猪β2-AR基因重组质粒的快速筛选

为建立一种高效快速鉴定重组质粒的实验方法,将猪β2-肾上腺素能受体（β2-AR）基因与pET-32C重组,构建β2-AR基因表达载体pET32CAR,以T7启动子引物和猪β2-肾上腺素能受体基因特异性引物为PCR引物,挑取重组质粒转化单菌落直接进行PCR,产物经电泳发现,5个候选克隆中有3个克隆扩增出了一条约2kb的特异性条带,并且插入方向正确,随机选取其中1个克隆用限制性酶切鉴定以及DNA测序验证PCR筛选的正确性,研究结果表明;在采用PCR方法对重组克隆进行鉴定时,可以直接使用细菌菌落参与反应,而无须提取克隆的DNA,与传统的实验方法相比,筛选的时间缩短至3-4h,大大提高了重组DNA的筛选效率。     

用PCR法直接快速筛查重组阳性克隆

本研究目的是应用PCR法快速筛查插入有苯丙氨酸脱氨酶（PAL）cDNA重组阳性克隆,用于PCR扩增的引物是位于载体pET23b启动子处的T7启动子引物和位于目的基因PALc DNA3’端终止密码TAA处的引物,以灭菌吸头挑一单菌落加PCR体系扩增。结果：在筛查的3个克隆中,有2个阳性克隆,并且插入方向正确,经DNA序列测定得到进一步证实,结果表明,以PCR方法筛查重组阳性克隆,可以简便快速鉴定插入片段的大小和方向,不需提取质粒。     

单菌落PCR法直接快速鉴定重组克隆

利用单菌落PCR法直接筛选含有GFP、LTB-ST外源基因的重组克隆,阳性克隆可以扩增出目的条带,和质粒PCR扩增的结果一致。同时,单菌落PCR法也可应用于重组质粒转化后的农杆菌的筛选,单菌落PCR法的扩增结果和农杆菌液扩增的结果一致。结果表明,单菌落PCR法是一个有效简便的鉴定重组阳性克隆的方法。     

单菌落PCR法直接快速鉴定重组克隆*

利用单菌落PCR法直接筛选含有GFP、LTB-ST外源基因的重组克隆,阳性克隆可以扩增出目的条带,和质粒PCR扩增的结果一致。同时,单菌落PCR法也可应用于重组质粒转化后的农杆菌的筛选,单菌落PCR法的扩增结果和农杆菌液扩增的结果一致。结果表明,单菌落PCR法是一个有效简便的鉴定重组阳性克隆的方法。     

一种简单高效的酵母单菌落 PCR 方法

目的:为快速简便地挑选出酿酒酵母重组克隆,探索建立一种经济、直接、高效的酵母单菌落 PCR 方法.方法:以 Leu2MX6基同重组或重组质粒转化得到的酵母突变菌为材料,分别采用传统的提取基组或质粒的方法、煮沸法及化学试剂处理法等制备 PCR 模板进行重组克隆鉴定,并对6种 PCR 模板制备方法的效果进行比较与分析;对加热提取法进行优化并进行重组子的提取和验证.结果与结论:直接以1 mm2单克隆菌株95℃处理5 min 后的酵母菌落水悬浮液为模板进行单菌落 PCR,是一种简单高效的酵母重组克隆鉴定方法.该方法能弥补传统方法的不足,且简便快速、结果稳定,可作为筛选和鉴定阳性克隆的有效手段.同时,这种单菌落 PCR 法也可应用重组毕赤酵母的阳性克隆筛选.     

利用DREAM设计和同源重组进行一步定点突变

目的：建立基于DREAM设计和同源重组的简便、快速定点突变方法。方法：设计两条包含突变的反向PCR（inverse PCR）引物,使其5'端互补从而产生同源重组,同时使用DREAM设计方案在上述引物中引入限制性内切酶位点以便突变子筛选。用能扩增长片段的高保真耐热 DNA聚合酶扩增全长的质粒DNA,直接转化大肠杆菌。转化到细菌中的全长质粒DNA PCR产物可利用其末端同源序列发生同源重组而环化。利用引入的酶切位点方便地进行突变子的筛选。结果：我们用该方法成功地对长度大于7 kb的质粒进行了定点突变。结论：本定点突变无需任何突变试剂盒和特殊的试剂,只需一步反应即可完成;利用DREAM设计使克隆筛选简便可靠,高保真耐热DNA聚合酶可保证多数突变子克隆不发生意外突变,而该酶扩增长片段的能力使该方法适合于大多数质粒不经亚克隆直接突变。     

结合通用引物快速简便鉴定阳性克隆的PCR方法

通用引物与载体多克隆住点两端序列互补,将目的片段构建入栽体pGEM-T Easy中,利用载体通用引物M13F和M13R结合片段特异引物进行菌液PCR反应.用PCR产物电泳结果来筛选阳性克隆并鉴定目的片段插入方向,同时能有效对短插入片段重组子进行筛选与鉴定.最终以DNA测序结果来验证,与测序结果一致,显示通用引物PCR方法对阳性克隆的筛选和鉴定优于传统酶切和普通PCR鉴定方法,能够弥补传统方法的不足,且简便快速,可作为筛选和鉴定阳性克隆的有效手段.     

猪FGL2基因cDNA末端序列检测及结构分析

检测猪FGL2基因cDNA末端序列并对该基因结构初步分析。α-32P dCTP放射性同位素标记cDNA探针筛选猪基因组DNA文库;cDNA末端快速扩增(rapid amplification of cDNA end,RACE)。以猪正常小肠及心脏组织提取新鲜总RNA,反转录后作为模板,设计基因特异性引物,采用Advantage 2 聚合酶混合物进行PCR扩增;依据猪与人FGL2基因3′端已知同源序列设计PCR上游引物,以人FGL2基因3′末端序列设计下游引物,以猪基因组DNA为模板采用Advantage 2 聚合酶混合物进行PCR反应;PCR载体重组质粒DNA亚克隆扩增。同位素探针未能筛选到特异阳性克隆,RACE反应检测到特异性转录起始位置及第一个转录终止位置,但仍未检测到第二个转录终止位置。猪基因组DNA行PCR扩增成功检测到猪FGL2基因3′末端未知序列及第二个转录终止位置。     

构建定向T载体用于基因克隆和表达

传统的T载体克隆方法需要烦琐的后续步骤来筛选和鉴定重组子,并且无法实现目的基因的定向克隆。为了克服这些问题,本研究在pET-23a(+)的基础上构建了定向T载体pETG,首先通过定点诱变消除pET-23a(+)上的两个BfuⅠ位点得到PET-23aM;设计一对引物在5端各引入一个BfuⅠ位点,下游引物紧邻BfuⅠ位点引入13 bp的部分LacO序列,用该引物从pHBM2002上扩增Prrn-gfp表达盒,插入PET-23aM的NdeⅠ和XhoⅠ位点,得到定向T载体pETG。PCR扩增的目的基因通过下游引物引入7 bp剩余的LacO序列,该基因片段与BfuⅠ酶切制备的定向T载体连接、转化大肠杆菌DH10β感受态细胞,通过补加了X-gal的平板筛选蓝色重组子。质粒酶切和PCR鉴定表明蓝色菌落全部为定向插入的重组子,重组效率100%,利用本方法成功地定向克隆了103个人类肝蛋白编码基因cDNA,克隆过程无需复杂的步骤筛选鉴定重组子。随机选择了其中的8个基因的克隆进行表达,结果显示8个克隆均在大肠杆菌中获得成功表达。该结果表明定向T载体构建成功,并且该载体非常适合基因的克隆和表达。     

一种热激PCR法高效鉴定重组克隆

利用热激PCR法和菌落直接PCR法进行大肠杆菌和农杆菌的鉴定,筛选含有GFP-linker-C-TAPa或wtGPA1-C-TAPa的pCAMBIA2300EC的阳性克隆,比较热激PCR法和菌落直接PCR法的优劣。热激PCR法阳性检出率是100%,菌落直接PCR法阳性检出率是60%左右。热激PCR法是一种快速可靠的鉴定重组阳性克隆的方法。     

Construction and characterization of a cDNA clone containing a portion of the bovine prolactin sequence.

Poly(A)-containing RNA from the bovine anterior pituitary has been used as a template for the enzymatic synthesis of double-stranded cDNA. The resulting double-stranded cDNA was inserted into the Pst I site of pBR322 with the oligo(dG)-oligo(dC) tailing technique and subsequently cloned in E. coli chi 1776. Clones containing sequences complementary to prolactin mRNA were identified by colony hybridization with partially purified prolactin cDNA. A 250 base pair sequence from one prolactin positive clone was extensively characterized and shown to contain the coding information for amino acids 119-192 of authentic bovine prolactin. The recombinant DNA from this clone was covalently attached to diazotized aminocellulose and used to purify prolactin mRNA from a mixture of mRNAs.     

A QuikChange-like method to realize efficient blunt-ended DNA directional cloning and site-directed mutagenesis simultaneously

Here we present a QuikChange-like method to efficiently realize blunt-ended DNA cloning and conveniently introduce a site-directed mutation to recombinant plasmid at the same time. After blunt-ended DNA ligation and transformation, the plasmid DNA mixture is extracted from pooled transformants and directly used as template for PCR amplification with a pair of complementary mutagenic primers. With this method, sam1 gene was inserted into pUC19 vector by blunt-end ligation, and a unique restriction site Spe I was introduced to the recombinant plasmid at the same time. The randomly selected transformants were analyzed by DNA sequencing, and most of the clones were found to have correct sequences. However, no correct construct was found from randomly selected transformants after traditional blunt-ended DNA ligation and transformation.     

Isolation of cis-acting vaccinia virus DNA fragments promoting the expression of herpes simplex virus thymidine kinase by recombinant viruses.

Recombinant TK- vaccinia viruses containing the pBR322 sequence inserted in either orientation within the coding sequence of the viral thymidine kinase gene were constructed. They were characterized by genomic analysis, hybridization studies, reversion to wild-type virus by in vivo recombination, and rescue from their genomes of plasmids which contained all or parts of the pBR322 sequence. TK- cells were infected with one of these recombinant viruses and then transfected with pools of chimeric plasmids composed of a cloned herpes simplex virus thymidine kinase gene which contained upstream inserts of different vaccinia DNA fragments prepared by restriction or sonication. Recombination between homologous pBR322 sequences within infected cells generated selectable recombinant viruses in which expression of the herpes simplex virus thymidine kinase gene was promoted by the upstream vaccinia insert. These viruses were characterized by genomic analysis, hybridization, and in vivo or in vitro phosphorylation of (5-[125I]deoxycytidine as a specific assay for the expressed herpes simplex virus thymidine kinase. Vaccinia DNA inserts were isolated conveniently for transfer to bacteria by rescuing appropriate plasmids from the genome of recombinant viruses. The sequence of 100 nucleotides adjacent to the upstream region of the herpes simplex virus gene was determined in nine different inserts measuring 0.17 to 1.07 kilobase pairs.     

Molecular cloning of DNA complementary to a mouse α-fetoprotein mRNA sequence

DNA complementary to mouse yolk sac messenger RNA has been inserted at the PstI site of the plasmid pBR322 by annealing of the oligo(dG)-tailed plasmid DNA with the oligo(dC)-tailed mouse DNA. Transformation of Escherichia coli strain RRI with this annealed DNA yielded clones bearing recombinant plasmids. The clones were screened for DNA complementary to mouse a-fetoprotein (AFP) messenger RNA sequences by hybridization with a cDNA probe transcribed from an AFP mRNA of over 90% purity. Out of nine plasmids that were isolated and analyzed by restriction mapping, all had homologous insert DNA of various lengths. The plasmid with the longest insert, pAF6, contained 1.65 kb of added DNA, which is about 70% of the AFP mRNA. This clone was positively identified by a hybridization-translation procedure to contain a cDNA sequence for AFP. A restriction map of this clone and the orientation of the message are presented.     

大腹园蛛鞭毛样丝蛋白cDNA克隆

应用RT-PCR技术,从大腹圆蛛（Araneus ventricosus)壶腹腺中扩增出鞭毛样丝蛋白基因（flagelldid-form silk protein gene),经1.5%琼脂糖凝胶电泳分离,WizardPCR Preps DNA Purification System回收后,将其克隆在pGEM-T载体中,经限制性核酸内切酶鉴定和核苷酸序列分析证实,构建的重组擀粒pSF1中含有蜂蛛鞭毛样丝蛋白基因,且含有3个重复序列。     

A bacterial cell that synthesizes a protein containing the antigenic determinants of rat prolactin.

Bacterial minicells containing three different recombinant plasmids with rat prolactin cDNA sequences inserted at the Pst I site of pBR322 via the poly(dG):poly(dC) joining technique were examined for the expression of rat prolactin antigenic determinants. The three prolactin coding sequences were in the same orientation as the coding sequence of the ampicillin-resistance gene of pBR322. The presence of each of the three recombinant plasmids induced some prolactin synthesis by the bacteria as measured by immunoprecipitation with anti-prolactin antisera. About 10% of the protein synthesized from one of the plasmids, prl 3, precipitated with the antisera. These prolactin antigenic determinants were part of a larger fused protein.     

The structure of M6, a recombinant plasmid containing Dictyostelium DNA homologous to actin messenger RNA

The recombinant plasmid M6 contains a DNA sequence from the cellular slime mold Dictyostelium discoideum which hybridizes to actin messenger RNA. The plasmid contains 6 kilobase pairs (kb) of Dictyostelium DNA inserted into a pMB9 vector. Ten cleavage sites for four different restriction enzymes have been mapped. Other work has shown that a central restriction fragment, 1.7 kb in length, contains sequences repeated about fifteen times in the genome, and that this fragment hybridizes to actin mRNA. Heteroduplexes between M6 and pDd actin 2, a chromosomal plasmid which contains two copies of the actin repeated sequence, were used to define the position of this repeat in M6. Two plasmids with inserts of cDNA made from actin mRNA were heteroduplexed to M6 to define the position and orientation of the message complementary region. This orientation was confirmed by inserting the fragment into phage λ and determining which of the separated λ strands was complementary to actin mRNA. An electron microscope technique has been developed for identifying poly(dA) sequences by hybridizing to them dBrU polymers attached to suitable markers. The mapping of the (dA) tracts that occur in the Dictyostelium insert of M6 is described here. The positions of the A:T tracts do not correlate in any simple way with the position of the actin gene sequence.     

Cloning of mouse carbonic anhydrase mRNA and its induction in mouse erythroleukemic cells

Mouse carbonic anhydrase mRNA was detected in poly(A+) RNA of anemic spleens sedimenting as a RNA species at 14 S. Subsequently, poly(A+) RNA (12-16 S) was used as a template for the synthesis of double-stranded cDNA, which was inserted into the PstI site of pBR322 by oligo-dG:dC tailing. A recombinant plasmid containing carbonic anhydrase cDNA was identified by a positive hybridization selection assay and by partial DNA sequencing. Predicted amino acid sequences showed homology with the known sequences of rabbit and human carbonic anhydrase I and II. The clone contained sequences for most of the coding region and 600-700 base pairs at the 3' noncoding region of the mRNA. Hybridization analysis of poly(A+) RNA from uninduced and induced mouse erythroleukemic cells labeled for short and long time periods indicated that induction results in an increase of carbonic anhydrase mRNA in newly synthesized RNA.     

Molecularly cloned c-mos(rat) is biologically active.

A unique rat cellular gene, c-mos(rat), homologous to the transforming sequences, v-mos, of Moloney murine sarcoma virus (M-MSV) was detected by hybridization to a v-mos specific probe. The c-mos(rat) gene was cloned together with its flanking sequences in an 11-kbp EcoRI DNA fragment inserted in vector Charon 4A. Two probes were used to investigate the position and orientation of c-mos(rat) in the clone examined ( D3e ), namely pMSV -31 which contains the sequences specific for the transforming sequences of M-MSV and pCS-1 which harbors 0.5 kbp of 5'-terminal sequences of c-mos(mouse) as well as 0.7 kbp of its flanking sequences. After ligation of a restriction fragment of clone D3e containing c-mos(rat) to a fragment containing the long terminal repeat of M-MSV and transfection of the DNA onto rat cells, we detected foci of transformed cells, thus showing that c-mos(rat) is biologically active. Using DNA framents derived from clone D3e , we studied the conservation of c-mos and of its flanking sequences in several species. c-mos(rat) as well as some of its flanking sequences appeared to be highly conserved in the species studied.