螺旋藻（Spirulina platensis）藻胆体在解离过程中荧光发射光谱和光能传递的研究

对螺旋藻（Ｓｐｉｒｕｌｉｎａｐｌａｔｅｎｓｉｓ）藻胆体在室温和７７Ｋ处于不同浓度磷缓冲溶液和不同解离时间的荧光发射光谱进行了研究。藻胆体在０．９ｍｏｌ／Ｌ磷酸缓冲溶液中,由于没有发生解离,光能传递效率高,在７７Ｋ荧光发射光谱中只有一个峰,位于６８７ｎｍ,属于别藻蓝蛋白－Ｂ。当藻胆体悬浮在０．３ｍｏｌ／Ｌ磷酸缓冲溶液中１分钟,７７Ｋ荧光光谱的主峰出现在６８４ｎｍ．又出现６５５ｎｍ和６６６ｎｍ荧光峰,它们依次属子Ｃ－藻蓝蛋白和别藻蓝蛋白。在２小时;６５５ｎｍ荧先峰成为主峰,６８４ｎｍ荧光峰为次峰,６６６ｎｍ荧光肩消失。这表明Ｃ－藻蓝蛋白所捕获的先能已不能传递给别藻蓝蛋白,但能传给别藻蓝蛋白－Ｂ。我们提出在螺旋藻藻胆体中存在两类Ｃ－藻蓝蛋白,一是与别藻蓝蛋白相连接,另一是与别藻蓝蛋白－Ｂ相连接。     

螺旋藻（Spirulina platensis）藻胆体在解离过程中荧光发射光谱和光能传递的研究

对螺旋藻（Ｓｐｉｒｕｌｉｎａｐｌａｔｅｎｓｉｓ）藻胆体在室温和７７Ｋ处于不同浓度磷缓冲溶液和不同解离时间的荧光发射光谱进行了研究。藻胆体在０．９ｍｏｌ／Ｌ磷酸缓冲溶液中,由于没有发生解离,光能传递效率高,在７７Ｋ荧光发射光谱中只有一个峰,位于６８７ｎｍ,属于别藻蓝蛋白－Ｂ。当藻胆体悬浮在０．３ｍｏｌ／Ｌ磷酸缓冲溶液中１分钟,７７Ｋ荧光光谱的主峰出现在６８４ｎｍ．又出现６５５ｎｍ和６６６ｎｍ荧光峰,它们依次属子Ｃ－藻蓝蛋白和别藻蓝蛋白。在２小时;６５５ｎｍ荧先峰成为主峰,６８４ｎｍ荧光峰为次峰,６６６ｎｍ荧光肩消失。这表明Ｃ－藻蓝蛋白所捕获的先能已不能传递给别藻蓝蛋白,但能传给别藻蓝蛋白－Ｂ。我们提出在螺旋藻藻胆体中存在两类Ｃ－藻蓝蛋白,一是与别藻蓝蛋白相连接,另一是与别藻蓝蛋白－Ｂ相连接。     

铜离子对钝顶螺旋藻完整细胞中光系统Ⅱ活性和藻胆体能量传递的影响

Cu2 抑制钝顶螺旋藻 ( Spirulina platensis)完整细胞中电子传递活性 ( H2 O→ MV) ,并抑制 PS 的放氧活性。低浓度的 Cu2 处理 ,使钝顶螺旋藻细胞中藻蓝蛋白荧光发射峰位置蓝移、发射强度改变 ,表明藻胆体中能量传递发生了变化。Cu2 处理纯化的藻蓝蛋白 ,使其在长波区 ( 61 6— 62 0 nm)吸收减小、荧光发射峰蓝移 ( 64 7nm→ 64 3nm) ;而变藻蓝蛋白不受影响 ,说明 Cu2 选择性作用于藻蓝蛋白。     

从一种富含藻胆蛋白的螺旋藻中大量提取和纯化藻蓝蛋白的研究

采用新鲜藻丝为原料和分段梯度盐析分离纯化钝顶螺旋藻Sp(NS)-90020的藻蓝蛋白（PC）,经羟基磷灰石一次层析,能使提取的PC的纯度大于普遍认可的标准,由于该工艺流程较为简单,适合藻蓝蛋白的大量生产,藻胆蛋白经Sephadex凝胶过滤后的可达电泳纯度标准,经SDS-PAE测得PC,APC的分子量分别约为38.33kD。     

高碘酸钠和戊二醛交联法构建的R-藻红蛋白-C-藻蓝蛋白交联物能量传递效率的比较研究

从单细胞蓝藻钝顶螺旋藻中纯化C-藻蓝蛋白,从海洋红藻多管藻纯化R-藻红蛋白.分别用高碘酸钠氧化法和戊二醛法将二者共价连接为R-藻红蛋白-C-藻蓝蛋白交联物,再用Sephadex G-200柱层析纯化.光谱分析表明,用两种方法构建的共价交联物都可以将激发能从R-藻红蛋白传递到C-藻蓝蛋白.二者相比,高碘酸钠氧化法构建的共价交联物的能量传递效率更高.     

嗜热蓝藻优雅粘囊藻藻胆体的特性和别藻蓝蛋白的亚基组成

研究了优雅粘囊藻藻胆体（ＰＢＳ）的特性。从聚丙烯酰胺凝胶电泳（ＰＡＧＥ）、吸收光谱和二阶导数图谱可证明,它的ＰＢＳ含有一种红色藻胆蛋白,两种Ｃ－藻蓝蛋白和三种别藻蓝蛋白。但是,用ＰＡＧＥ和羟基磷灰石柱层析分离和纯化所得藻胆蛋白,一般仅得到一种Ｃ－ＰＣ和一种亚基组成特殊的别藻蓝蛋白ＡＰＣ。这种ＡＰＣ吸收光谱和荧光发射相同于已报告的ＡＦＣ６６０ｎｍ。但是它的亚基组成是（αα′ββ′）２而不是（α′α２β２β′）Ｌｃ１０或（αβ）３。     

钝顶螺旋藻形态、生长及光合作用对不同波段太阳辐射的响应

为探讨中不同波段的光合有效辐射对钝顶螺旋藻(Arthrospira platensis)形态、生长及光合作用的影响,实验将钝顶螺旋藻D-0083藻液转入带塞的石英管中, 石英管水平置于阳光下并在其上覆盖不同的截止型和带通型滤光片, 以使藻丝接受不同波段的太阳辐射; 并检测其生长、形态与光合活动的变化。结果发现: 所有波段 (320500、395700、510700和610700 nm) 光合有效辐射下的藻丝均螺旋变紧且生物量增加。其中以包含少量紫外辐射A (Ultraviolet-A)的蓝光波段 (320500 nm)和红光波段(600700 nm) 对藻丝形态变化、生长及光合速率的诱发效率较高。在320500、395700、510700和 610700 nm波段上的单位能量光照引起钝顶螺旋藻螺距变化的效率分别为0.070、0.015、0.021、0.045 m/(Wm2)。 波段320500 nm虽然会轻微抑制钝顶螺旋藻D-0083的有效光化学效率(Fv'/Fm')、电子传递速率(ETR)和藻蓝蛋白的荧光发射, 但是却能够有效诱导其藻丝变紧促进生长。此外, 钝顶螺旋藻D-0083的藻丝变紧程度、比生长速率变化与不同波段太阳辐射下藻丝体的光合性能相一致。该研究表明任何波段的光合有效辐射都能使螺旋藻藻丝螺旋变紧并引发生长和光合作用, 其中以蓝光和红光的效率最高。     

葡萄糖和乳糖对钝顶螺旋藻生长和色素含量的影响

葡萄糖和乳糖能促进钝顶螺旋藻生物量的增加,降低叶绿素a和类胡萝卜素含量,但对藻胆蛋白含量的影响不显著。比较而言,乳糖更有利于钝顶螺旋藻混养生物量的提高。     

失活蓝藻的趋光性

将固氮鱼腥藻置于０．５ｍｏｌＫ３ＰＯ４,７％甲醛或３６－３８％甲醛,７０％或９５％乙醇,冰醋酸,或将藻丝悬浮液煮沸或经１５磅１５分高温高压处理之后,藻丝立即变色失活,但仍能向光照方向移动和聚集,此种能力保持１－２周。在１ｍｏｌＮａＯＨ或ＨＣｌ溶液中,此种能力丧失。失活的东湖项圈藻,钝顶螺旋藻和组囊藻也有趋光性。     

嗜热蓝藻优雅粘囊藻藻胆体的特性和别藻蓝蛋白的亚基组成

研究了优雅粘囊藻藻胆体的特性。从聚丙烯酰胺凝胶电泳、吸收光谱和二阶导数图谱可证明,它的ＰＢＳ含有一种红色藻胆蛋,两种Ｃ－藻蓝蛋白和三种别藻蓝蛋白。但是,用ＰＡＧＥ和羟基磷灰石柱层析分离和纯化所得藻胆蛋白,一般仅得到一种Ｃ－ＰＣ和一种亚基组成特殊的别藻蓝蛋白ＡＰＣ。这种ＡＰＣ吸收光谱和荧光发射相同于已报告的ＡＰＣ６６０ｎｍ。但是它的亚基组成是（αα＇ββ＇）２而不是（α＇α２β２β＇）Ｌｃ＾１０或α     

Opioid receptor contributes to ischemic preconditioning through protein kinase C activation in rabbits

Recent studies have reported that protection from ischemic preconditioning (PC) is blocked by the opioid receptor antagonist naloxone (NAL). We tested whether an opioid agonist could mimic PC in the rabbit heart, whether that protection involved protein kinase C (PKC) activation, and whether opioid receptors act in concert with other PKC-coupled receptors. Rabbit hearts were subjected to 30min coronary occlusions and were reperfused for either 3 (in situ) or 2 (in vitro) h. Infarct size was determined by staining with triphenyltetrazolium chloride. In untreated in situ hearts 38.5 ± 1.6% of the risk zone infarcted. PC with 5 min ischemia/10 min reperfusion significantly limited infarction to 12.7 ± 2.9% (p < 0.01). NAL infusion did not modify infarction (39.6 ± 1.6%) in non-PC hearts, but blocked the effect of one cycle of PC (34.4 ± 3.6% infarction). NAL, however, could not block cardioprotection when PC was amplified with 3 cycles of ischemia/reperfusion (9.9 ± 1.4% infarction, p < 0.01 vs. control). Morphine could also mimic ischemic preconditioning, but only at a dose much higher than would be used clinically (3 mg/kg). In isolated hearts pretreatment with morphine (0.3 M) significantly limited infarction to 9.3 ± 1.2% (p < 0.01 vs. 32.0 ± 3.1% in controls). This cardioprotective effect of morphine could be blocked by either the PKC inhibitor chelerythrine (30.4 ± 2.6% infarction) or NAL (34.0 ± 2.6% infarction). Neither chelerythrine nor NAL by itself modified infarction in non-PC hearts. NAL could not block protection from one cycle of PC in isolated hearts indicating that an intact innervation may be required for endogenous opioid production. Thus, opioid receptors, like other PKC-coupled receptors, participate in the triggering PC in the rabbit heart.     

Scanning tunneling microscopy of mercapto-hexyl-oligonucleotides attached to gold.

6-mercapto hexyl-oligonucleotides bind to a gold surface strongly enough to permit imaging by a scanning tunneling microscope (STM). STM images showed worm-like chains that were approximately 12-(A-wide for single-stranded DNA and 20-(A-wide for double-stranded DNA. The chain lengths corresponded to 3.4 +/- 0.4 A per basepair for double-stranded DNA and 2.2 +/- 0.4 A per base for single-stranded DNA. This unexpectedly short length for single-stranded DNA was confirmed using oligomers with both single- and double-stranded regions. When the attachment of the samples was weakened (by imaging in water or scraping with the STM tip) the images changed to pairs of "blobs," apparently reflecting the attachment points of the molecules to the gold surface. Given this interpretation, images of DNA containing a five-base bulge imply that the bulge bends the oligomer by 90 degrees +/- 20 degrees.     

Identification of DNA--cisplatin adducts in a blind trial of in situ scanning tunneling microscopy.

Scanning tunneling microscopy (STM) reveals nanometer scale details of hydrated DNA but the interpretation of the images is controversial because of substrate artifacts and the lack of a theory for image contrast. We demonstrate that we have overcome these problems by identifying five DNA samples by their STM images alone in a blinded trial. The samples were single-stranded and double-stranded DNA with and without covalent modification by the anti-tumor drug cisplatin. The cisplatin adducts were distinguished by substantial kinking at the drug binding site. The oligomers were 20 bases in length, which was too short to permit the kinking angle to be determined with precision. However, models with a 45 degree kink gave a better fit to the images of the duplex adducts than models with a 90 degrees kink. A variety of structures was observed for the single-stranded adducts.     

Protein-mediated exchange of synthetic phosphatidylcholines into synaptosomal membranes

A phosphatidylcholine (PC) exchange protein from bovine liver was used to exchange endogenous synaptosomal membrane PC's with PC's of defined fatty-acid composition from phospholipid vesicles. Up to 50% of the total synaptosomal PC could be exchanged during a 3 h incubation with PC's which were in the liquid-crystalline state at the temperature of incubation (dimyristoyl-, dioleoyl- and dielaidoyl-PC). The biphasic kinetics of the exchange of 14C-labeled 1-palmitoyl-2-oleoyl-PC into isolated synaptic plasma membrane vesicles indicated that the half-time for transbilayer equilibrium of PC in these membranes was about 10 h. Hence, the observed 50% exchange of total synaptosomal PC probably represented nearly complete exchange of PC in the outer face of the synaptosomal plasma membrane. This extensive exchange was accomplished without apparent loss of synaptosomal function, including membrane potential and high-affinity uptake of choline and gamma-aminobutyric acid. PC's in the gel state (dipalmitoyl- and distearoyl-PC) could not be exchanged extensively into the synaptosomal membranes. However, from within gel-state distearoyl-PC liposomes, a trace amount of fluid 1-palmitoyl-2-oleoyl-PC (Tm less than 10 degrees C) could be preferentially exchanged into the synaptosomes at 32 degrees C with little transfer of the saturated PC.     

A scanning tunneling microscopy (STM) investigation of complex formation between cytochrome P450(cam) and putidaredoxin

We have previously reported the scanning tunnelling microscopy (STM) imaging under buffer of the heme monooxygenase cytochrome P450(cam) from Pseudomonas putida [Faraday Discuss. 116 (2000) 1]. We describe here the adsorption and STM imaging under buffer of complexes of a mutant of cytochrome P450(cam), K344C, and wild-type putidaredoxin (Pdx) on gold(111). The images of Pdx on its own on gold(111) are not uniform, presumably due to multiple orientations of protein adsorption because of the presence of five or more cysteines on the protein surface. STM imaging of a 1:1 mixture of P450(cam)-K344C/Pdx showed a regular array of pairs of different-sized proteins 20-25 A apart arranged in rows across the gold(111) surface which we attribute to the P450(cam)/Pdx complex. The images of the pairs are more regular than those of Pdx on its own, probably as a result of complex formation with P450(cam) partly overcoming the heterogeneity of Pdx adsorption. As far as we are aware this is the first report of STM imaging of a protein/protein complex, and the first direct observation of P450(cam)/Pdx complex formation which is a key step in the catalytic cycle of P450(cam) catalysis. The redox centers of the two proteins are ca. 20 A apart, too far for rapid intracomplex electron transfer. Whether the observed complex is competent for electron transfer or physiologically relevant is not known, and further work is in progress to elucidate the protein-protein interaction.     

Structure of immunoglobulin G by scanning tunnelling microscopy

Scanning tunnelling microscopy (STM) has been used to examine the shape of individual immunoglobulin G (IgG) molecules deposited onto a graphite surface. IgG was chosen for this study as it has a well-characterized and distinctive three-dimensional structure. The micrographs clearly reveal the IgG molecule as trilobed, corresponding with the known structural organization of IgG. Comparison of these images with the structure of IgG determined by X-ray crystallography shows that the STM images are consistent with the crystal structure. This illustrates that STM is a valuable technique for examining protein structure, allowing rapid determination of the overall molecular shape that is consistent with more established techniques.     

Real-time bioluminescence imaging of a protein secretory pathway in living mammalian cells using Gaussia luciferase

Using photon counting and charge-coupled device (CCD) cameras, we have applied the method of real-time bioluminescence imaging to investigate protein trafficking in mammalian cells. In the living cells of Chinese hamster ovary and PC12D cells, exocytotic secretion of protein and protein targeting on the cell surface were visualized using the secreted Gaussia luciferase (GLase) as a reporter protein in a minute. After incubation of the cells with luciferin (coelenterazine) for 10min, luciferin was imported into the cells and the vesicle transport network in the cells could be shown by luminescence images of GLase activity. Further, we demonstrate that GLase with a heterologous signal peptide sequence is targeted to the cell surface in neuronally differentiated PC12D cells and luminescence signals could be detected in a few seconds.     

Effect of Environmental Temperatures on Proteome Composition of Salmonella enterica Serovar Typhimurium

Salmonella enterica serovar Typhimurium (STM) is a major cause of gastroenteritis and transmitted by consumption of contaminated food. STM is associated to food originating from animals (pork, chicken, eggs) or plants (vegetables, fruits, nuts, and herbs). Infection of warm-blooded mammalian hosts by STM and the underlying complex regulatory network of virulence gene expression depend on various environmental conditions encountered in hosts. However, less is known about the proteome and possible regulatory networks for gene expression of STM outside the preferred host. Nutritional limitations and changes in temperature are the most obvious stresses outside the native host. Thus, we analyzed the proteome profile of STM grown in rich medium (LB medium) or minimal medium (PCN medium) at temperatures ranging from 8 °C to 37 °C. LB medium mimics the nutritional rich environment inside the host, whereas minimal PCN medium represents nutritional limitations outside the host, found during growth of fresh produce (field conditions). Further, the range of temperatures analyzed reflects conditions within natural hosts (37 °C), room temperature (20 °C), during growth under agricultural conditions (16 °C and 12 °C), and during food storage (8 °C). Implications of altered nutrient availability and growth temperature on STM proteomes were analyzed by HPLC/MS-MS and label-free quantification. Our study provides first insights into the complex adaptation of STM to various environmental temperatures, which allows STM not only to infect mammalian hosts but also to enter new infection routes that have been poorly studied so far. With the present dataset, global virulence factors, their impact on infection routes, and potential anti-infective strategies can now be investigated in detail. Especially, we were able to demonstrate functional flagella at 12 °C growth temperature for STM with an altered motility behavior.     

Response to “Critical Assessment of the Evidence for Striped Nanoparticles”

Stirling et al., (10.1371/journal.pone.0108482) presented an analysis on some of our publications on the formation of stripe-like domains on mixed-ligand coated gold nanoparticles. The authors shed doubts on some of our results however no valid argument is provided against what we have shown since our first publication: scanning tunneling microscopy (STM) images of striped nanoparticles show stripe-like domains that are independent of imaging parameters and in particular of imaging speed. We have consistently ruled out the presence of artifacts by comparing sets of images acquired at different tip speeds, finding invariance of the stipe-like domains. Stirling and co-workers incorrectly analyzed this key control, using a different microscope and imaging conditions that do not compare to ours. We show here data proving that our approach is rigorous. Furthermore, we never solely relied on image analysis to draw our conclusions; we have always used the chemical nature of the particles to assess the veracity of our images. Stirling et al. do not provide any justification for the spacing of the features that we find on nanoparticles: ~1 nm for mixed ligand particles and ~ 0.5 nm for homoligand particles. Hence our two central arguments remain unmodified: independence from imaging parameters and dependence on ligand shell chemical composition. The paper report observations on our STM images; none is a sufficient condition to prove that our images are artifacts. We thoroughly addressed issues related to STM artifacts throughout our microscopy work. Stirling et al. provide guidelines for what they consider good STM images of nanoparticles, such images are indeed present in our literature. They conclude that the evidences we provided to date are insufficient, this is a departure from one of the authors’ previous article which concluded that our images were composed of artifacts. Given that four independent laboratories have reproduced our measurements and that no scientifically rigorous argument is presented to invalidate our STM images, and also given that Stirling et al. do not contest the quality of our recent STM images, we re-affirm that specific binary mixture of ligands spontaneously form features in their ligand shell that we describe as stripe-like domains ~1 nm in width.     

Structural characteristics of the beta-sheet-like human and rat islet amyloid polypeptides as determined by scanning tunneling microscopy

We demonstrate in this work that scanning tunneling microscopy (STM) provides a useful approach to obtaining structural information about human islet amyloid polypeptide (hIAPP) and rat islet amyloid polypeptide (rIAPP) assembly on highly oriented pyrolytic graphite (HOPG) with sub-molecular resolution. The observed hIAPP and rIAPP lamellae consisted of parallel stripes. The STM images of hIAPPs show multiple molecular folding structures, with an average of 11 amino acid residues for the core regions. In addition, the STM images also reveal the assembly characteristics of rIAPP lamellae and may indicate a secondary structural conformation from random coil to beta-sheet-like on the graphite surface.