5个山羊品种CSN1S2基因的Alw26Ⅰ酶切多态性分析

利用PCR RFLP技术对西农萨能奶山羊、关中奶山羊、陕南白山羊、安哥拉山羊和波尔山羊5个品种的170个个体的αs2酪蛋白(CSN1S2)基因进行多态性分析,结果表明:扩增大小为310bp的片段经限制性内切酶Alw26Ⅰ酶切后表现多态,且5个山羊品种该基因座位均处于Hardy Weinberg平衡状态。西农萨能奶山羊、关中奶山羊、陕南白山羊、安哥拉山羊和波尔山羊的基因杂合度/有效等位基因数/Shaanon信息熵/PIC值分别为0.1589/1.1889/0.2955/0.1463,0.4114/1.6981/0.6017/0.5171,0.1653/1.1980/0.3046/0.1516,0.0646/1.0691/0.1463/0.0625,0.0541/1.0572/0.1270/0.0526。分析结果显示,关中奶山羊的遗传多样性最丰富,表现为高度多态;其次是西农萨能奶山羊和陕南白山羊,而安哥拉山羊和波尔山羊的遗传变异程度最低。     

5个山羊品种CSN1S2基因的A/W26Ⅰ酶切多态性分析

利用PCR-RFLP技术对西农萨能奶山羊、关中奶山羊、陕南白山羊、安哥拉山羊和波尔山羊5个品种的170个个体的αs2酪蛋白(CSN1S2)基因进行多态性分析,结果表明:扩增大小为310 bp的片段经限制性内切酶Alw26Ⅰ酶切后表现多态,且5个山羊品种该基因座位均处于Hardy-Weinberg平衡状态.西农萨能奶山羊、关中奶山羊、陕南白山羊、安哥拉山羊和波尔山羊的基因杂合度/有效等位基因数/Shaanon信息熵/PIC值分别为0.1589/1.1889/0.2955/0 1463,0.4114/1.6981/0.6017/0.5171,0 1653/1.1980/0 3046/0.1516,0 0646/1.0691/0.1463/0.0625,0 0541/1.0572/0.1270/0.0526.分析结果显示,关中奶山羊的遗传多样性最丰富,表现为高度多态;其次是西农萨能奶山羊和陕南白山羊,而安哥拉山羊和波尔山羊的遗传变异程度最低.     

山羊乳中上皮粘蛋白MUC1的遗传多态性

采用SDS PAGE方法研究了波尔山羊、成都麻羊、安哥拉山羊×藏山羊F1、建昌黑山羊、安哥拉山羊×建昌黑山羊F1乳MUC1的生化遗传特性。结果表明 :山羊乳MUC1呈现出多态性 ,表现为 1条或 2条迁移率不同的区带。SDS PAGE分析发现 4种分子量的MUC1区带 ,即A、B、C和D ,分子量分别为 2 6 4、 2 41、 2 31和 2 2 0kDa ,大于牦牛和荷斯坦牛乳中的MUC1。基因型与山羊品种有关 ,在波尔山羊中最丰富 ,有 10种基因型 ,基因杂合度为 0 72 72 ;建昌黑山羊有 3种基因型 ,基因杂合度为 0 495 0 ;而在成都麻羊中仅发现CC基因型。经适合性检验 ,波尔山羊、成都麻羊、建昌黑山羊乳MUC1基因座基因型分布符合哈代 -温伯格定律     

河南地方山羊品种的遗传多样性

采用18个微卫星位点对河南省5个地方山羊品种（牛腿山羊、槐山羊、河南奶山羊、太行黑山羊和伏牛白山羊）的遗传多样性进行了评价.结果表明：18个微卫星位点在5个山羊品种均为高度多态;5个山羊品种的多态信息含量、群体杂合度、有效等位基因数值较高,说明其遗传多样性和各品种内的遗传变异比较丰富;聚类分析显示,牛腿山羊与太行黑山羊的关系较近,与河南奶山羊的关系较远.群体遗传分化系数和群体遗传距离表明,河南省地方山羊的变异主要存在于品种内,品种间的变异相对较小.结合5个山羊品种的实际生态地理分布,提出了避免近交,并有选择地进行品种间杂交的保种模式.     

大足黑山羊与萨能奶山羊在发情周期内INH B、ACT A和FSH浓度变化

为了研究发情周期内血浆INH B(Inhibin B)、ACT A(Activin A)和FSH(Follicle stimulating hormone)浓度与山羊繁殖力之间的关系,以高繁殖力的大足黑山羊和低繁殖力的萨能奶山羊为研究对象,采用酶联免疫法(ELISA)测定血浆中INH B、ACTA和FSH浓度,比较两个山羊品种在一个发情周期内血浆中INH B、ACTA和FSH的分泌变化规律.研究结果显示:大足黑山羊和萨能奶山羊血浆中FSH的分泌与ACTA呈正相关,与INH B呈负相关,大足黑山羊在整个发情周期内血浆中的FSH平均浓度高于萨能奶山羊,INH B和ACT A平均浓度均低于萨能奶山羊.从发情症状明显至排卵前这段时问内,大足黑山羊血浆中FSH平均浓度显著高于萨能奶山羊(P＜0.05).结果表明,发情周期内INH B、ACT A与FSH的差异可能是导致大足黑山羊和萨能奶山羊繁殖力差异的根本原因之一.推测ACT A主要作用可能是延长卵泡期,对于山羊排卵个数的影响不起主导作用.INHB可以抑制FSH的水平,从而间接的影响排卵数.     

山羊品种间体细胞核移植研究

萨能奶山羊是著名的奶用山羊品种,波尔山羊则是世界著名的肉用山羊品种.为了研究波尔山羊体细胞在奶山羊卵母细胞中的去分化,我们将成年波尔山羊的颗粒细胞或耳皮肤成纤维细胞作为供核细胞(试验组),移入奶山羊中Ⅱ期的去核卵母细胞透明带下,经电融合和离子霉素与6-二甲基氨基嘌呤(6-DMAP)激活,直接移入同期发情奶山羊输卵管或经体内培养,将发育的重构胚移人同期发情羊子宫内.妊娠早期作B超诊断,确立妊娠的观察至足月.同时将奶山羊的35日龄胎儿成纤维细胞作供核细胞(对照组),按试验组同样方法处理,将重构胚直接移入同期发情的奶山羊输卵管内.结果试验组,波尔羊颗粒粒细胞与耳皮肤成纤维细胞的融合率分别为78.2%(115/147)、57.4%(116/202),重构胚卵裂率为85.8%(115/134),桑椹胚、囊胚的发育率38.8%(52/134),早期妊娠三头,分别于妊娠40、60、60日龄终止妊娠.对照组,融合率为89.5%(136/152),早期妊娠率为42.9%(6/14),四头受体足月分娩,产四头公羊羔,其中三头存活,一头分娩时死于肺不扩张,并体重过大,显示胎儿过大综合症.经基因型鉴定证实,这四头克隆羔羊均源于同一胎儿成纤维细胞系.以上结果表明,波尔羊体细胞核在奶山羊卵母细胞中能够去分化,并维持一定程度的发育.     

3个山羊群体中4个微卫星DNA多态性及其与杂种优势的关系

利用4个微卫星标记（OarFCB11,OarAE101,McM218,McM38）对波尔山羊、太行山羊和河北奶山羊的等位基因频率、群体多态信息含量、有效等位基因数、杂合度和遗传距离进行了遗传检测,并测定了波尔山羊与河北奶山羊及太行山羊的杂交效果。结果表明：4个微卫星标记在波尔山羊、太行山羊和河北奶山羊3个品种中存在多态性,可以用于山羊遗传多样性的评估;从不同品种来看,太行山羊的遗传变异程度最大,而波尔山羊的遗传变异程度相对较小;波尔山羊与河北奶山羊的遗传距离大于与太行山羊,波尔山羊与河北奶山羊的杂种优势高于与太行山羊,与实际杂种优势测定结果相符。 Abstract: Gene frequency, polymorphism information contents, number of effective alleles, heterozygosity and genetic distances were studied in Boer goat, Taihang goat and Hebei dairy goat using four microsatellite markers（OarFCB11,OarAE101,McM218,McM38）. The crossing effects on Hebei dairy goat and Taihang goat with Boer goat were tested. The results indicated that there are genetic polymorphisms at four microsatellite markers in three goat breeds. Four microsatellite markers can be used for genetic diversity evaluation in goat breeds. The genetic variability of Taihang goat is the highest, and Boer goat is the lowest in three goat breeds. Genetic distances between Boer goat and Hebei dairy goat is bigger than that between Boer goat and Taihang goat. The heterosis between Boer goat and Hebei dairy goat is higher than that between Boer goat and Taihang goat. It accords with testing results on actual heterosis.     

乌羊和小香羊的RAPD分析

用40条多态引物对乌羊、小香羊、南江黄羊、黑山羊、川东白山羊、波尔山羊和马头山羊7个品种（或群体）进行RAPD分析,其中28条引物扩增出多态性普带,并用于进一步对12只乌羊个体和12只小香羊个体基因组进行扩增。扩增产物以1．5％琼脂糖凝胶（含0．5μg/ml溴化乙锭）电泳分离。Nei氏计算品种间的遗传距离指数和品种内的遗传相似指数。NJ法构建系统聚类图。结果表明：乌羊和川东白山羊间的遗传距离最小,亲缘关系较近,而小香羊与品种间的遗传距离都较大,亲缘关系较远。乌羊群体及小香羊品种都具有一定的遗传稳定性。     

山羊品种间体细胞核移植研究

萨能奶山羊是著名的奶用山羊品种,波尔山羊则是世界著名的肉用山羊品种。为了研究波尔山羊体细胞在奶山羊卵母细胞中的去分化,我们针成年波尔山羊的颗粒细胞或耳皮肤成纤维细胞作为供核细胞（试验组）,移入奶山羊中Ⅱ期的去核卵母细胞透明带下,经电融合和离子霉素与6－二甲基氨基嘌呤－DMAP）激活,直接移入同期发情奶山羊输卵管或经体内培养,将发育的重构胚移入同期发情羊子宫内。妊娠早期作B超诊断,确立妊娠的观察至足月。同时将奶山羊的35日龄胎儿成纤维细胞作供核细胞（对照组）,按试验组同样方法处理,将重构胚直接移入同期发情的奶山羊输卵管内。结果：试验组,波尔羊颗粒粒细胞与耳皮肤成纤维2细胞的融合率分别为78．2％（115／147）,57．4％（116／202）,重构胚卵裂率为85．8％（115／134）,桑椹胚,囊胚的发育率38．8％（52／134）,早期妊娠三头,分别于妊娠40,60,60日龄终止妊娠。对照组,融合率为89．5％（136／152）,早期妊娠率为42．9％（6／14）,四头受体足月分娩,产四头公羊羔,其中三头存活,一头分娩时死于肺不扩张,并体重过大,显示胎儿过大综合症。经基因型鉴定证实,这四头克隆羔羊均源于同一胎儿成纤维细胞系。以上结果表明,波尔羊体细胞核在奶山羊卵母细胞中能够去分化,并维持一定程度的发育。     

贵州地方山羊品种的RAPD分析

用180条引物对黔东南小香羊、贵州白山羊、贵州黑山羊和黔北麻羊4个贵州地方山羊品种(种群),以及南江黄羊和波尔山羊进行RAPD分析,其中27条引物扩增出多态性图谱。这27条引物共扩增出281条带,多态带为115条,平均多态频率为40．92％(范围20％～80％);每条引物平均扩增条带为10．41条(范围4～16条);扩增带分子量在210～2800bp。贵州白山羊与贵州黑山羊之间的遗传距离指数(0．0605)最小,而波尔山羊与其他品种之间的遗传距离指数(0．1059～0．1488)最大。NJ法聚类结果显示,贵州白山羊与贵州黑山羊间的亲缘关系最近,其次为黔北麻羊,而黔东南小香羊与其他3个贵州地方品种的亲缘关系较南江黄羊还远。分析表明,黔东南小香羊在遗传上为一独立的品种;而贵州地方山羊品种间具有较近的亲缘关系,遗传变异较小,具有较高的遗传稳定性。     

Genetic diversity and relationships of 10 Chinese goat breeds in the Middle and Western China

The genetic variability and relationships among 10 Chinese goat breeds (Shannan white goat, Shanbei white cashmere goat, Funiu goat, Huanghuai goat, Taihang goat, Guanzhong dairy goat, Xinong Saanen goat, Zhongwei goat, Tibetan goat and Inner Mongolia cashmere goat) were studied using 20 microsatellite markers. The mean heterozygosity and the mean polymorphism information content (PIC) for the 10 goat breeds varied from 0.7612 to 0.8390 and 0.7293 to 0.8181, respectively. Huanghuai goat demonstrated the highest genetic variability, and Tibetan goat showed the lowest. G_ST index was 0.052. A unweighted pair group method with arithmetic means (UPGMA) diagram obtained based on Nei standard genetic distance displayed some degree of consistency with their geographical locations and production.     

The CSN1S1?N and F alleles identified by PCR-SSCP and their associations with milk yield and composition in Chinese dairy goats

A method was depicted to identify null allele CSN1S1 N and low allele CSN1S1 F of the CSN1S1 gene of goat using PCR-SSCP (polymerase chain reaction-single strand conformation polymorphism). First, primer A was designed to amplify the exon 9 of CSN1S1 gene which produced three genotypes AA, AB, and BB. Among these three genotypes, only AA and AB individuals had a cytosine deletion at exon 9 after DNA sequencing, which cannot be used to identify the N and F alleles. Therefore, primer B was used to amplify intron 14 of CSN1S1 of described AA and AB individuals. Genotypes FF, FN and NN were detected within AA individuals and genotypes FO and NO were detected in the above AB individuals. The frequencies of F and N alleles in 708 samples from Xinong Saanen (XS) and Guanzhong (GZ) dairy goat breeds were 0.1139, 0.0927, and 0.2376, 0.1193, respectively. In 268 XS samples, the individuals with NN genotype contained a significant lower protein content than that of other genotypes (P<0.01). Individuals of FF genotype had significant higher milk yield than that of NO genotype in the first milk lactation of 202 XS individuals (P<0.05). Therefore, the variability at CSN1S1 locus contains enough genetic diversity to be potentially useful in improving the quality and production of milk in Chinese dairy goat breeds.     

Association of IGF-I gene polymorphisms with milk yield and body size in Chinese dairy goats

The association of IGF-I gene polymorphisms with certain traits in 708 individuals of two Chinese dairy-goat breeds (Guanzhong and Xinong Saanen) was investigated. Polymerase chain reaction-single strand conformation polymorphism (PCR-SSCP) and DNA sequencing methods were employed in screening for genetic variation. Two novel mutations were detected in the 5'-flanking region and in intron 4 of IGF-I gene, viz., g.1617 G > A and g.5752 G > C (accession D26119.2), respectively. The associations of the g.1617 G > A mutation with milk yield and the body size were not significant (p > 0.05). However, in the case of g.5752 G > C, Xinong Saanen dairy goats with the CG genotype presented longer bodies (p < 0.05). Chest circumference (p < 0.05) was larger in Guanzhong goats with the GG genotype. In Xinong Saanen dairy goats with the CC genotype, milk yields were significantly higher during the first and second lactations (p < 0.05). Hence, the g.5752 G > C mutation could facilitate association analysis and serve as a genetic marker for Chinese dairy-goat breeding and genetics.     

A novel SNP of α-lactalbumin gene in Chinese dairy goats

The α-lactalbumin (α-LA) plays a key role in lactose synthesis in mammary glands of domestic animals. Mutations in the α-LA gene are associated with the milk traits in dairy cattle. In our study, a novel SNP: NO_X06366: g.875 C > T was detected in 708 dairy goat individuals—268 of the Xinong Saanen breed and 440 of Guanzhong breed, which revealed a synonymous mutation in the exon 1 of α-LA gene. The Polymerase Chain Reaction-Single Strand Conformation Polymorphism (PCR-SSCP) and sequencing techniques showed that there were three genotypes: CC, CT and TT. Moreover, the χ²-test showed that the genotype frequencies of the two breeds were in good agreement with the Hardy-Weinberg equilibrium (P > 0.05). The relationship of the polymorphism of dairy goat α-LA gene with the milk trait and the body size trait was revealed. Individuals with the CC genotype were significantly smaller at chest circumference than those with CT (P < 0.05) in both breeds. But the milk trait and other body size traits of the two dairy goat breeds had no significant association with genotypes studied.     

Polymorphism of bone morphogenetic protein 4 gene and its relationship with litter size of Jining Grey goats

Two pairs of primers (P1 and P2) were designed to detect single nucleotide polymorphisms of exon 2 and intron 2 of bone morphogenetic protein 4 (BMP4) gene in both high fecundity breed (Jining Grey goat) and low fecundity breeds (Boer, Angora and Inner Mongolia Cashmere goats) by single strand conformation polymorphism. Results showed that no polymorphism was detected for exon 2 (primer P1) of BMP4 gene in four goat breeds. For intron 2 (primer P2), three genotypes (AA, AB and BB) were detected in Jining Grey and Inner Mongolia Cashmere goats, two genotypes (AB and BB) in Angora goats, and only one genotype (AA) in Boer goats. Sequencing revealed one mutation (2203G>A) of BMP4 gene in the genotype BB in comparison to the genotype AA. The differences of litter size between AA, AB and BB genotypes were not significant (P > 0.05) in Jining Grey goats. A pair of primer (P3) was designed to detect polymorphism in the 3' flanking region of BMP4 gene that contained dinucleotide repeated sequence (CA) in the four goat breeds by microsatellite analysis. For primer P3, three genotypes (CC, CD and DD) were detected in four goat breeds. Sequencing revealed one more CA dinucleotide in genotype DD than in genotype CC. The Jining Grey does with genotype CC had 0.55 (P < 0.05) or 0.72 (P < 0.05) kids more than those with genotype CD or DD. These results preliminarily indicated that allele C of BMP4 gene is a potential DNA marker for improving litter size in goats.     

Polymorphism identification in the goat KITLG gene and association analysis with litter size

This study reported the analysis of KIT ligand (KITLG) gene polymorphisms in 681 goats of three breeds: Xinong Saanen (SN), Guanzhong (GZ), and Boer (BG). In addition, the study identified three allelic variants: g.769T>C and g.817G>T in SN and GZ breeds, and g.9760G>C in the three goat breeds. The g.769T>C and g.817G>T loci were closely linked (r² > 0.33). All the single nucleotide polymorphism loci were in Hardy–Weinberg disequilibrium (P < 0.05). Significant associations were found for litter size with all three loci. Therefore, these results suggest that the KITLG gene is a strong candidate gene affecting litter size in goats.     

Single-nucleotide polymorphisms g.151435C>T and g.173057T>C in PRLR gene regulated by bta-miR-302a are associated with litter size in goats

Single-nucleotide polymorphisms (SNPs) located at microRNA-binding sites (miR-SNPs) can affect the expression of genes. This study aimed to identify the miR-SNPs associated with litter size. Guanzhong (n = 321) and Boer (n = 191) goat breeds were used to detect SNPs in the caprine prolactin receptor (PRLR) gene by DNA sequencing, primer-introduced restriction analysis-polymerase chain reaction, and polymerase chain reaction-restriction fragment length polymorphism. Three novel SNPs (g.151435C>T, g.151454A>G, and g.173057T>C) were identified in the caprine PRLR gene. Statistical results indicated that the g.151435C>T and g.173057T>C SNPs were significantly associated with litter size in Guanzhong and Boer goat breeds. Further analysis revealed that combinative genotype C6 (TTAACC) was better than the others for litter size in both goat breeds. Furthermore, the PRLR g.173057T>C polymorphism was predicted to regulate the binding activity of bta-miR-302a. Luciferase reporter gene assay confirmed that 173057C to T substitution disrupted the binding site for bta-miR-302a, resulting in the reduced levels of luciferase. Taken together, these findings suggested that bta-miR-302a can influence the expression of PRLR protein by binding with 3′untranslated region, resulting in that the g.173057T>C SNP had significant effects on litter size.     

山羊生长激素基因5调控区的多态性分析

以鲁北白山羊、引进波尔山羊、纯繁波尔山羊以及鲁北白山羊与波尔山羊的杂交一代、回交一代共计274个个体为研究材料,用两对引物分别扩增山羊生长激素(GH)基因5^'区的26－239bp以及225－429bp片段,扩增产物经SSCP分析发现均存在多态性。在26－239bp片段上,波尔山羊及杂交后代以 AA型个体占多数,而鲁北白山羊则BB型个体较多;在225－429bp片段上,所有种群均以 CC型个体较多。对两个片段的纯合型（AA,BB;CC,DD）分别克隆测序发现：（1）26－239bp片段上AA型在第60位发生了C→T的突变,第211位发生碱基C的丢失,（2）225－429bp片段上,DD型存在3处突变,分别为264位由T→C,292位由T→A,372位由C→T。上述结果为首次实验证实山羊生长激素5^'调控区存在序列多态性。