江浙蝮蛇毒中性磷脂酶A_2的荧光光谱学研究

用荧光光谱方法研究了江浙蝮蛇毒中性磷脂酶A_2(NPLA_2).研究结果表明NPLA_2分子中确实含有一个色氨酸残基.且位于NPLA_2分子表面;我们还发现荧光探针bis-ANS在NPLA_2分子上有一结合区,其解离平衡常数为11.6μmol/L ;利用结合了的bis-ANS与NPLA_2分子中色氨酸残基之间的能量传递计算出两者之间的距离为17.7(?).     

磷酸丙糖异构酶的折叠及稳定性研究

从鸡胸肌中纯化出磷酸丙糖异构酶(triosephosphateisomerase,TIM),通过蛋白质内源荧光,圆二色性,紫外吸收二阶导数光谱等多种研究溶液构象的方法,对TIM被盐酸胍和热变性过程进行了详细的研究.结果表明,用不同测量方法得到TIM的变性过程均高度协同,没有观察到折叠中间态,应用单分子二态去折叠模型计算了TIM去折叠的热力学参数.通过圆二色光谱在222nm处的变化监测的TIM热变性过程也是高度协同的二态过程,天然态TIM的表观Tm为64.6℃.在低浓度盐酸胍存在下,TIM的热稳定性降低.讨论了二体蛋白质的可能去折叠机制,证明在使用的实验条件下磷酸丙糖异构酶去折叠过程中二级结构与三级结构的变化是同时发生的,其去折叠遵循观察不到二体解离的表观二态过程.     

江浙蝮蛇毒中性磷脂酶A_2的荧光光谱学研究

用荧光光谱方法研究了江浙蝮蛇毒中性磷脂酶A_2(NPLA_2).研究结果表明NPLA_2分子中确实含有一个色氨酸残基.且位于NPLA_2分子表面;我们还发现荧光探针bis-ANS在NPLA_2分子上有一结合区,其解离平衡常数为11.6μmol/L ;利用结合了的bis-ANS与NPLA_2分子中色氨酸残基之间的能量传递计算出两者之间的距离为17.7(?).     

红花菜豆凝集素的荧光光谱学研究

利用荧光光谱方法研究了红花菜豆凝集素（Ｐｈａｓｅｏｌｕｓｃｏｃｃｉｎｅｕｓｖａｒ．ｒｕｂｒｏｎａｎｕｓｌｅｃｔｉｎ,简称ＰＣＬ）,结果表明ＰＣＬ分子各亚基中的两个色氨酸（Ｔｒｐ）残基分别位于ＰＣＬ分子表面和分子内。标记了ＤＮＳ的ＰＣＬ荧光偏振研究指出,致使ＰＣＬ在１０ｍｍｏｌ／ＬＳＤＳ条件下失活的主要原因可能是亚基解离。荧光偏振研究还表明,甲状腺球蛋白、甘露聚糖、海参多糖硫酸酯可与ＰＣＬ结合。荧光探针ｂｉｓ－ＡＮＳ与ＰＣＬ的结合可引起明显的荧光增强和发射谱蓝移,表明ＰＣＬ分子中存有疏水区域。结合了的ｂｉｓ－ＡＮＳ还可和ＰＣＬ中的Ｔｒｐ发生能量传递。     

N-溴代琥珀酰亚胺修饰菌紫质中色氨酸的光谱学研究

采用紫外-可见吸收光谱和荧光光谱方法研究了菌紫质（Bacteriorhodopsin,bR）中的8个色氨酸（Tryptophan,Trp）残基在被N-溴代琥珀酰亚胺（N-bromosuccinimide,NBS）修饰过程中的残基数目及对应的光谱变化。研究结果显示：随着NBS／bR摩尔比例增加逐渐被修饰的Trp残基有4个左右,如果NBS过量,则Trp残基的修饰个数最终可迭6～7个;伴随化学修饰出现Trp残基特征荧光峰值下降及峰位蓝移。研究结果揭示了bR中Trp残基可能的三种结构分布,对于进一步弄清bR中Trp-视黄醛（Retinal）偶联能量传递、单独Trp残基的荧光寿命和Tm残基在膜蛋白结构和功能中的作用具有积极而重要的意义。     

家蝇幼虫抗菌肽MDL-3分子结构的荧光特性

研究了家蝇幼虫抗菌肽MDL-3的荧光光谱和淬灭剂对内源性荧光的影响.家蝇幼虫抗菌肽MDL-3在280nm波长的激发光时,荧光光谱为Tyr残基和Trp残基共同提供,KI不能淬灭抗菌肽MDL-3的Trp残基的荧光,而Acr只能淬灭71%(f=0.71)的抗菌肽MDL-3中的Trp残基的荧光,说明Trp残基不是位于抗菌肽分子的表面,而是位于分子的内部.     

红花菜豆凝集素的荧光光谱学研究

利用荧光光谱方法研究了红花菜豆凝集素,结果表明ＰＣＬ分子各亚基中的两外色氨酸残基分别位于ＰＣＬ分子表面和分子内,标记了ＤＮＳ的ＰＣＬ荧光偏振研究指出,致使ＰＣＬ在１０ｍｍｏｌ／Ｌ ＳＤＳ条件下失活的主要原因可能是亚基解离。荧光偏振研究还表明,甲状腺球蛋白、甘露聚糖,海参多糖硫酸酯可与ＰＣＬ结合,荧光探针ｂｉｓ－ＡＮＳ与ＰＣＬ的结合可引起明显的荧光增强和发射谱蓝移,表明ＰＣＬ分子中存有疏水区域,结合     

犁头尖凝集素色氨酸(Trp)所处微环境及构象的研究

本文通过荧光淬灭的方法对犁头尖凝集素(TDL)的内源荧光进行了淬灭研究.研究结果表明:丙烯酰胺与TDL分子中Trp残基的可接近程度达到100%,而KT和CsCl与Trp残基的可接近程度分别为83.3%和50%,说明TDL中大部分Trp残基位于分子表面或近表面区域,且位于表面的Trp残基所处微环境中带正电荷基团约为带负电荷基团的一倍.荧光淬灭数据分析表明这三种淬灭剂对TDL的荧光淬灭作用均属动态淬灭机制.此外,本文还研究了变性剂对TDL凝血活性与荧光光谱的影响,研究表明同浓度的盐酸胍对TDL变性作用明显强于脲,TDL活性的丧失主要是由于其活性中心被变性剂破坏而造成.     

腐生型眼虫Astasia longa两种TIM同工酶cDNA的克隆和分析

利用 3′ RACE和 5′ RACE技术 ,从腐生型眼虫长变胞藻 (Astasialonga)克隆了磷酸丙糖异构酶(TIM)的两个同工酶cDNA全序列。分析表明 :它们分别编码定位于细胞质的胞质型TIM (cTIM)和定位于质体的质体型TIM (pTIM) ;后者的N端具有引导该酶定位到质体中去的典型“前导序列”。根据这些事实我们推测腐生型眼虫A .longa质体中可能存在功能性的TIM ,并进一步认为该质体可能不只是一般意义上的“叶绿体退化的残迹” ,而仍是一种至少有TIM参与其代谢活动的功能性细胞器     

分子伴侣GroE系统能量传递机制的研究

用SwissPDBViewer软件对分子伴侣GroE系统与底物的相互作用进行了模拟 ,结果表明 :GroEL顶端结构域在GroES和靶蛋白结合之后发生了明显的变化 ;GroEL的cis环上有与三磷酸腺苷ATP相结合的位点 ,ATP水解之后形成的ADP与活性中心的残基相结合 ,而这种结合除导致残基Thr30的构型发生了变化之外 ,其它残基的空间位置和构型基本保持不变 ,暗示其它残基在能量传递过程中形成了刚性骨架 ,而与ADP分子磷酸键结合的残基Thr30则是能量传递的力点。     

Recent advances in the study of Kaposi's sarcoma-associated herpesvirus replication and pathogenesis

It has now been over twenty years since a novel herpesviral genome was identified in Kaposi's sarcoma biopsies. Since then, the cumulative research effort by molecular biologists, virologists, clinicians, and epidemiologists alike has led to the extensive characterization of this tumor virus, Kaposi's sarcoma-associated herpesvirus(KSHV; also known as human herpesvirus 8(HHV-8)), and its associated diseases. Here we review the current knowledge of KSHV biology and pathogenesis, with a particular emphasis on new and exciting advances in the field of epigenetics. We also discuss the development and practicality of various cell culture and animal model systems to study KSHV replication and pathogenesis.     

A Unique Protease Cleavage Site Predicted in the Spike Protein of the Novel Pneumonia Coronavirus (2019-nCoV) Potentially Related to Viral Transmissibility

正Dear Editor,In December 2019, a novel human coronavirus caused an epidemic of severe pneumonia(Coronavirus Disease 2019,COVID-19) in Wuhan, Hubei, China(Wu et al. 2020; Zhu et al. 2020). So far, this virus has spread to all areas of China and even to other countries. The epidemic has caused 67,102 confirmed infections with 1526 fatal cases     

Curcuminoids as inhibitors of thioredoxin reductase: A receptor based pharmacophore study with distance mapping of the active site

Curcumin is the yellow pigment of turmeric that interacts irreversibly forming an adduct with thioredoxin reductase (TrxR), an enzyme responsible for redox control of cell and defence against oxidative stress. Docking at both the active sites of TrxR was performed to compare the potency of three naturally occurring curcuminoids, namely curcumin, demethoxy curcumin and bis-demethoxy curcumin. Results show that active sites of TrxR occur at the junction of E and F chains. Volume and area of both cavities is predicted. It has been concluded by distance mapping of the most active conformations that Se atom of catalytic residue SeCYS498, is at a distance of 3.56 from C13 of demethoxy curcumin at the E chain active site, whereas C13 carbon atom forms adduct with Se atom of SeCys 498. We report that at least one methoxy group in curcuminoids is necessary for interation with catalytic residues of thioredoxin. Pharmacophore of both active sites of the TrxR receptor for curcumin and demethoxy curcumin molecules has been drawn and proposed for design and synthesis of most probable potent antiproliferative synthetic drugs.     

Synthesis and antimicrobial studies of hydrazone derivatives of 4-[3-(2,4-difluorophenyl)-4-formyl-1H-pyrazol-1-yl]benzoic acid and 4-[3-(3,4-difluorophenyl)-4-formyl-1H-pyrazol-1-yl]benzoic acid

Microbial resistance to antibiotics is an unresolved global concern, which needs urgent and coordinated action. One of the guidelines of the Centers for Disease Control and Preventions (CDC) to combat antibiotic resistance is the development of new antibiotics to treat drug-resistant bacteria. In our effort to find new antibiotics, we report the synthesis and antimicrobial studies of 30 new pyrazole derivatives. These novel molecules have been synthesized by using readily available starting materials and benign reaction conditions. Some of these molecules have shown activity with MIC values as low as 0.78?µg/mL against four bacterial strains; Staphylococcus aureus, methicillin-resistant S. aureus, Bacillus subtilis, and Acinetobacter baumannii. Furthermore, active molecules are non-toxic to mammalian cell line.

     

Comparative morphology of the carpel in the Liliaceae: Hewardieae, Petrosavieae, and Tricyrteae

The young pistils in the melanthioid tribes, Hewardieae, Petrosavieae and Tricyrteae, are uniformly tricarpellate and syncarpous. They lack raphide idioblasts. All are multiovulate, with bitegmic ovules. The Petrosavieae are marked by the presence of septal glands and incomplete syncarpy. Tepals and stamens adhere to the ovary in the Hewardieae and the Petrosavieae but not in the Tricyrteae. Two vascular bundles occur in the stamens of the Hewartlieae and Tricyrtis latifolia. Ventral bundles in the upper part of the ovary of the Hewardieae are continuous with compound septal bundles and placental bundles in the lower part. Putative ventral bundles occur in the alternate position in the Tricyrteae and putative placental bundles in the opposite. position in the Petrosavieae. The dichtomously branched stigma in each carpel of the Tricyrteae is supplied by a bifurcated dorsal bundle.     

Novel compounds with potent CDK9 inhibitory activity for the treatment of myeloma

Cyclin-dependent kinases (CDKs) and Polo-like kinases (PLKs) play key role in the regulation of the cell cycle. The aim of our study was originally the further development of our recently discovered polo-like kinase 1 (PLK1) inhibitors. A series of new 2,4-disubstituted pyrimidine derivatives were synthesized around the original hit, but their PLK1 inhibitory activity was very poor. However the novel compounds showed nanomolar CDK9 inhibitory activity and very good antiproliferative effect on multiple myeloma cell lines (RPMI-8226).