Microsatellite markers for two stifftail ducks: the white‐headed duck,Oxyura leucocephala,and the ruddy duck,O. jamaicensis

Hybridization with a close relative, the North American ruddy duck (Oxyura jamaicensis), is a major problem for the conservation of the endangered white‐headed duck (Oxyura leucocephala). We report the development of 11 microsatellite markers that can facilitate the identification of hybrids as well as the study of the population structure of both species across their distributions. These markers were tested in 63 white‐headed ducks and 50 ruddy ducks and show a larger diversity in the latter species.     

Six polymorphic microsatellite markers for Plantago maritima

Plantago maritima displays an extraordinary variation in breeding system. In northern Europe, the species occurs as either self‐incompatible or self‐compatible, and as unisexual females or co‐sexual hermaphrodites. The isolation of polymorphic codominant markers will provide the necessary tools to investigate the proportion of self‐fertilized seeds and levels of inbreeding depression in natural populations of this species. Isolation of microsatellite loci was achieved using a membrane‐enrichment method for four loci, and a streptavidin‐coated‐beads method for two loci. Primers were designed in microsatellite flanking sequences and were analysed using fluorescent labels.     

From climate change to population change: the need to consider annual life cycles

Detailed studies of organisms' life cycles are important for understanding population response to climate change. However, in general one cannot make strong inference about the overall population response from such studies, unless the full annual cycle of the species in question is covered. Here, we present a theoretical framework for the understanding of population response to climate change. Owing to the combined effects of demography, intraspecific feedback, and a possible use of environmental cues, environmentally induced changes in survival and/or reproduction do not necessarily lead to a straightforward change in population size. This framework can guide our thinking about how abiotic conditions work their way to the population level. More specifically, it can help us to identify mechanisms that need to be examined when predicting population change in response to expected climate change.     

The Threaded Dental Implant as a Reference Object for Image Alignment

This paper presents a method that uses the threaded dental implant as a reference object for the inter-image alignment necessary for digital subtraction radiography. The implant is furthermore used to define a measurement coordinate system and to automate the placement of reference areas used for contrast correction. The method is intended for studies of diffuse bone density changes in the vicinity of the implant. The method is shown to be insensitive to large variations in exposure time and geometry, and is together with the contrast correction method of Ruttimann et at., able to detect clinically invisible simulated bone density changes.     

No evidence for Z‐chromosome rearrangements between the pied flycatcher and the collared flycatcher as judged by gene‐based comparative genetic maps

Revealing the genetic basis of reproductive isolation is fundamental for understanding the speciation process. Chromosome speciation models propose a role for chromosomal rearrangements in promoting the build up of reproductive isolation between diverging populations and empirical data from several animal and plant taxa support these models. The pied flycatcher and the collared flycatcher are two closely related species that probably evolved reproductive isolation during geographical separation in Pleistocene glaciation refugia. Despite the short divergence time and current hybridization, these two species demonstrate a high degree of intrinsic post‐zygotic isolation and previous studies have shown that traits involved in mate choice and hybrid viability map to the Z‐chromosome. Could rearrangements of the Z‐chromosome between the species explain their reproductive isolation? We developed high coverage Z‐chromosome linkage maps for both species, using gene‐based markers and large‐scale SNP genotyping. Best order maps contained 57–62 gene markers with an estimated average density of one every 1–1.5 Mb. We estimated the recombination rates in flycatcher Z‐chromosomes to 1.1–1.3 cM/Mb. A comparison of the maps of the two species revealed extensive co‐linearity with no strong evidence for chromosomal rearrangements. This study does therefore not provide support the idea that sex chromosome rearrangements have caused the relatively strong post‐zygotic reproductive isolation between these two Ficedula species.     

The effect of climate change on partial migration – the blue tit paradox

Climate change has proven to affect various aspects of the migration of birds. In response to milder winters making the habitat more profitable and increasing the survival of residents, the migratory fraction of partially migratory populations has been predicted to decline. We studied the blue tit Parus caeruleus , a common partial migrant in southern Sweden. The numbers migrating at Falsterbo, a migratory passage site in SW Sweden, has increased during the last decades, in parallel with increasing winter and annual temperatures. Migration data from Falsterbo were compared with yearly indices of the size of the breeding population as estimated by the Swedish National Bird Monitoring Programme. Over the study period 1975–2004, also the breeding population has increased in size. The proportion of blue tits migrating each year did not change over the study period, or possibly even increased slightly, which is in contrast to how climate change has been predicted to influence populations containing both migratory and resident individuals. The most important factors determining the intensity of blue tit migration in a given year was the size of an important winter food source, the beech mast crop (more migrants at lower crops) and the size of the breeding population (more migrants at higher densities).     

Six polymorphic microsatellite loci in the Natterjack toad,Bufo calamita

The Natterjack toad, Bufo calamita, is a locally endangered anuran endemic to Europe. It has been used as a model organism in several ecological studies. When studying the genetic structure of marginalized populations of the species, there was a need to involve more loci in the study than those previously published. Here we present the development of six polymorphic microsatellite loci in the Natterjack. The loci will be used for studying population genetic structure and gene flow between populations.     

Eleven polymorphic microsatellite loci in a coral reef fish,Pterapogon kauderni

We describe the isolation and characterization of 11 polymorphic tetranucleotide microsatellite loci from a male mouthbrooding coral reef fish, the Banggai cardinalfish Pterapogon kauderni. In a sample of 37 fish from a natural population, polymorphism at these loci ranged from two to 15 alleles, with expected heterozygosities ranging from 0.107 to 0.928, enabling high‐resolution genetic studies of this coral reef fish.