虎皮楠内生真菌Aspergillus sp.DCS31化学成分研究

从长序虎皮楠韧皮部分离到内生真菌Aspergillus sp.DCS31,经ITS序列分析将该株菌鉴定为曲霉属真菌.我们从该菌的固体发酵物中分离得到了5个化合物,经质谱和核磁共振波谱解析,分别鉴定为asperpyroneD(1)、asperpyrone A(2)、flavasperone(3)、1,2-benzenedicarboxylic acid bis(2α-methyl heptyl)ester (4)、2,5-di-hydroxyphenylacetic acid methyl ester(5).化合物1、2、3、4为首次从虎皮楠内生真菌中分离得到.     

海洋来源小单孢菌Micromonospora rosaria SCSIO N160中大环内酯类化合物的分离鉴定

放线菌SCSIO N160是从南海海底沉积物中分离到的一株小单孢菌.从Micromonospora rosaria SCSIO N160的发酵液中,我们分离纯化了四个大环内酯类抗生素,通过质谱与核磁共振1H、13C NMR谱的解析,确定为rosamicin(1)、6108B(2)、M-4365 A1(3)和M4365-G1 (4).     

五倍子内生菌的分离与鉴定

目的分离五倍子内生菌,并进行筛选和鉴定。方法分别采用牛肉膏蛋白胨固体、液体培养基,高氏1号培养基,马丁孟加拉红培养基外加4‰的国产硫酸庆大霉素(800万单位)四种培养基对五倍子内生菌进行分离。结果得到5株菌株,经菌落形态显微观察与16S rDNA序列分析鉴定,5株菌株均为革兰阳性菌;A1、A5和B1为杆菌,同属芽胞杆菌属;A3为球菌,微球菌属;A6为球菌,葡萄球菌属;A5与B1同源性最高,达到100%。结论从五倍子中分离得到5株内生细菌,将有利于五倍子的深入开发利用。     

热浪岛珊瑚礁泥砂真菌多样性及真菌Cladosporium sp. GXIMD02067天然产物分离与鉴定

【背景】海洋沉积物真菌富含生物活性天然产物,但珊瑚礁泥砂真菌及其天然产物的研究较少。【目的】分离珊瑚礁泥砂真菌及其天然产物,探究珊瑚礁泥砂来源真菌多样性,为海洋真菌天然产物开发奠定基础。【方法】采用稀释涂布平板法分离马来西亚热浪岛珊瑚礁泥砂真菌并基于ITSrDNA序列分析鉴定真菌;综合运用硅胶柱、反相柱和制备HPLC色谱技术分离枝孢属真菌(Cladosporium sp.) GXIMD02067的天然产物,通过核磁共振波谱技术和文献数据比对鉴定化合物结构。【结果】19株真菌被分离,隶属1纲4目4科6属,包括7株曲霉属(Aspergillus)、6株青霉属(Penicillium)、2株枝孢属(Cladosporium)、1株蜡蚧菌属(Lecanicillium)、2株路霉属(Lulworthia)和1株Parengyodontium。GXIMD02065和GXIMD02066 ITS rDNA序列的相似度小于87%,是潜在新菌种。7个化合物从Cladosporium sp. GXIMD02067中分离并鉴定为pyrenocine A (1)、pyrenocine B (2)、胸腺嘧啶脱...     

艾纳香内生真菌粉红粘帚霉抗菌次生代谢产物

植物内生真菌一直是发现结构新颖、活性广泛的化合物的重要宝库。文中对一株艾纳香内生真菌粉红粘帚霉Clonostachysrosea进行化学研究,通过活性跟踪手段,结合硅胶柱色谱、凝胶色谱、以及半制备液相色谱技术从该菌株的发酵提取物中共分离获得6个单体化合物,经波谱学技术结合质谱鉴定其分别为verticillin A (1)、(S)-(+)-fusarinolic acid (2)、8-hydroxyfusaric acid (3)、cerebroside C (4)、3-Maleimide-5-oxime (5)以及bionectriol A(6)。所有化合物进行了体外抗大肠埃希菌、金黄色葡萄球菌、枯草芽孢杆菌以及铜绿假单胞菌4株细菌的活性评价,其中1、4和6对3株细菌表现出显著的抑菌活性,MIC值2–16μg/mL。研究结果为从黎药植物艾纳香的内生真菌中寻找新型抗生素提供重要参考。     

中国南海来源海洋链霉菌SCSIO 11863中Enterocins的分离鉴定(英文)

从南海底泥样品中分离到一株具有较强抗菌活性的放线菌株SCSIO 11863。表型和进化系统分析数据表明该菌属于链霉菌属并命名为Streptomyces sp.SCSIO 11863(KC904267)。16S rDNA序列分析表明它与白浅灰链霉菌Streptomyces albogriseolus strain ABRIINW EA1145(GQ925802)有99%的相似性。对该菌发酵液乙酸乙酯萃取物进行活性追踪分离得到了两个结构类似化合物,分别为Enterocin(1)和5-deoxyenterocin(2)。     

马铃薯内生拮抗真菌E-19的分离、鉴定及其次生代谢产物研究北大核心CSCD

采用组织分离法,从马铃薯健康植株中分离得到一株内生真菌(E-19),根据形态学特征和18S r DNA序列分析,将其鉴定为Bipolaris eleusines。平板对峙培养结果显示,该菌对马铃薯晚疫病菌有较强的抑制作用;采用硅胶柱色谱、Sephadex LH-20凝胶柱色谱、半制备HPLC等方法从Bipolaris eleusines发酵液中分离纯化获得6个化合物;通过波谱学数据及理化性质确定它们的结构分别为:Isosativenediol(1)、Dihydroprehelminthosporo(2)、Helminthosporol(3)、Drechslerines C(4)、Drechslerines A(5)、Secolongifolene diol(6)。以上化合物均为首次从该菌中分离得到。     

生物滤塔体系好氧反硝化菌的分离鉴定与特性研究

从实验室生物滤塔填料的生物膜上, 经选择性培养基筛选, 分离出4株好氧反硝化菌。好氧状态下4种菌的40 h反硝化率均大于80%, 其中菌种A1反硝化率可达到99.05%。跟踪菌种反硝化过程中氮元素24 h变化过程, 发现4株菌除A1外都有亚硝酸根积累。菌种A1为短杆菌, 革兰氏阴性。生理生化特性研究与16S rDNA 序列测定(GenBank接受号DQ836052.1)初步判定菌种A1为假单胞菌Pseudomonas putida。适于菌A1生长的初始pH值是7.0左右, 温度30℃左右, 当DO大于2.0 mg/L时, DO的变化对菌种A1的反硝化效果影响很小。     

产木聚糖酶厌氧真菌菌株筛选及产酶培养条件研究*

从12株分离自反刍动物瘤胃及粪样的厌氧真菌中筛选到一株木聚糖酶高产菌,编号为A4,初步鉴定为Neocallimastix属菌。以稻草秸、玉米秸、花生秸、滤纸片段为发酵底物,经39℃厌氧培养,A4菌产生的木聚糖酶活分别为14.31U/mL、11.39U/mL、6.99U/mL和13.38U/mL。对A4菌产生木聚糖酶的条件进行优化,结果发现,培养基中无细胞瘤胃液浓度对A4菌产生的木聚糖酶活无显著影响;但酵母膏浓度从1.0g/L降至0.5g/L后,A4菌产生的木聚糖酶活显著下降(P<0.05)。     

马铃薯内生拮抗真菌E-19的分离、鉴定及其次生代谢产物研究

采用组织分离法,从马铃薯健康植株中分离得到一株内生真菌(E-19),根据形态学特征和18S r DNA序列分析,将其鉴定为Bipolaris eleusines。平板对峙培养结果显示,该菌对马铃薯晚疫病菌有较强的抑制作用;采用硅胶柱色谱、Sephadex LH-20凝胶柱色谱、半制备HPLC等方法从Bipolaris eleusines发酵液中分离纯化获得6个化合物;通过波谱学数据及理化性质确定它们的结构分别为:Isosativenediol(1)、Dihydroprehelminthosporo(2)、Helminthosporol(3)、Drechslerines C(4)、Drechslerines A(5)、Secolongifolene diol(6)。以上化合物均为首次从该菌中分离得到。     

海洋链霉菌Streptomyces lusitanus SCSIO LR32中芳酰胺类代谢产物的研究

采用硅胶柱色谱和半制备反相高效液相色谱分离方法,对南海海洋放线菌Streptomyces lusitanus SCSIOLR32的次级代谢产物进行了研究,分离得到四个酰胺类化合物,经MS1、H和13 C NMR波谱分析鉴定为二甲基甲苯2,4-二氨基甲酸甲酯(1),甲苯2,4-二氨基甲酸乙酯(2),甲苯2,6-二氨基甲酸甲酯(3)和甲苯2,6-二氨基甲酸乙酯(4)。运用X-单晶衍射确定了1的结构式。其中化合物2和4是首次从自然界中分离得到。采用16S分子生物学方法鉴定该菌株为链霉菌属放线菌。     

珠江口沉积物来源链霉菌SCSIO 40020中bafilomycins的鉴定及其生物合成基因簇的异源表达

[目的] 从珠江口沉积物来源的菌株SCSIO 40020中分离bafilomycins,并对其生物合成基因簇进行克隆和异源表达研究。[方法] 通过分析菌株SCSIO 40020的16S rRNA基因序列并构建系统发育树以鉴定菌种,以柱层析法和制备色谱法对次级代谢产物进行分离纯化,借助波谱学手段完成单体化合物的结构鉴定,采用生物信息学分析定位bafilomycins的生物合成基因簇,通过筛选菌株SCSIO 40020基因组的细菌人工染色体文库和接合转移将bafilomycins生物合成基因簇导入3种链霉菌进行异源表达,利用高效液相色谱检测异源表达菌株的发酵产物。[结果] 菌株SCSIO 40020被鉴定为链霉菌属菌株,从其发酵产物中分离鉴定了2个单体化合物bafilomycins A₁和D。克隆了链霉菌SCSIO 40020中bafilomycins的生物合成基因簇并推导了其生物合成途径,在3种链霉菌中表达产生了bafilomycins。[结论] 从珠江口环境中获得了一株产生bafilomycins的链霉菌SCSIO 40020,成功建立了该菌株次级代谢产物生物合成基因簇的异源表达体系,并首次在链霉菌Streptomyces lividans SBT18、Streptomyces coelicolor M1154和Streptomyces albus J1074中进行了表达,获得了bafilomycins,为后续bafilomycins结构类似物的生产和链霉菌SCSIO 40020中新结构活性化合物的挖掘奠定了基础。     

Streptomyces oceani sp. nov., a new obligate marine actinomycete isolated from a deep-sea sample of seep authigenic carbonate nodule in South China Sea

A novel aerobic actinomycete strain, designated as SCSIO 02100(T), was isolated from a deep sea sediment sample collected from Northern South China Sea at a depth of 578 m. This isolate requires sea water or a sodium-supplemented medium for growth. BLAST searches based on the almost full length of the 16S rRNA gene sequence, showed that strain SCSIO 02100(T) had the highest similarities with Streptomyces armeniacus (JCM 3070(T)) (97.1 %). Phylogenetic trees reconstructed on the basis of 16S rRNA gene sequences revealed that strain SCSIO 02100(T) formed a distinct lineage with S. nanshensis SCSIO 01066(T) with 96.9 % similarity. Further analysis of the polyphasic taxonomic data, including morphological, phenotypic and chemotaxonomic properties, showed that strain SCSIO 02100(T) could be readily distinguished from the most closely related members of the genus Streptomyces. Thus, based on the polyphasic taxonomic data, a novel species, Streptomyces oceani sp. nov., is proposed, with the type strain SCSIO 02100(T) (=DSM 42043(T) = CGMCC 4.7007(T)).     

2株海洋来源产浅蓝霉素A的异壁放线菌的分离和鉴定

利用抗菌及卤虫致死活性模型,从中国南海海底沉积物来源的微生物中筛选到2株放线菌SCSIO WJ01和SCSIO ZJ63,其发酵产物具有较强活性,经16S rRNA基因序列分析这2株放线菌均为异壁放线菌Actinoalloteichus sp.。HPLC-DAD分析显示2株放线菌能产生同一个主要的次级代谢产物,通过正相硅胶柱色谱、反相中压柱色谱、半制备高效液相色谱等手段,从SCSIO WJ01的发酵产物中分离获得了该化合物,运用ESI-MS、1H及13C NMR波谱分析鉴定为浅蓝霉素A(Caerulomycin A)。此外,还从SCSIO WJ01的发酵产物中分离鉴定了浅蓝霉素D。     

Antimycin A-producing nonphytopathogenic Streptomyces turgidiscabies from potato

Aim:  To detect if substances with mammalian cell toxicity are produced by Streptomyces turgidiscabies and Streptomyces scabiei isolated from potato scab lesions. Methods and Results:  In vitro cultures of phytopathogenic and nonphytopathogenic strains of S. scabiei and S. turgidiscabies, isolated from scab lesions of potato tubers originating from nine different cultivars from Finland and Sweden, were tested for toxicity using the rapid spermatozoan motility inhibition assay, previously shown useful in the detection of many different Streptomyces toxins and antimicrobial compounds. Purified toxins were used as reference. Three nonphytopathogenic strains of S. turgidiscabies were found to produce antimycin A when cultured on solid medium. Conclusions:  Boar sperm-motility-inhibiting substances are produced by strains of S. turgidiscabies and S. scabiei. The most powerful inhibitory substance, produced by three nonphytopathogenic S. turgidiscabies strains, was identified as antimycin A. The phytotoxic compounds thaxtomin A and concanamycin A did not inhibit sperm motility even at high doses. Significance and Impact of the Study:  The presence of antimycin A-producing Streptomyces strains, nonpathogenic to potato, was unexpected but important, considering the high mammalian toxicity of this cytochrome bc-blocking antibiotic.     

药用植物内生放线菌的生物活性及菌株D62的代谢产物分析

利用琼脂移块法及WST-8法分别对分离自西双版纳药用植物的165株内生放线菌进行了抗菌、抗肿瘤活性测定。结果显示,超过42%的菌株对病原菌表现出拮抗活性,且对病原真菌的总体拮抗活性明显强于土壤放线菌;78%的菌株表现出抗肿瘤活性,且大部分菌株(54.5%)具有强抗肿瘤活性。选取其中对真菌及肿瘤细胞均有高抑制活性的菌株D62,并对其次生代谢产物进行了进一步的研究,共分离得6个化合物,分别是Antimycin A4a(1),Antimycin A7a(2)、Antimycin A2a(3)、Antimycin A1a(4)、10-hydroxy-10-methyl-dodec-2-en-1,4-olide(5)及6-(2-(4-aminophenyl)-2-oxoethyl)-3,5-dimethyl-tetrahydropyran-2-one(6),其中化合物6为新化合物。以上结果表明药用植物内生放线菌作为一类新的微生物资源具有很好的开发潜力。     

一株南海红树林底泥抗真菌放线菌(No.H74-18)的化学成分研究

对我国南海红树林底泥中分离的一株放线菌(No.H74-18)的发酵菌丝体采用95%乙醇提取,并对具有抗真菌活性的乙酸乙酯部位进行研究,通过硅胶开放柱色谱分离得到了一个结晶样品。通过制备型反相高效液相色谱分离,从此结晶样品中分离纯化出3个化合物,经NMR、MS等光谱学方法分别鉴定为抗霉素A1(1)、抗霉素A2a(2)、抗霉素A3(3),这些化合物都是抗霉素类化合物。采用LC-MS联用技术分析了此结晶样品中存在的抗霉素类的可能组份。     

海洋放线菌Streptomyces variabilis strain 6-1次级代谢产物的研究

目的:对来自海洋软珊瑚的链霉菌6-1(Streptomyces variabilis strain 6-1)进行次级代谢产物的分离和鉴定,寻找具有生物活性的化合物,为人类健康服务。方法:采用液体培养基对分自海洋软珊瑚Scleronephthya sp中的链霉菌6-1(Streptomyces variabi-lis strain 6-1)进行发酵培养,用乙酸乙酯对发酵液进行萃取;采用半制备高效液相色谱(semi-preparative HPLC)分离方法对乙酸乙酯萃取物进行分离纯化,得到单体化合物;运用电喷雾质谱(ESI-MS)、核磁共氢振(1H NMR)、核磁共振碳谱(13C NMR)和物理性质对所得单体化合物进行结构鉴定。结果:从海洋链霉菌6-1(strain 6-1)发酵液的乙酸乙酯萃取物中分离得到3个单体化合物,分别鉴定为:7,4'-二羟基异黄酮(1)、5,7,4'-三羟基异黄酮(2)和丁烯酸内酯-Ⅰ(3)。结论:丁烯酸内酯-Ⅰ是从链霉菌属首次分离得到,化合物1和2均是从Streptomyces variabilis中首次分离得到;变异链霉菌6-1(Streptomyces variabilis strain 6-1)可以作为活性化合物3(丁烯酸内酯-Ⅰ)的重要来源。     

海洋链霉菌Streptomyces sp.SCSIO 1667中吲哚咔唑生物碱类成分的研究

运用大孔树脂柱及硅胶柱层析对南海海洋链霉菌Streptomyces sp.SCSIO 1667的代谢产物进行了研究,从SCSIO 1667菌株的发酵产物中分离得到两个indolocarbazole生物碱类化合物,经质谱,1D、2D NMR波谱数据分析鉴定为星形孢菌素(staurosporine,1)和K-252d(2)。     

Discovery of Potent Broad Spectrum Antivirals Derived from Marine Actinobacteria

Natural products provide a vast array of chemical structures to explore in the discovery of new medicines. Although secondary metabolites produced by microbes have been developed to treat a variety of diseases, including bacterial and fungal infections, to date there has been limited investigation of natural products with antiviral activity. In this report, we used a phenotypic cell-based replicon assay coupled with an iterative biochemical fractionation process to identify, purify, and characterize antiviral compounds produced by marine microbes. We isolated a compound from Streptomyces kaviengensis, a novel actinomycetes isolated from marine sediments obtained off the coast of New Ireland, Papua New Guinea, which we identified as antimycin A1a. This compound displays potent activity against western equine encephalitis virus in cultured cells with half-maximal inhibitory concentrations of less than 4 nM and a selectivity index of greater than 550. Our efforts also revealed that several antimycin A analogues display antiviral activity, and mechanism of action studies confirmed that these Streptomyces-derived secondary metabolites function by inhibiting the cellular mitochondrial electron transport chain, thereby suppressing de novo pyrimidine synthesis. Furthermore, we found that antimycin A functions as a broad spectrum agent with activity against a wide range of RNA viruses in cultured cells, including members of the Togaviridae, Flaviviridae, Bunyaviridae, Picornaviridae, and Paramyxoviridae families. Finally, we demonstrate that antimycin A reduces central nervous system viral titers, improves clinical disease severity, and enhances survival in mice given a lethal challenge with western equine encephalitis virus. Our results provide conclusive validation for using natural product resources derived from marine microbes as source material for antiviral drug discovery, and they indicate that host mitochondrial electron transport is a viable target for the continued development of broadly active antiviral compounds.