DISENTANGLING THE EFFECTS OF KEY INNOVATIONS ON THE DIVERSIFICATION OF BROMELIOIDEAE (BROMELIACEAE)

The evolution of key innovations, novel traits that promote diversification, is often seen as major driver for the unequal distribution of species richness within the tree of life. In this study, we aim to determine the factors underlying the extraordinary radiation of the subfamily Bromelioideae, one of the most diverse clades among the neotropical plant family Bromeliaceae. Based on an extended molecular phylogenetic data set, we examine the effect of two putative key innovations, that is, the Crassulacean acid metabolism (CAM) and the water‐impounding tank, on speciation and extinction rates. To this aim, we develop a novel Bayesian implementation of the phylogenetic comparative method, binary state speciation and extinction, which enables hypotheses testing by Bayes factors and accommodates the uncertainty on model selection by Bayesian model averaging. Both CAM and tank habit were found to correlate with increased net diversification, thus fulfilling the criteria for key innovations. Our analyses further revealed that CAM photosynthesis is correlated with a twofold increase in speciation rate, whereas the evolution of the tank had primarily an effect on extinction rates that were found five times lower in tank‐forming lineages compared to tank‐less clades. These differences are discussed in the light of biogeography, ecology, and past climate change.     

STEME系统:一种助力体内定向进化的新工具

通过定向进化(directed evolution)可以快速进行蛋白工程改良及重要基因功能研究,以获得新型农艺性状突变体。近期,中国科学院遗传与发育生物学研究所高彩霞团队和李家洋团队合作构建了新型的饱和靶向内源诱变编辑器(saturated targeted endogenous mutagenesis editors, STEMEs),并在植物中实现了基因的定向进化和功能筛选。该系统融合了现有的2种单碱基编辑技术,成功实现在植物体内同时诱导C:G>T:A、A:T>G:C双碱基编辑,通过靶向OsACC羧基转移酶结构域编码序列定向进化出水稻除草剂抗性植株。这种在体内进行基因定向进化的新方法,对于今后农作物重要农艺性状的筛选和功能基因研究具有重要作用。本文对STEME系统的组成、编辑效率和应用原理进行介绍,并与已有的定向进化方法进行比较,为加速作物种质资源创新研究提供参考。     

Improving Energy Efficiency by Five Percent and More per Year?

Reduction of specific energy consumption by 1% to 2% per year is typically what is considered feasible for end-use energy applications. This article tries to answer the question of whether much higher rates, for example 5% and more, are feasible for new equipment, installations, and buildings.
After examining some end-use functions in industry, buildings, and the transport sector, it is concluded that for the foreseeable future—that is, not more than 10 to 20 years into the future—such high rates of reduction of specific energy consumption are indeed possible. For the longer term, no definitive proof is available, but there are also no indications that such high rates could not be maintained.
The effect of the reduction of specific energy consumption on total energy use depends on the growth of energy-using activities and on the replacement rates of capital stock. Taking these into account, it is estimated that for industrialized countries a reduction of absolute total energy use by 50% in 50 years compared with the current levels is possible.
Such a reduction requires a huge effort in innovation; however, the possibilities for stimulating innovation seem not to be exhausted yet.     

DO IMAGE-FORMING EYES PROMOTE EVOLUTIONARY DIVERSIFICATION?

It has been suggested that image-forming eyes promote the evolutionary diversification (measured by species richness) of the groups that possess them. Several different processes could give rise to this effect, including diversifying selection in a new adaptive zone (or zones) and a reduced rate of extinction due to enhanced competitive abilities. I tested the generality of the hypothesis that imaging eyes increase net speciation by comparing extant species numbers of 12 groups that have such eyes (as categorized by Land and Fernald 1992) with those of their cladistic sister groups that lack such organs. Even assuming the published hypotheses of phylogenetic relationships that most favor increased net speciation of visual groups, these comparisons show no significant association between imaging eyes and species richness. Increased activity, as indicated by published accounts of locomotory speed, is significantly associated with the evolution of image-forming eyes. This suggests that a large “visual adaptive zone” might be characterized by relatively high activity. However, when diversity comparisons are limited to eight cases in which the evolution of imaging eyes is associated with increased activity, there is still no significant association between such eyes and species richness. The fossil record indicates that the only visual groups that have undergone major evolutionary radiations evolved imaging eyes early in the history of metazoans (before the Silurian). The radiations of these early groups may have largely filled up niches for visual animals and thus prevented the subsequent proliferation of other groups with image-forming eyes. Alternatively, it may be that image-forming eyes have no exceptional effect on diversification or that their effects are obscured by other factors in the long run.     

TESTING ADAPTIVE RADIATION AND KEY INNOVATION HYPOTHESES IN SPIDERS

We combine statistical and phylogenetic approaches to test the hypothesis that adaptive radiation and key innovation have contributed to the diversity of the order Araneae. The number of unbalanced araneid clades (those whose species numbers differ by 90% or more) exceeds the number predicted by a null Markovian model. The current phylogeny of spider families contains 74 bifurcating nodes, of which 31 are unbalanced. As this is significantly more than the 14.8 expected unbalanced nodes, some of the diversity within the Araneae can be attributed to some deterministic cause (e.g., adaptive radiation). One of the more highly unbalanced (97%) bifurcations divides the orb-weaving spiders into the Deinopoidea and the larger Araneoidea. A simple statistical model shows that the inequality in diversity between the Deinopoidea and the Araneoidea is significant, and that it is associated with the replacement of primitive cribellar capture thread by viscous adhesive thread and a change from a horizontal to a vertical orb-web orientation. These changes improve an orb-web's ability to intercept and retain prey and expand the adaptive zone that orb-weaving spiders can occupy and are, therefore, considered to be “key innovations.”     

Restoration Ecology's silver jubilee: innovation,debate, and creating a future for restoration ecology

At a time when the science and practice of restoration ecology is adapting to ongoing environmental and social change, innovations in both methods and concepts are essential. Encouraging innovation means allowing open debate about alternative approaches that may add to the toolbox available for restoration. Such approaches are usually being examined as additions to, rather than substitutes for, traditional restoration practices. Recent debate has focused on the scope and intent of restoration as defined in documents such as the Society for Ecological Restoration Standards. There is a mismatch between the default aim in the standards of full restoration to a native reference system and the goals of international restoration efforts that have a broader and more functional focus. The next generation of restoration scientists and practitioners will need to navigate these issues to ensure that restoration remains effective and relevant. This will require, amongst other things, ongoing learning, sharing information and insights, humility, objectivity, continuous examination of assumptions, and questioning current practices and perspectives.     

基于创新能力培养的“微生物学”研究型教学模式探索

微生物学是生命科学的重要组成部分。随着科学技术的飞速发展,微生物学教学内容和教学方法都需要不断革新,以满足高素质人才培养的需求。华中农业大学在微生物学教学过程中积极开展基于创新能力培养的教学改革实践,课堂上通过推崇学科名人,弘扬科学精神;关注社会焦点,激发学习兴趣;引入学科前沿,培养创新意识等积极引导学生学习微生物学相关知识。通过翻转课堂、对分课堂,借助"微助教"微信公众平台等改变传统的教学模式与师生互动的方式,突破学生学习的时空局限,加强师生交流。依托农业微生物学国家重点实验室等高水平的科研平台,鼓励学生进入实验室运用微生物学知识开展科研实践,引导学生参加各类竞赛,实现理论知识学习向实践创新能力的转化。总之,学生不仅能够在"微生物学"课堂上牢固地掌握微生物学知识,创新思维也得到锻炼,创新能力显著增强。     

Individual differences in children's innovative problem-solving are not predicted by divergent thinking or executive functions

Recent studies of children''s tool innovation have revealed that there is variation in children''s success in middle-childhood. In two individual differences studies, we sought to identify personal characteristics that might predict success on an innovation task. In Study 1, we found that although measures of divergent thinking were related to each other they did not predict innovation success. In Study 2, we measured executive functioning including: inhibition, working memory, attentional flexibility and ill-structured problem-solving. None of these measures predicted innovation, but, innovation was predicted by children''s performance on a receptive vocabulary scale that may function as a proxy for general intelligence. We did not find evidence that children''s innovation was predicted by specific personal characteristics.     

The coevolution of innovation and technical intelligence in primates

In birds and primates, the frequency of behavioural innovation has been shown to covary with absolute and relative brain size, leading to the suggestion that large brains allow animals to innovate, and/or that selection for innovativeness, together with social learning, may have driven brain enlargement. We examined the relationship between primate brain size and both technical (i.e. tool using) and non-technical innovation, deploying a combination of phylogenetically informed regression and exploratory causal graph analyses. Regression analyses revealed that absolute and relative brain size correlated positively with technical innovation, and exhibited consistently weaker, but still positive, relationships with non-technical innovation. These findings mirror similar results in birds. Our exploratory causal graph analyses suggested that technical innovation shares strong direct relationships with brain size, body size, social learning rate and social group size, whereas non-technical innovation did not exhibit a direct relationship with brain size. Nonetheless, non-technical innovation was linked to brain size indirectly via diet and life-history variables. Our findings support ‘technical intelligence’ hypotheses in linking technical innovation to encephalization in the restricted set of primate lineages where technical innovation has been reported. Our findings also provide support for a broad co-evolving complex of brain, behaviour, life-history, social and dietary variables, providing secondary support for social and ecological intelligence hypotheses. The ability to gain access to difficult-to-extract, but potentially nutrient-rich, resources through tool use may have conferred on some primates adaptive advantages, leading to selection for brain circuitry that underlies technical proficiency.