Purification and biochemical characterization of two extracellular peroxidases from Phanerochaete chrysosporium responsible for lignin biodegradation

Two extracellular peroxidases from Phanerochaete chrysosporium, namely a lignin peroxidase (LiP) and manganese peroxidase (MnP), were purified simultaneously by applying successively, ultrafiltration, ion-exchange and gel filtration chromatography. LiP and MnP have a molecular mass of 36 and 45 kDa, respectively. The optimal pHs for LiP and MnP activities were 3.0 and 4.5, respectively. Both peroxidases showed maximal activity at 30 °C and moderate thermostability. MnP activity was strongly inhibited by Fe²⁺, Zn²⁺, Mg²⁺ and Hg²⁺, and enhanced by Mn²⁺, Ca²⁺ and Cu²⁺. LiP activity was enhanced by Ca²⁺, Na⁺ and Co²⁺ and it was inhibited in the presence of K⁺, Hg⁺, Fe²⁺, Mg²⁺ and high concentrations of Cu²⁺ and Zn²⁺. The K_m and V_max for LiP toward veratryl alcohol as a substrate were 0.10 mM and 15.2 U mg⁻¹, respectively and for MnP toward Mn²⁺, they were respectively 0.03 mM and 25.5 U mg⁻¹. The two peroxidases were also able to break down rice lignin in a small-scale solid state treatment system. Data suggest these two peroxidases may be considered as potential candidates for the development of enzyme-based technologies for lignin degradation.     

Ammonia emissions and biodegradation of organic carbon during sewage sludge composting with different extra carbon sources

Ammonia emissions during composting result in the reduced value of agronomic production and can also pollute the air. To evaluate the influence of various carbon sources on ammonia emissions, six composting experiments were carried out with different amendments of carbon sources (glucose, sucrose and straw powder). The cumulative ammonia volatilizations were reduced from 3.11 g/kg (R6) to 2.46 g/kg (R1), 2.17 g/kg (R2), 2.23 g/kg (R4) and 1.93 g/kg (R5). Compared to the control, no significant difference of ammonia emissions and carbon degradation was observed for the mixture of R3 (3.15 g/kg), which was amended with straw powder alone. The co-addition of sucrose and straw powder led to the lowest ammonia emissions. According to these results, a higher C/N ratio did not necessarily indicate an effective solution for reducing ammonia emissions, and not all readily available carbon compounds were helpful in reducing ammonia emissions. The addition of sucrose promoted the decomposition of organic carbon during the intensive stage of ammonia emissions, and the combination of straw and sucrose prolonged this promotion. Thus, the co-addition of sucrose and straw powder made it possible to reduce ammonia emissions drastically by nitrogen immobilization.     

禁牧条件下不同类型草地群落结构特征

利用幂乘方法则模型探讨了鄂尔多斯3种不同类型草地在禁牧情况下的群落结构特征,包括物种组成、物种多样性、生物量和空间分布规律。结果表明:幂乘方法则在解析鄂尔多斯不同类型草地的空间异质性时具有很好的吻合性;羊草(Leymuschinensis)草地、芨芨草(Achnatherum splendens)草地和油蒿(Artemisia ordosica)灌丛草地均比随机分布呈现了较强的空间异质性,群落整体的空间异质性指数表现为油蒿灌丛草地>羊草草地>芨芨草草地;群落整体的物种多样性指数为油蒿灌丛草地>羊草草地>芨芨草草地;L-样方(50cm×50cm)内的平均物种数和物种多样性指数均表现为羊草草地极显著地高于油蒿灌丛草地,油蒿灌丛草地又极显著地高于芨芨草草地(P<0.001);L-样方内的平均生物量表现为油蒿灌丛草地极显著地高于芨芨草草地(P<0.001),而羊草草地与油蒿灌丛草地以及芨芨草草地之间没有显著性差异;这3种类型的草地其L-样方内的平均生物量和物种多样性指数都随着群落整体空间异质性指数的增大而增大。     

秦岭山地松栎混交林主要木本植物组成及更新特征

采用样方法对秦岭南坡中段松栎混交林主要木本植物组成及天然更新特征进行了研究.结果表明:(1)松栎混交林乔木层物种共计40种,油松、锐齿槲栎和华山松为优势种,重要值分别为35.19％、31.99％和8.12％,漆树、栓皮栎和楝木为亚优势种.(2)更新层木本植物共计87种,其中乔木幼苗34种,占总数的39.08％,灌木物种也有一定优势地位,优势种有锐齿槲栎、悬钩子和菝葜等,高度级较小的更新苗在群落内占有较大比例.(3)优势乔木更新特征不同,锐齿槲栎幼苗和幼树密度显著高于油松和华山松,且锐齿槲栎幼苗密度显著高于其幼树,但油松幼苗与幼树、华山松幼苗与幼树间无明显差异.(4)混交林内锐齿槲栎径级结构呈近似倒“J”形分布,种群稳定;油松和华山松种群均呈近似正态分布,大径级个体群相对稳定,但林下幼树不足.该研究结果提示,松栎混交林下油松和华山松更新不良,这将不利于其长期存留于群落中,虽然锐齿槲栎从幼苗到幼树的发育过程中存在更新障碍,但并未影响其种群整体更新,若无大规模干扰,锐齿槲栎将维持逆“J”型的更新方式并成为松栎混交林群落中的第一优势种.     

Porcine skeletal muscle differentially expressed gene ATP5B: molecular characterization, expression patterns, and association analysis with meat quality traits

The 2-DE/MS-based proteomics approach was used to investigate the differences of porcine skeletal muscle, and ATP5B was identified as one differential expression protein. In the present study, ATP5B gene was further cloned by RT-PCR, the sequence was analyzed using the bioinformatics method, and the mRNA expression was detected by qRT-PCR. Sequence analysis showed that the porcine ATP5B gene contains an ORF encoding 528-amino-acid residues with 49 and 166 nucleotides in the 5′ and 3′ UTRs, respectively. The mRNA of ATP5B was widely expressed in all 14 tissues tested, but especially highly expressed in parorchis and fat. The expression pattern of ATP5B was similar in Large White and Meishan breeds, showing that the expression was upregulated by 3 days after birth and downregulated during postnatal development of skeletal muscle. Comparing the two breeds, the mRNA abundance of ATP5B in Large White was more highly expressed than in Meishan at all developmental stages (P < 0.05). Moreover, a synonymous mutation, G75A in exon 8, was identified and association analysis with the traits of meat quality showed that it was significantly associated with the RLF, FMP, IFR, IMF, and IMW (P < 0.05). These results suggested that ATP5B probably plays a key role in porcine skeletal muscle development and may provide further insight into the molecular mechanisms responsible for breed-specific differences in meat quality.     

Isolation and characterization of endophytic fungi from Camptotheca acuminata

In this study, a total of 161 endophytic fungal isolates from Camptotheca acuminata were obtained and classified to 16 taxa according to morphological and molecular analysis. These taxa were composed of 2 frequent genera (Botryosphaeria and Fusarium) and 14 infrequent groups such as Xylaria, Diaporthe, Rhizopus, Epicoccum, and Preussia, demonstrating that fungal endophytes in C. acuminata were highly abundant and diverse. Antimicrobial activity screening using filter-paper diffusion method showed that 47.6 % of the tested isolates had antimicrobial activity against at least one of the test microorganisms. Screening of fungal endophyte-derived camptothecin analogues by TLC and LC–MS/MS³ demonstrated that a strain Botryosphaeria dothidea, X-4 could produce 9-methoxycamptothecin (9-MCPT) when cultured in Sabouraud’s dextrose broth for 12 days under shake flask and bench-scale fermention conditions. This work showed that the fungal endophytes from C. acuminata could be an alternative source for the production of 9-MCPT and other natural antimicrobial compounds.     

大孔树脂分离纯化“黑金刚”紫马铃薯花青苷工艺研究

以紫色马铃薯"黑金刚"花青苷为原料,采用D101、HDP100A、HDP450A、NK-9、AB-8五种大孔吸附树脂对花青苷的吸附与解析特性进行了比较研究,并在此基础上,采用最佳大孔树脂对花青苷纯化过程中的静态、动态吸附和解析附条件进行了优化研究。结果表明AB-8大孔树脂具有较好的吸附和解析能力,是纯化紫色马铃薯花青苷的最佳树脂,较优纯化条件为:上样液花青苷浓度为0.028mg.g-1,上样液pH=2,洗脱液乙醇浓度为50%,洗脱液pH=1,吸附流速为1mL.min-1,洗脱流速为1mL.min-1。经大孔树脂纯化后,色价值比纯化前提高了7.55倍。     

植物对氨基酸的吸收研究进展

氨基酸在提高植物产量、改善产品品质、增强植株抗逆性、保护生态环境等方面发挥着越来越重要的作用,在农业生产中越来越受到重视。本文简述了氨基酸含量、氨基酸种类和植物种类对植物吸收氨基酸的影响,并对氨基酸营养研究进行展望,以期提高人们对植物氨基酸营养的认识,促进氨基酸在农业中的应用和发展。     

Oxidized Low Density Lipoprotein Induced Caspase-1 Mediated Pyroptotic Cell Death in Macrophages: Implication in Lesion Instability?

Background

Macrophage death in advanced lesion has been confirmed to play an important role in plaque instability. However, the mechanism underlying lesion macrophage death still remains largely unknown.

Methods and Results

Immunohistochemistry showed that caspase-1 activated in advanced lesion and co-located with macrophages and TUNEL positive reaction. In in-vitro experiments showed that ox-LDL induced caspase-1 activation and this activation was required for ox-LDL induced macrophages lysis, IL-1β and IL-18 production as well as DNA fragmentation. Mechanism experiments showed that CD36 and NLRP3/caspase-1/pathway involved in ox-LDL induced macrophage pyroptosis.

Conclusion

Our study here identified a novel cell death, pyroptosis in ox-LDL induced human macrophage, which may be implicated in lesion macrophages death and play an important role in lesion instability.     

Magnetic-Based Fano Resonance by a Trimer with Y-shaped Gap

We introduce a Y-shaped gap into a silver disk to break the structure symmetry which can be looked as a loop-linked structure. Magnetic resonances are excited by incident light when incident electric field is parallel to the trimer plane. Fano resonance is generated by the coupling between bright electric mode and dark magnetic mode. These resonances can be adjusted by tuning the gap size, the radius of trimer, and the position of Y-shaped gap. The extinction cross section of the structure is calculated with the finite element method (FEM). The maximum figure of merit (FOM) is 37.8. Both the magnetic and electric field are greatly enhanced at the Fano dip and the magnetic resonance peak.