Isolation and characterization of microsatellites in Pacific white shrimp Penaeus (Litopenaeus) vannamei

Five polymorphic microsatellite loci were characterized for Penaeus (Litopenaeus) vannamei. Loci were isolated using a partial Sau3A1 genomic library by the sequencing of randomly selected clones and by a biotinylated (CT)₁₀ and (GT)₁₀ probes screening procedure. The last strategy resulted in the most useful data. About 40% of the clones showed a previously reported satellite/microsatellite (PVS1), reducing the chance of finding new microsatellite regions. Whereas two of the microsatellite loci with more than 10 alleles will be useful for mating analysis in a breeding program, the others might prove useful for population genetic studies.     

回转式凡纳滨对虾温室集约化养殖池氨化菌与硝化菌数演变状况

研究了回转式凡纳滨对虾温室集约化养殖池中氨化菌与硝化菌的演变状况.在回转式凡纳滨对虾温室集约化养殖试验中,养殖全过程不换水、不用药,利用净水网草片、复合微生物制剂、水循环与水生植物净化水质,适时排污,使养殖水体的微生物指标与水化学指标有效控制在虾生长合适范围内.试验期间,248号池水中主要微生物指标平均值如下：氨化细菌为1080000±2411556 cfu/mL,亚硝化细菌898±1124cfu/mL,硝化细菌为1700±759 cfu/L;250号池水中主要微生物指标平均值如下：氨化细菌为881000±1793815 cfu/mL,亚硝化细菌1306±1550 cfu/mL,硝化细菌为2250±2047 cfu/L.同时,实验表明,利用净水草网片能取得良好的净化水质的效果和具有抗不利环境冲击的能力.利用这种养殖模式和相应的管理,养殖用水得到有效的控制,养殖效果良好.     

Recombinant shrimp (Litopenaeus vannamei) trypsinogen production in Pichia pastoris

Shrimp (Litopenaeus vannamei) trypsinogen has never been isolated from its natural source. To assess the production of L. vannamei trypsinogen, we engineered Pichia pastoris strains and evaluated two culture approaches with three induction culture media, to produce recombinant shrimp trypsinogen for the first time. The trypsinogen II cDNA was fused to the signal sequence of the Saccharomyces cerevisiae alpha mating factor, placed under the control of the P. pastoris AOX1 promoter, and integrated into the genome of P. pastoris host strain GS115. Using standard culture conditions for heterologous gene induction of a GS115 strain in shake flasks, recombinant shrimp trypsinogen was not detected by SDS‐PAGE and Western blot analysis. Growth kinetics revealed a toxicity of recombinant shrimp trypsinogen or its activated form over the cell host. Thus, a different culture approach was tested for the induction step, involving the use of high cell density cultures, a higher frequency of methanol feeding (every 12 h), and a buffered minimal methanol medium supplemented with sorbitol or alanine; alanine supplemented medium was found to be more efficient. After 96 h of induction with alanine supplemented medium, a 29‐kDa band from the cell‐free culture medium was clearly observed by SDS‐PAGE, and confirmed by Western blot to be shrimp trypsinogen, at a concentration of 14 μg/mL. Our results demonstrate that high density cell cultures with alanine in the induction medium allow the production of recombinant shrimp trypsinogen using the P. pastoris expression system, because of improved cell viability and greater stability of the recombinant trypsinogen. © 2009 American Institute of Chemical Engineers Biotechnol. Prog., 2009     

亚热带河口养殖塘沉积物有机碳矿化及其影响因子

亚热带河口的养殖塘是温室气体二氧化碳(CO2)的重要排放源,但其沉积物有机碳矿化动力学特征目前尚未厘清。以我国东南沿海亚热带闽江、木兰溪以及九龙江河口区的6个凡纳滨对虾(Penaeus vannamei)养殖塘为研究对象,对沉积物取样,并进行为期60 d的室内厌氧培养,对养殖塘沉积物CO2累积产量曲线利用一阶动力学模型进行拟合和分析。结果表明:养殖塘沉积物CO2产生期主要发生在培养初期的0~2天,随后迅速降低;潜在碳矿化量(C0)为190.12~480.94μg·g^-1,矿化速率常数(k)为0.17~0.42 d^-1;不同盐度养殖塘沉积物有机碳矿化存在显著性差异,表现为低盐养殖塘C0更高而k更低;孔隙水Cl^-、SO4^2-、DOC和NH4+是影响养殖塘沉积物有机碳矿化的主要环境因子;高盐的凡纳滨对虾养殖塘Cl^-、SO4^2-浓度高于低盐养殖塘,而DOC和NH4+浓度低于低盐养殖塘,因此高盐条件养殖凡纳滨对虾能够有效抑制沉积物的有机碳矿化。     

海洋蛭弧菌的分离鉴定及其对副溶血弧菌的作用

蛭弧菌广泛存在于自然水体, 具有噬菌的特性, 对水体中细菌数量控制具调节作用。以副溶血弧菌为宿主菌, 利用双层琼脂法, 从海洋水体中分离出15株具有噬菌作用的细菌, 对形成噬菌斑能力最强的1株菌株进行特异性16S rDNA扩增, 确认为蛭弧菌, 命名为Bd-M1。Bd-M1对大多数海水养殖动物病原菌有裂解作用, 裂解率在90%(20/22)以上, 模拟水环境实验发现, 蛭弧菌对副溶血弧菌有较强的裂解和净化作用, 102 h内能使副溶血弧菌从3.0′108 CFU/mL下降到8.7×103 CFU/mL。动物实验表明蛭弧菌能有效预防对虾弧菌病的发生, 表明蛭弧菌有望成为水产动物疾病防治的一种有效的生物制剂。     

凡纳滨对虾各月龄性状的主成分与判别分析

为了研究凡纳滨对虾各性状增长规律和判定最佳生长季节凡纳滨对虾的体格与月龄的关系,选择1～6月龄凡纳滨对虾各1000只,选择全长、体长、第一腹节背高、第三腹节背高、第一腹节背宽、头胸甲长和体重共7个性状,进行主成分与判别分析.结果表明:各月龄凡纳滨对虾性状之间均呈现显著的正相关(P<0.01), 其中以全长与体长的相关性最为明显,1月龄凡纳滨对虾体重与形态性状的相关系数较小.各月龄凡纳滨对虾的主成分有所不同,1～2月龄凡纳滨对虾的第一主成分为长度因子,第二主成分为宽度因子,第三主成分为高度因子;3月龄凡纳滨对虾的第一主成分与1～2月龄凡纳滨对虾一致,但第二主成分为高度因子,第三主成分为体重因子;4～6月龄凡纳滨对虾的第一主成分为体重因子,第二主成分为高度因子,第三主成分为宽度因子.1～3月龄凡纳滨对虾形态性状的增长优先于体重, 4～6月龄凡纳滨对虾体重优先于形态性状的增长.错过最佳生长季节的凡纳滨对虾的与体格大小相符的月龄可通过建立的判别式来判断,总的判别准确率为98.98%,其中2～4月龄凡纳滨对虾的判别准确率为100%.     

Isolation and characterization of microsatellite markers from Pacific white shrimp (Litopenaeus vannamei)

We report the development of 11 polymorphic microsatellite loci in pacific white shrimp (Litopenaeus vannamei) using an unenriched genomic library. The number of the alleles ranged from two to 18 and observed hererozygosity ranged from 0.0286 to 0.9429, indicating that these markers will be useful for population studies and mapping in pacific white shrimp. Seven loci were detected deviated from Hardy–Weinberg, caused by deficiency of heterozygote, suggesting population genetic structure across the sampled population. No evidence for linkage disequilibrium was found.     

湛江棕囊藻对南美白对虾虾苗和多种鱼苗的毒性研究

测定了湛江棕囊藻赤潮海水和棕囊藻(Phaeocystis globosa)对南美白对虾(Penaeus vannamei Boone)虾苗、青石斑鱼(Epinephelus awoara)、鲻鱼(Mugil cephalus)和尖吻鲈鱼(Latescal carifer)鱼苗的毒性。结果表明,棕囊藻对虾苗有一定的毒性,24 h LC50为1.0×109 cells L-1,去除囊泡液后的棕囊藻碎片对虾苗毒性较弱,细胞密度为1.0×109 cells L-1时,24 h虾苗的死亡率仅为10%,赤潮海水对虾苗无毒性;棕囊藻囊泡液对青石斑鱼有一定毒性,24 h LC50为囊泡液占海水总体积的10.9%,赤潮海水对青石斑鱼苗无毒性;棕囊藻对尖吻鲈鱼和鲻鱼鱼苗无毒性。     

凡纳滨对虾肠道红杆菌科细菌富集碳源筛选及其定向分离

【目的】红杆菌科(Rhodobacteraceae)细菌为凡纳滨对虾肠道微生物的优势类群,在健康对虾肠道中具有较高的相对丰度,是指示对虾健康的关键类群,探究对虾肠道红杆菌科细菌定向富集和分离方法,可为对虾养殖益生菌菌剂的研发提供基础。【方法】利用16S rRNA基因高通量测序技术研究不同碳源添加对凡纳滨对虾肠道中红杆菌科细菌的富集作用,筛选对红杆菌科细菌有显著富集作用的碳源;利用纯培养技术从红杆菌科细菌富集的样品中定向分离红杆菌科细菌,并对其进行鉴定和遗传多样性分析。【结果】添加短链脂肪酸(乙酸、丙酸、丁酸、戊酸)和碳酸氢钠对红杆菌科细菌有显著富集作用,主要富集到Cribrihabitans、Tritonibacter、Rhodovulum、Ruegeria、Sagittula和Thalassobius属相关菌株;对红杆菌科细菌相对丰度最高的样品进行稀释涂布培养,共分离纯化出303株细菌,分属于2门12科,其中红杆菌科细菌为主导类群共119株,主要包括Tritonibacter (90株)、Phaeobacter (25株)、Sulfitobacter (1株)、Ruegeria (1...