具细菌群体感应抑制活性海洋细菌的筛选鉴定

目的:从海洋环境中筛选对细菌群体感应有抑制作用的活性菌株,为以致病菌群体感应系统为靶点的新型疗法提供新的药用资源。方法:从海水中分离纯化细菌菌株,采用根癌农杆菌平板筛选模型筛选细菌群体感应抑制活性细菌,对筛选出的海洋细菌进行生理生化和16S rDNA序列测定,根据《伯杰氏手册》进行菌种分类鉴定。结果:从217株海洋细菌中筛选出1株能显著抑制细菌群体感应效应的海洋细菌Y2,该海洋细菌具有蜡样芽孢杆菌(Bacillus cereus)的典型特征,其16S rDNA序列与GenBank中蜡样芽孢杆菌16S rDNA的部分序列有100%的同源性。结论:海洋环境中也存在具有抑制细菌群体感应活性的微生物。     

产纤溶酶海洋微生物B5815菌株的筛选及鉴定

采用酪素平板、纤维蛋白平板的初筛和摇瓶复筛的方法从205株海洋微生物中筛选得到4株纤溶酶活性较强的菌株,其中菌株B5815产纤溶酶活性最高,平均达258 IU/mL。通过对菌株B5815的形态特征、生理生化特性的测定及16S rDNA序列分析,综合鉴定其为短小芽胞杆菌（Bacillus pumilus）。     

水产源芽胞杆菌的分离鉴定及生物学功能分析

筛选具有较好生物学功能的芽胞杆菌(Bacillus),用以改善池塘养殖过程饲料等有机物降解、抑制水体中的病原菌,对从健康养殖鱼虾塘水体中分离的菌株,进行生化试验和16S rDNA序列分子鉴定;通过产酶、耐酸、耐高温试验,抑菌试验以及安全性试验研究分离菌株的生物学功能。试验共筛选出8株细菌,经生化试验及16S rDNA序列的分子鉴定,确定菌株ZHX17、ZHX18、ZHX31为贝莱斯芽胞杆菌（Bacillus velezensis）,菌株ZHX14、ZHX15为地衣芽胞杆菌（Bacillus licheniformis）、菌株NSX4、NSX7、NSX9为枯草芽胞杆菌（Bacillus subtilis）。试验结果表明,8株芽胞杆菌均具有较强的耐酸、耐高温特性,其中3株贝莱斯芽胞杆菌具有较强的分泌淀粉酶、纤维素酶、蛋白酶的能力,抑菌效果好于其他5株芽胞杆菌。安全性试验结果表明,8株芽胞杆菌对草鱼、罗非鱼相对安全。8株芽胞杆菌同时具备分泌淀粉酶、纤维素酶和蛋白酶3种胞外酶的能力,其中贝莱斯芽胞杆菌具有较强的病原菌抑菌能力,可以作为病原拮抗益生菌做进一步研究。     

群体感应抑制活性海洋细菌的筛选与鉴定

从黄海青岛海域海洋污泥中分离纯化微生物菌株,然后采用紫色色杆菌(Chromobacterium violaceum) 为指示菌株,检测其代谢产物的群体感应(Quorum sensing) 抑制活性,并对具有抑制功能的细菌菌株进行16S rDNA分子鉴定及生理生化特征分析.结果表明,1株蜡样芽孢杆菌和1株水莱茵海默氏菌具有较强的细菌群体感应抑制活性,分别命名为Bacillus cereus QSI01和Rheinheimera aquimaris QSI02.从海洋环境中筛选的具有细菌群体感应抑制活性的菌株,为以致病菌群体感应系统为靶点的新型药物的研发提供了菌种资源.     

拮抗菌株Kc-t99的鉴定及其抑菌活性研究

通过传统分类与分子生物学技术相结合的方法对从京郊菜园土壤中分离筛选的拮抗菌株Kc-t99进行鉴定,并采用生物测定的方法评价其抑菌活性.结果表明,菌株Kc-t99的形态学特征和生理生化特性与枯草芽孢杆菌基本一致,其16S rDNA序列与GenBank中已鉴定的枯草芽孢杆菌的16S rDNA序列同源性高达98.06%,据此初步确定其为枯草芽孢杆菌.抑菌试验表明该菌株对供试的5种病原真菌和4种细菌均具抑菌活性,其中对甘蓝枯萎病菌、黄瓜角斑病菌和桃褐腐病菌抑制作用显著.     

1株产聚-β-羟基丁酸芽胞杆菌的分离、筛选与鉴定

从浙江省金华市花生地土样中筛选、分离纯化得到1株产聚-β-羟基丁酸编号为PX-95的芽胞杆菌,PHB产量为135.81 mg/L。根据形态特征、生理生化特征初步鉴定为芽胞杆菌属蜡样芽胞杆菌群,16S rDNA序列分析显示PX-95菌株与苏云金芽胞杆菌以及蜡样芽胞杆菌均具有高度同源性,最后采用扩增gyrB（DNA促旋酶B亚单位）基因的方法将其鉴定为苏云金芽胞杆菌（Bacillus thuringiensis）。     

1株枯草芽胞杆菌的鉴定及其弹性蛋白酶结构研究

鉴定弹性蛋白酶产生菌株EL32,确定该酶的基本结构。采用分子生物学、形态学及生理生化性质对菌株EL32进行鉴定;用硫酸铵沉淀、离子交换层析和分子筛层析纯化酶蛋白;借助肽指纹图谱及酶基因克隆技术研究该酶的一级结构;利用同源建模的方法研究该酶的空间结构。菌株EL32的16S rDNA与枯草芽胞杆菌16S rDNA的同源性达到99%,其菌落呈乳白色,其细胞革兰染色阳性,具有芽胞;发酵葡萄糖试验产酸不产气,明胶水解试验呈阳性,能够水解淀粉,V-P反应呈阳性,鉴定为枯草芽胞杆菌。从菌株BL32发酵液中纯化得到了弹性蛋白酶,SDS-PAGE分析显示其分子量为31 ku。用LTQ-MS测定肽指纹图谱表明该弹性蛋白酶是枯草芽胞杆菌蛋白酶subtilisin,该酶的基因和蛋白质序列与枯草芽胞杆菌蛋白酶subtilisin的同源性都高达99%。菌株EL32弹性蛋白酶的三维结构含有6个α-螺旋,7个扭曲的平行β-折叠以及2个反平行的β-折叠,His、Asp和Ser是其活性中心的关键基团。鉴定了1株产弹性蛋白酶的枯草芽胞杆菌,确定了其弹性蛋白酶是蛋白酶subtilisin,为该枯草芽胞杆菌蛋白酶的应用提供了基础。     

芦笋老茎堆肥中嗜热细菌的分离与鉴定

利用稀释涂布法对芦笋老茎堆肥不同发酵阶段6个样品中的嗜热细菌进行分离,并采用16S rDNA序列分析方法对分离得到的菌落形态有明显区别的22株细菌进行鉴定.根据16S rDNA序列分析结果,22株细菌菌株中13株属于芽胞杆菌属(Bacillus),1株属于类芽胞杆菌属(Paenibacillus),4株属于假黄色单胞菌属(Pseudoxanthomonas),1株属于肠杆菌属(Enterobacter),1株属于副球菌属(Paracoccus),1株属于短芽胞杆菌属(Brevibacillus),菌株D-b2在GenBank数据库中未找到与其相似的已知细菌属的序列,分类地位待定.从以上鉴定结果可以看出,芦笋老茎堆肥中的优势嗜热细菌主要是芽胞杆菌(Bacillus spp.)和假黄色单胞菌(Pseudoxanthomonas spp.).     

一株产耐高温β-甘露聚糖酶菌株的筛选鉴定

目的:筛选鉴定一株产耐高温β-甘露聚糖酶的天然菌株。方法:通过形态、生理生化特征及16S rDNA比对,对从水温高于68℃的热泉中分离出的一株产β-甘露聚糖酶细菌进行鉴定。结果:该菌株的最适生长温度为50℃,可在35～80℃条件下生长,确定为一种极端嗜热枯草芽胞杆菌;该菌所产的β-甘露聚糖酶可耐受90℃高温处理。结论:产耐高温β-甘露聚糖酶极端嗜热枯草芽胞杆菌的筛选鉴定,为后续重组耐高温β-甘露聚糖酶的开发奠定了基础。     

深海细菌SHB109的鉴定及其表面活性产物研究

从南海深海海泥中分离得到1株海洋细菌SHB109.采用形态学鉴定方法,并结合16S rDNA序列分析确定其为枯草芽胞杆菌斯皮兹亚仁亚种(Bacillus subtilis subsp.spizizenii).从其发酵液中分离得到3个化合物,通过1 H-NMR,13C-NMR及HR ESI MS光谱分析将它们鉴定为sur...     

啤酒酵母ECM25/YJL201W基因敲除对啤酒风味稳定性的影响

以pUG6为模板, 设计含有与ECM25基因两侧序列同源的长引物, 构建了带有卡那抗性基因(kanMX)破坏盒, 转化啤酒酵母G-03, 获得一株G-03/a转化菌, 遗传稳定性良好, 测序结果证实ECM25基因敲除是成功的。有氧条件下11oC和28oC培养时转化菌G-03/a的胞外谷胱甘肽(GSH)分泌量在对数生长期分别比原菌高21.4%和14.7%。在锥形瓶中连续发酵4代后, 与原菌株相比, 转化菌G-03/a发酵液、成品酒中GSH含量分别提高32.1%和13.8%, 发酵液和成品啤酒SI系数分别提高7.7%和5.3%, 成品啤酒RSV值提高45.0%。EBC管发酵6 d后, 与原菌株相比, 转化菌G-03/a发酵液中GSH含量提高34.0%。转化菌G-03/a与G-03所酿制成品啤酒的常规指标没有显著差别。表明G-03/a是一株具有抗老化能力的优良啤酒酵母, 能够提高啤酒的风味稳定性。     

Influences of ORF1 on the Virulence and Immunogenicity of Actinobacillus pleuropneumoniae

Actinobacillus pleuropneumoniae is a Gram-negative pathogen that causes porcine pleuropneumonia. The pathogenicity of A. pleuropneumoniae is strongly correlated with the production of active repeat-in-toxin (RTX) proteins such as ApxIVA. We evaluated the contribution of a potential ApxIVA activator, ORF1, to the virulence and immunogenicity of A. pleuropneumoniae in pigs. The orf1 gene in A. pleuropneumoniae SLW03 (serovar 1, ΔapxICΔapxIIC) was deleted, producing strain SLW05 (ΔapxICΔapxIICΔorf1). The virulence of strains SLW03 and SLW05 was compared in pigs. Clinical signs and pulmonary lesions induced by strain SLW05 were slighter than that of strain SLW03 (P < 0.05). The immunogenicity and protective efficacy of strains SLW03 and SLW05 were similar. All pigs immunized with strain SLW03 or SLW05 developed high antibody titers against ApxIA, ApxIIA, and ApxIVA before challenge. Two weeks after a second immunization, pigs were challenged intratracheally with either a fully virulent A. pleuropneumoniae serovar 1 or serovar 3 strain. Vaccination with strains SLW03 or SLW05 provided significantly greater protection compared to the negative control (P < 0.01). Immunized pigs displayed significantly fewer clinical signs and lower lung lesion scores than non-immunized pigs. These results suggested that ORF1 plays an important role in the development of ApxIVA toxicity. Furthermore, strain SLW05 is a highly attenuated strain able to induce protective immunity against A. pleuropneumoniae infection.     

苏云金芽胞杆菌G03 spoIVF操纵子敲除对芽胞和晶体形成的影响

spoIVF是一个普遍存在于芽胞杆菌中的操纵子。在枯草芽胞杆菌中,它编码的两个蛋白是芽胞形成所必需的。采用基因重组技术敲除了苏云金芽胞杆菌G03菌株中的spoIVF操纵子,构建了spoIVF缺失株G03(spoIVF-)。研究表明:该突变株丧失了形成芽胞和晶体的能力。lacZ基因与cry1Aa基因的启动子融合表达分析发现:突变株中的cry1Aa基因的活性严重降低。利用载体pSTK携带spoIVF操纵子在突变株中的表达,使突变株部分恢复了产胞和形成杀虫晶体蛋白的能力。这说明spoIVF操纵子是所必需的,同时该操纵子还影响σ^E因子控制的cry1Aa基因表达。     

敲除啤酒酵母 fks1 基因对啤酒酵母自溶性能的影响

以啤酒酵母G-03为模板,扩增得到铜抗性基因(cup 1)和β-葡聚糖合成酶基因(fks 1)。将fks 1连接pMD-18T Vector得到重组质粒pTK,重组质粒pTK和cup1经Bgl Ⅱ、Sal Ⅰ酶切后连接得到重组质粒pKC。Bam HI酶切重组质粒pKC得到以fks 1为整合位点包含cup1的基因片段fks 1::cup1。用此片段转化啤酒酵母工业菌株G-03,通过硫酸铜抗性筛选得到一株啤酒酵母工程菌G-03/C。工程菌连续传代10次后依然能在筛选平板上生长,遗传稳定性良好。主酵结束G-03/C和G-03的辛酸和癸酸含量基本相同。25℃诱导自溶20 d,G-03/C的辛酸、癸酸分别下降57.3%、81.8%,自溶性能减弱。G-03/C的死亡率、双乙酰、浊度及TBA均较原菌有所下降。G-03/C与G-03酿制成品啤酒的常规指标没有较大差别,品评结果表明,G-03/C风味更优。     

滨海盐碱地根际溶磷细菌磷素转化特征

为探讨溶磷细菌对土壤磷素的转化效果,提高黄河三角洲盐碱地土壤肥力。从黄河三角洲盐地碱蓬根际土壤中选取一株高效溶磷细菌RPB03,采用单因子实验,探究不同环境因子对RPB03菌株溶磷效果的影响。结果表明：RPB03菌株为Pantoea vagans,隶属泛菌属。在密闭培养方式下,溶磷菌RPB03菌株在较高的盐度、温度和碱性条件下,溶磷量皆达到300 mg/L以上,溶磷能力良好。盆栽实验结果表明,该菌可有效促进土壤中无效态磷向有效态磷的转化（有效磷含量从0.029 mg/kg提升至0.043 mg/kg）。研究表明,RPB03菌株是一株耐盐碱性较强的高效溶磷细菌,适合在黄河三角洲盐碱地中生存,且其存在对提升黄河三角洲盐碱土壤有效磷含量具有促进作用。     

Biodegradation of Dibenzo-p-dioxin, Dibenzofuran, and Chlorodibenzo-p-dioxins by Pseudomonas veronii PH-03

The dioxin-degrading strain Pseudomonas veronii PH-03 was isolated from contaminated soil by selective enrichment techniques. Strain PH-03 grew on dibenzo-p-dioxin and dibenzofuran as a sole carbon source. Further, 1-chlorodibenzo-p-dioxin, 2-chlorodibenzo-p-dioxin and other dioxin metabolites, salicylic acid, and catechol were also metabolized well. Resting cells of strain PH-03 transformed dibenzo-p-dioxin, dibenzofuran, 2,2',3-trihydroxybiphenyl, and some chlorodioxins to their corresponding metabolic intermediates such as catechol, salicylic acid, 2-hydroxy-(2-hydroxyphenoxy)-6-oxo-2,4-hexadienoic acid, and chlorocatechols. The formation of these metabolites was confirmed by comparison of gas chromatography-mass spectrometry (GC-MS) data with those of authentic compounds. Although we did observe the production of 3,4,5,6-tetrachlorocatechol (3,4,5,6-TECC) from 1,2,3,4-tetrachlorodibenzo-p-dioxin (1,2,3,4-TCDD) with resting cell suspensions of PH-03, growth of strain PH-03 in the presence of 1,2,3,4-TCDD was poor. This result suggests that strain PH-03 is unable to utilize 3,4,5,6-TECC, even at very low concentration (0.01 mM) due to its toxicity. In cell-free extracts of DF-grown cells, 2,2',3-trihydroxybiphenyl dioxygenase, 2-hydroxy-6-oxo-6-phenyl-2,4-hexadienoic acid hydrolase, and catechol-2,3-dioxygense activities were detected. Moreover, the activities of meta-pyrocatechase and 2,2',3-trihydroxybiphenyl dioxygenase from the crude cell-free extracts were inhibited by 3-chlorocatechol. However, no inhibition was observed in intact cells when 3-chlorocatechol was formed as intermediate.     

Identification of a fungus able to secrete enzymes that degrade regenerated cellulose films and analyses of its extracellular hydrolases

The LW03 strain was isolated from Chinese farmland soil and found to be able to secrete certain enzymes degrading regenerated cellulose films at low temperature. The LW03 strain was systematically identified as Rhizopus arrhizus var. arrhizus by morphological, physiological, and molecular methods. Incubation of regenerated cellulose films with the extracted crude enzyme of LW03 was done to measure morphological changes by using scanning electron microscopy. Microscopic observations showed that the morphology of the regenerated cellulose films changed drastically due to enzymatic hydrolysis. The extracellular hydrolases of LW03 strain incubated on bran medium were also assessed. The predominant activity in the crude enzyme was glucoamylase activity, followed by acid proteinase, phytase and pectinase activity. Interestingly, activities of β-glucosidase, endoglucanase, exoglucanase, and cellulase were also observed, but at a much lower extent. Based on initial evidence, the crude enzyme is most likely to contain some new constituents capable of degrading regenerated cellulose films.     

Thermoactive extracellular proteases of <Emphasis Type="Italic">Geobacillus caldoproteolyticus</Emphasis>, sp. nov., from sewage sludge

A proteolytic thermophilic bacterial strain, designated as strain SF03, was isolated from sewage sludge in Singapore. Strain SF03 is a strictly aerobic, Gram stain-positive, catalase-positive, oxidase-positive, and endospore-forming rod. It grows at temperatures ranging from 35 to 65°C, pH ranging from 6.0 to 9.0, and salinities ranging from 0 to 2.5%. Phylogenetic analyses revealed that strain SF03 was most similar to Saccharococcus thermophilus, Geobacillus caldoxylosilyticus, and G. thermoglucosidasius, with 16S rRNA gene sequence identities of 97.6, 97.5 and 97.2%, respectively. Based on taxonomic and 16S rRNA analyses, strain SF03 was named G. caldoproteolyticus sp. nov. Production of extracellular protease from strain SF03 was observed on a basal peptone medium supplemented with different carbon and nitrogen sources. Protease production was repressed by glucose, lactose, and casamino acids but was enhanced by sucrose and NH₄Cl. The cell growth and protease production were significantly improved when strain SF03 was cultivated on a 10% skim-milk culture medium, suggesting that the presence of protein induced the synthesis of protease. The protease produced by strain SF03 remained active over a pH range of 6.0–11.0 and a temperature range of 40–90°C, with an optimal pH of 8.0–9.0 and an optimal temperature of 70–80°C, respectively. The protease was stable over the temperature range of 40–70°C and retained 57 and 38% of its activity at 80 and 90°C, respectively, after 1 h.     

昆虫肠道菌对反枝苋的除草活性筛选及菌株JC-03的初步鉴定

利用平板分离法从多种昆虫肠道中分离出14株昆虫肠道菌,活性筛选表明从大黑金龟子肠道分离出的JC-03菌株粗提物对反枝苋具有较好的除草活性,进一步研究表明其活性物质主要集中在中等极性的乙酸乙酯提取物中。安全性实验表明JC-03菌株粗提物对常见作物(油菜、大豆、西红柿、辣椒)的安全性较高。通过形态学特征观察和5.8S rDNA测序分析,初步确定该菌株为赤霉菌(Gibberella intermedia)。JC-03菌株作为微生物源除草剂值得进一步研究。     

高效降解环己酮的无色杆菌JDM-3-03株的分离和鉴定

目的：分离、鉴定高耐受和高效降解环己酮的菌株。方法：从采自岳阳巴陵石化公司环己酮生产车间总出水口的污泥中,通过逐步驯化筛选环己酮降解菌株;通过形态观察、生理生化特征检测和基于16S rRNA基因序列的系统发育分析对分离到的菌株进行初步鉴定。结果：分离得到一株环己酮降解菌株JDM-3-03,初步鉴定其为无色杆菌Achromobacter insolitus的一个菌株;该菌能以环己酮为惟一碳源,且能耐受5000mg/L的环己酮;当环己酮的质量浓度为2000mg/L时,在温度为30℃、转速为150r/min的条件下,72h内该菌株对环己酮的降解率达到90.17%。结论：菌株JDM-3-03是一株可高效降解环己酮的无色杆菌。