4 种三联用药方, 同样检测各组合配方的抑菌作用。实验结果表明, 6 味中药对养殖鳗鲡5 株致病性气单胞菌均有不同程度的抗菌效果, 其中五倍子的抑菌作用最强, 其次是大黄和石榴皮, 而黄连的抑菌效果最差; 15 种双联用药方较各味中药单用的抑菌活性绝大多数出现增强, 抑菌浓度至少减低39%, FICFIC≤0.5 表现显著增强抗菌活性的协同比例占23.3%; 4 种三联用药方对5 株致病性气单胞菌均具有显著的协同抑制效应, 复方中单味中药的抑菌浓度可以降低80%以上; 而双联用HC14 对4 株致病菌出现FIC≥2 的降低彼此抗菌活性的相互拮抗现象。由此说明合理运用不同中药的联用配伍, 不仅可提高单味中药的抗菌疗效, 而且大大减少了单一中药在实际养殖生产中的给药浓度, 降低药物在环境中的残留量, 防止残留药物造成环境污染, 并且降低用药成本, 提高水产养殖业的经济和社会效益。研究为中药复方防治细菌性鱼病提供科学理论参考。       

抗菌豆豉发酵菌株的筛选及其脂肽组分鉴定和特性研究

目的:从豆豉中分离广谱抗菌活性菌株,并鉴定其发酵产物中的抗菌成分.方法:采用生理生化实验结合16SrRNA序列测定法鉴定目标分离株,通过LC-MS和ESI/CID技术对其抗菌组分进行鉴定.结果:从8个豆豉样品中分离出7株具有抗菌活性菌株,其中抗菌活性较强的分离株NT-6为枯草芽孢杆菌(Bacillus subtilis),其发酵液抗菌提取物的主要成分是抗菌脂肽类物质iturin、fengycin、surfactin同系物的混合物.该提取物对供试革兰氏阳性、阴性细菌、霉菌等指示菌具有广谱的抗菌活性,在pH 2～ 12、121℃条件下加热30min活性不丧失,说明具有广泛的pH适应范围和良好的耐热性.结论:该菌株产生多组分抗菌脂肽,其抑菌谱宽,适应性好,显示了在食品、农业、医药等领域具有良好的应用前景.     

灯台树内生放线菌多样性及抗菌活性评价

从云南西双版纳采集7份灯台树样品,经过表面消毒,用4种分离培养基分离得到105株内生放线菌。经16S rRNA基因序列分析鉴定,分布于7个科9个属。利用5种植物病原真菌指示菌对所有菌株的发酵液进行抗菌活性检测。结果显示,有12.4%、14.3%、11.4%、12.4%、8.6%的菌株分别对镰刀霉、疫霉、赤星霉、苹果炭疽、白色念珠菌有抗性。对3株具有广谱抗菌活性的菌株进行再次发酵和抗菌活性复筛,结果显示这3株的抗菌活性稳定,并可能含有生物碱类化合物。     

大连地区海泥样品中分离的五株海洋放线菌的研究

对从大连小平岛地区海面下10~20 m处的海泥样品中分离的5株海洋放线菌进行了生理特征和抗菌活性的研究。抗菌活性实验初步表明,菌株S097,S187和S233具有较好的拮抗革兰氏阳性菌、革兰氏阴性菌和真菌测试菌株的活性,尤其是菌株S233对绿脓杆菌和白色假丝酵母的抑制活性很强。16 s rDNA序列分析结果表明,5株放线菌(S097,S187,S233,S239,L180)分别与Streptomyces argenteolusCGMCC 4.1693、S.flavofuscusNRRL B-8036、S.variabilisNRRL B-3984T、S.lit-m ocidiniNRRL B-3635和S.sulphureusNRRL B-1627T显示出最高的序列同源性(99%),这是这些菌种首次报道在大连地区的海泥样品中得到分离。利用I型聚酮合成酶(PKSI)兼并引物从菌株S187中扩增出了PKSI片段,揭示了该菌株生产I型聚酮类化合物的潜在能力。本文的研究结果为进一步开发利用大连地区海泥中的海洋放线菌资源奠定了基础。     

Two new species of the genus Micromonospora: Micromonospora chokoriensis sp. nov. and Micromonospora coxensis sp. nov., isolated from sandy soil

Two actinomycete strains, 2-19(6)(T) and 2-30-b(28)(T), which produced single, non-motile noduler to warty spore surfaces, were isolated from sandy soil in Chokoria, Cox's Bazar, Bangladesh. A polyphasic study was carried out to establish the taxonomic position of these strains. Morphological and chemotaxonomic characteristics of these strains coincided with those of the genus Micromonospora. Phylogenetic analysis using 16S rDNA sequences indicated that these strains should be classified in the genus Micromonospora. The 16S rDNA sequence of strain 2-19(6)(T )showed closest similarity to the type strains of M. mirobrigensis (98.9%) and M. carbonacea (98.8%), and the strain 2-30-b(28)(T) to the type strains of M. purpureochromogenes (99.4%), M. halophytica (99.3%) and M. aurantiaca (99.2%). Furthermore, a combination of DNA-DNA hybridization results and some differential physiological and biochemical properties indicated that these strains were distinguished from the phylogenetically closest relatives. These strains therefore represent two novel species, for which the name Micromonospora chokoriensis sp. nov. and Micromonospora coxensis sp. nov. are proposed. The type strains are 2-19(6)(T) (=JCM 13247(T) =MTCC 8535(T)) and 2-30-b(28)(T) (=JCM 13248(T)=MTCC 8093(T)).     

Construction and intergeneric conjugative transfer of a pSG5-based cosmid vector from Escherichia coli to the polyisoprene rubber degrading strain Micromonospora aurantiaca W2b

A non-rubber degrading mutant of the polyisoprene rubber degrading bacterium Micromonospora aurantiaca W2b lacking the capability to form halos on latex overlay agar plates was isolated after N-methyl-N-nitro-N-nitrosoguanidine mutagenesis. A 10.3-kb shuttle cosmid vector pGM446 was constructed from the Streptomyces cloning vectors pGM160 and pOJ446. This vector was transferred by conjugation from Escherichia coli to M. aurantiaca W2b. The frequency of formation of exconjugants with pGM446 was 3.6 x 10(-3). This vector could be useful for shotgun cloning of genes into the non-rubber degrading mutant L1 from M. aurantiaca W2b.     

High taxonomic diversity of Micromonospora strains isolated from Medicago sativa nodules in Western Spain and Australia

The genus Micromonospora has been found in nodules of several legumes and some new species of this genus were isolated from these plant organs. In this study we analysed the taxonomic diversity of Micromonospora strains isolated from alfalfa nodules in Spain and Australia on the basis of three phylogenetic markers, the rrs and gyrB genes and 16S-23S intergenic spacer (ITS). The genome analysis of selected strains representative of different clusters or lineages found after rrs, gyrB and ITS analyses confirmed the results obtained with these phylogenetic markers. They showed that the analysed strains belong to at least 18 Micromonospora species including previously described ones, such as Micromonospora noduli, Micromonospora ureilytica, Micromonospora taraxaci, Micromonospora zamorensis, Micromonospora aurantiaca and Micromonospora tulbaghiae. Most of these strains belong to undescribed species of Micromonospora showing the high taxonomic diversity of strains from this genus inhabiting alfalfa nodules. Although Micromonospora strains are not able to induce the formation of these nodules, and it seems that they do not contribute to fix atmospheric nitrogen, they could play a role related with the mechanisms of plant growth promotion and pathogen protection presented by Micromonospora strains isolated from legume nodules.     

拉鲁湿地自然保护区放线菌组成分析及生物活性测定

探究拉鲁湿地自然保护区的放线菌组成及其抑菌和酶活性,为放线菌新药物先导化合物和高活性酶的筛选提供资源。从拉鲁湿地自然保护区不同土壤类型、不同优势植被采集25份土样。用分散差速离心法分离了拉鲁湿地中温放线菌和低温放线菌。从中温放线菌中选择15株代表菌株进行了初步分类鉴定。采用打孔法检测了其对2株细菌和4株病原真菌的抑菌活性。结果表明：（1）拉鲁湿地放线菌数量从水生环境向陆地生态系统递增,中温放线菌数量显著多于低温放线菌;（2）拉鲁湿地土壤中分离到链霉菌属、小单孢菌属、诺卡氏菌属、马杜拉菌属、小链孢菌属5个放线菌属。其中以链霉菌属和小单孢菌属为优势属。链霉菌属以金色类群、白孢类群和粉红孢类群为主,小单孢菌分离到黄橙类群和黑褐类群;（3）供试菌株分解纤维素能力较强,分解蛋白质活性较低,具有抗菌活性的菌株很少,且抗菌活性较弱;（4）供试菌株耐毒性物质的能力较强。这些菌可用于毒害有机物污染物的处理。     

海洋真菌抗病原菌生物活性物质的研究

对分离自大连海域的海洋生物共附生真菌进行了抗菌活性的初筛与复筛,发现有6株具有抗表皮葡萄球菌和铜绿假单胞菌的活性,发现培养基成分及培养方式对活性菌株抗菌物质的产生有显著影响。菌株11-N2抗菌活性最强,其发酵液抗表皮葡萄球菌的效价相当于为氨苄青霉素11.4 U/mL,抗铜绿假单胞菌的效价相当于氨苄青霉素6.0 U/mL。通过硅胶柱层析对该菌株提取物的抗菌活性成分进行了初步追踪,发现二氯甲烷∶甲醇=15∶1洗脱组分具有最强活性,薄层层析显示该组分主要成分在254 nm紫外光下具有强吸收,薄层显色反应提示其主要成分可能为含胺基的甾体或三萜类、有机胺类、吲哚衍生物类化合物。     

青海高寒草甸土壤放线菌区系研究

2001～2002年从海北高寒草甸生态系统采集土样,用不同方法从中分离放线菌300余株,根据其形态和分类特征,分别归入小单孢菌属(Micromonospora)、诺卡氏菌属(Nocardia)、糖多孢菌属(Saccharopolyspora)、原小单孢菌属(Promicromonospora)和链霉菌属(Streptomyces),并将链霉菌归入7个类群。同时对230株中温菌和110株低温菌的部分酶活性及其对真菌和细菌的拮抗性进行了测定,发现链霉菌不仅具有许多酶活性,而且对真菌和细菌有拮抗性。     

Actinomycetes in lake muds: dormant spores or metabolically active mycelium?

Homogenization and ultrasonication experiments on samples of lake muds indicated that Micromonospora strains were present as a mixture of mycelium and spores. In contrast, strains of streptomycetes and nocardioforms appeared to be in the form of arthrospores or fragmentation spores respectively. Micromonospora strains originally isolated from lakes were able to grow in both native and enriched muds incubated in the laboratory. Numbers of streptomycetes and nocardioforms did not increase in these muds and are presumed to be relatively inactive in this habitat. We postulate that Micromonospora strains have an active role in the lacustrine environment as well as in soil.     

Diversity of Micromonospora strains isolated from nitrogen fixing nodules and rhizosphere of Pisum sativum analyzed by multilocus sequence analysis

It was recently reported that Micromonospora inhabits the intracellular tissues of nitrogen fixing nodules of the wild legume Lupinus angustifolius. To determine if Micromonospora populations are also present in nitrogen fixing nodules of cultivated legumes such as Pisum sativum, we carried out the isolation of this actinobacterium from P. sativum plants collected in two man-managed fields in the region of Castilla and León (Spain). In this work, we describe the isolation of 93 Micromonospora strains recovered from nitrogen fixing nodules and the rhizosphere of P. sativum. The genomic diversity of the strains was analyzed by amplified ribosomal DNA restriction analysis (ARDRA). Forty-six isolates and 34 reference strains were further analyzed using a multilocus sequence analysis scheme developed to address the phylogeny of the genus Micromonospora and to evaluate the species distribution in the two studied habitats. The MLSA results were evaluated by DNA-DNA hybridization to determine their usefulness for the delineation of Micromonospora at the species level. In most cases, DDH values below 70% were obtained with strains that shared a sequence similarity of 98.5% or less. Thus, MLSA studies clearly supported the established taxonomy of the genus Micromonospora and indicated that genomic species could be delineated as groups of strains that share > 98.5% sequence similarity based on the 5 genes selected. The species diversity of the strains isolated from both the rhizosphere and nodules was very high and in many cases the new strains could not be related to any of the currently described species.     

几株具有除莠活性的放线菌的鉴定

14 strains of Actinomycetes were isolated from soil samples collected in Yunnan China Experiments showed that they had activity of herbicide. In this paper,the morphological and chemotaxonomic characters of these strains were studied and they were identified as three genera of Actinomycetales respecitively, such as Streptomyces, Micromonospora and Nocardia.