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1.
织锦芋螺ο家族芋螺毒素的序列分析   总被引:5,自引:0,他引:5  
为了从织锦芋螺(Conustextile)中尽可能多地分离出ο家族的毒素序列和研究其应用价值,在克隆了织锦芋螺α芋螺毒素的基础上进行了织锦芋螺ο家族芋螺毒素基因的分离工作.从织锦芋螺毒管中提取m RNA,通过RACE(rapid am plification ofcDNA ends,cDNA 末端的快速扩增)-PCR方法扩增获得ο家族芋螺毒素cDNA 片段,并进行克隆和序列分析.从织锦芋螺毒液中获得了6种新的芋螺毒素序列,且毒素序列的成熟肽部分均符合C- C- CC- C- C的保守半胱氨酸框架.这些是新的ο家族芋螺毒素序列,新序列的阐明为进一步研究其生物活性和应用打下了基础.  相似文献   

2.
通过硫酸铵分级沉淀、CM-52阳离子交换层析、HRLC分子排阻层析及FPLCMonoS离子交换层析等步骤,从丝瓜籽中分离到一组分子量为8kD左右的小分子核糖体失活蛋白——LufinS1、LufinS2、LufinS3。末端分析结果表明,它们的N端氨基酸分别为Ala、Pro和Thr。氨基酸序列分析确定了LufinS2的N端9个氨基酸的序列是Pro-Arg-Arg-Gly-Gln-Glu-Ala-Phe-Asp。LufinSs对核糖体的失活机制与天花粉蛋白(TCS)一致,是RNAN-糖苷酶催化型的。它们对无细胞蛋白质生物合成的抑制活性较TCS略强,IC50分别为1.3×10-11、1.0×10-10和6.3×10-11mol/L左右。因此LufinSs有可能开发成免疫毒素的高效“弹头”。  相似文献   

3.
金勇  蒋辉 《生命科学研究》2005,9(3):189-195
芋螺毒素是来源于芋螺的毒液的活性多肽,由于其分子质量小、结构多样、作用靶点广泛、功能专一、组织特异性强等优点,广泛地被用作细胞中各种具有重要生理功能靶点的探针,以及作为新药的先导化合物甚至直接作为新药开发.芋螺可以分为食鱼、食软体动物和食虫3种类型,织锦芋螺是一种分布广泛的食软体动物芋螺.作为毒性最强的芋螺品种之一,织锦芋螺毒素成为食软体动物类芋螺毒素研究的代表.现对20世纪90年代末至今的织锦芋螺毒素方面的研究进行了综述.  相似文献   

4.
凤眼莲(Eichhorniacrassipes)的根分泌物中含有Met等多种氨基酸,其中Met、GABA、Gly、Ala、Asp、Ser、Val和Leu(10-7~10-2mol·L-1)均对凤眼莲的根际肠杆菌属F2(Enterobactersp.F2)细菌有强烈的正趋化作用;Glu、Thr和His(10-7~10-3mol·L-1)也对该菌有一定的正趋化作用;而Lys、Cys、Arg、Tyr、Pro、Asn、Gln、Ile、Phe和Typ则对该菌表现出一定的负趋化作用.对细菌的正趋化作用存在一个趋化物的最适浓度范围.具有正趋化作用的氨基酸在凤眼莲根际的浓度都较高,而具有负趋化作用的浓度则较低,这正是凤眼莲与该根际细菌结合为根际微生态系统的原因之一.  相似文献   

5.
少棘巨蜈蚣(ScolopendrasubspinipesmutilansL.Koch)经95%乙醇脱脂后,再经4℃水冷渗,水提液低温旋转浓缩,冻干,得到的冻干粉先后经过SephadexG-25柱,等电聚焦制备电泳,再经SephadexG-150柱,SephadexG-100柱,最后经HPLC制备得到一个纯的碱性蛋白,命名为SSmp-d.该蛋白经HPLC、超薄等电聚焦电泳检验是均一的.采用HPLC和Protein-PakTM125柱测定其分子量为24.64kD.IEF-HPCE显示其等电点为9.27.氨基酸分析表明SSmp-d含较多的Arg、Lys等碱性氨基酸,另外还含有较多的Ala、Leu.使用蛋白质自动序列分析仪测定了SSmp-dN端的11个氨基酸,序列为NH3+-Asp-Val-Asn-Phe-Arg-Leu-Ser-Gly-Ala-Asp-Pro.  相似文献   

6.
王不留行环肽研究   总被引:9,自引:2,他引:7  
从中药王不留行(Vacariasegetalis)种子中分离并鉴定了4个环肽化合物,分别命名为王不留行环肽A,B,C,D(vaccarinsA,B,C,D),其中王不留行环肽A为新环肽化合物。其结构通过光谱和化学方法分别确定为:vaccarinA——cyclo-(Trp-Ala1-Gly-Val-Ala2),vaccarinB———cyclo-(Pro-Gly-Leu-Ser-Phe1-Ala-Phe2),vaccarinC———cyclo-(Pro1-Gly-Tyr-Val-Pro2-Leu-Trp),vacarinD———cyclo-(Pro-Val1-Trp-Ala-Gly-Val2).  相似文献   

7.
在大肠杆菌TG1 中, 发现了一种与人白介素6 核转录因子mRNA 的3′非翻译区专一结合的蛋白, 其N端氨基酸序列为AlaThrArgIleGluPheHisGlyCyss( ?)Gly。对数据库检索未发现完全同源的蛋白。对于在大肠杆菌中发现真核m RNA专一结合蛋白的意义做了讨论。  相似文献   

8.
在大肠杆菌TG1中,发现了一种与人白介素6核转录因子mRNA的3’非翻译区专一结合的蛋白,其N-端氨基酸序列为Ala-Thr-Arg-Ilu-Phe-His-Gly-Cyss(?)-Gly。对数据库检索未发现完全同源的蛋白。对于在大肠杆菌中发现真核mRNA专一结合蛋白的意义做了讨论。  相似文献   

9.
将猪骨胶原蛋白粗提物用胰蛋白酶水解,经阳离子交换树脂层析,SephadexG-25柱凝胶过滤,以及数次反相高效液相层析,最终获得一具有抑制血管紧张素转换酶(ACE)活性的单一峰值的多肽。其氨基酸组成为Ile,His,Ser,Gly,Ala,Pro,Tyr,Leu,Asp.以Hip-Gly-Gly为底物,在pH为7.1的条件下,此肽对猪肺ACE的I_(50)值为26μmol/L。  相似文献   

10.
一组丝瓜籽小分子核糖体失活蛋白LuffinS的分离,纯化 …   总被引:2,自引:1,他引:1  
通过硫酸铵分级沉淀、CM-52阳离子交换层析、HRLC分子排阻层析及FPLC Mono S离子交换层析等步骤,从丝瓜籽中分离到一组分子量为8kD左右的小分子核糖体失活蛋白-LuffinS1、LuffinS2、LuffinS3。末端分析结果表明,它们的N端氨基酸分别为Ala、Pro和Thr。氨基酸序列分析确定了LuffinS2的N端9个氨基酸的序列是Pro-Arg-Gly-Gln-Ala-Phe-A  相似文献   

11.
The amino acid sequences of both the alpha and beta subunits of human chorionic gonadotropin have been determined. The amino acid sequence of the alpha subunit is: Ala - Asp - Val - Gln - Asp - Cys - Pro - Glu - Cys-10 - Thr - Leu - Gln - Asp - Pro - Phe - Ser - Gln-20 - Pro - Gly - Ala - Pro - Ile - Leu - Gln - Cys - Met - Gly-30 - Cys - Cys - Phe - Ser - Arg - Ala - Tyr - Pro - Thr - Pro-40 - Leu - Arg - Ser - Lys - Lys - Thr - Met - Leu - Val - Gln-50 - Lys - Asn - Val - Thr - Ser - Glu - Ser - Thr - Cys - Cys-60 - Val - Ala - Lys - Ser - Thr - Asn - Arg - Val - Thr - Val-70 - Met - Gly - Gly - Phe - Lys - Val - Glu - Asn - His - Thr-80 - Ala - Cys - His - Cys - Ser - Thr - Cys - Tyr - Tyr - His-90 - Lys - Ser. Oligosaccharide side chains are attached at residues 52 and 78. In the preparations studied approximately 10 and 30% of the chains lack the initial 2 and 3 NH2-terminal residues, respectively. This sequence is almost identical with that of human luteinizing hormone (Sairam, M. R., Papkoff, H., and Li, C. H. (1972) Biochem. Biophys. Res. Commun. 48, 530-537). The amino acid sequence of the beta subunit is: Ser - Lys - Glu - Pro - Leu - Arg - Pro - Arg - Cys - Arg-10 - Pro - Ile - Asn - Ala - Thr - Leu - Ala - Val - Glu - Lys-20 - Glu - Gly - Cys - Pro - Val - Cys - Ile - Thr - Val - Asn-30 - Thr - Thr - Ile - Cys - Ala - Gly - Tyr - Cys - Pro - Thr-40 - Met - Thr - Arg - Val - Leu - Gln - Gly - Val - Leu - Pro-50 - Ala - Leu - Pro - Gin - Val - Val - Cys - Asn - Tyr - Arg-60 - Asp - Val - Arg - Phe - Glu - Ser - Ile - Arg - Leu - Pro-70 - Gly - Cys - Pro - Arg - Gly - Val - Asn - Pro - Val - Val-80 - Ser - Tyr - Ala - Val - Ala - Leu - Ser - Cys - Gln - Cys-90 - Ala - Leu - Cys - Arg - Arg - Ser - Thr - Thr - Asp - Cys-100 - Gly - Gly - Pro - Lys - Asp - His - Pro - Leu - Thr - Cys-110 - Asp - Asp - Pro - Arg - Phe - Gln - Asp - Ser - Ser - Ser - Ser - Lys - Ala - Pro - Pro - Pro - Ser - Leu - Pro - Ser-130 - Pro - Ser - Arg - Leu - Pro - Gly - Pro - Ser - Asp - Thr-140 - Pro - Ile - Leu - Pro - Gln. Oligosaccharide side chains are found at residues 13, 30, 121, 127, 132, and 138. The proteolytic enzyme, thrombin, which appears to cleave a limited number of arginyl bonds, proved helpful in the determination of the beta sequence.  相似文献   

12.
The complete amino acid sequence of the β-subunit of protocatechuate 3,4-dioxygenase was determined. The β-subunit contained four methionine residues. Thus, five peptides were obtained after cleavage of the carboxymethylated β-subunit with cyanogen bromide, and were isolated on Sephadex G-75 column chromatography. The amino acid sequences of the cyanogen bromide peptides were established by characterization of the peptides obtained after digestion with trypsin, chymotrypsin, thermolysin, or Staphylococcus aureus protease. The major sequencing techniques used were automated and manual Edman degradations. The five cyanogen bromide peptides were aligned by means of the amino acid sequences of the peptides containing methionine purified from the tryptic hydrolysate of the carboxymethylated β-subunit. The amino acid sequence of all the 238 residues was as follows: ProAlaGlnAspAsnSerArgPheValIleArgAsp ArgAsnTrpHis ProLysAlaLeuThrPro-Asp — TyrLysThrSerIleAlaArg SerProArgGlnAla LeuValSerIleProGlnSer — IleSerGluThrThrGly ProAsnPheSerHisLeu GlyPheGlyAlaHisAsp-His — AspLeuLeuLeuAsnPheAsn AsnGlyGlyLeu ProIleGlyGluArgIle-Ile — ValAlaGlyArgValValAsp GlnTyrGlyLysPro ValProAsnThrLeuValGluMet — TrpGlnAlaAsnAla GlyGlyArgTyrArg HisLysAsnAspArgTyrLeuAlaPro — LeuAspProAsn PheGlyGlyValGly ArgCysLeuThrAspSerAspGlyTyrTyr — SerPheArg ThrIleLysProGlyPro TyrProTrpArgAsnGlyProAsnAsp — TrpArgProAla HisIleHisPheGlyIle SerGlyProSerIleAlaThr-Lys — LeuIleThrGlnLeuTyr PheGluGlyAspPro LeuIleProMetCysProIleVal — LysSerIleAlaAsn ProGluAlaValGlnGln LeuIleAlaLysLeuAspMetAsnAsn — AlaAsnProMet AsnCysLeuAlaTyr ArgPheAspIleValLeuArgGlyGlnArgLysThrHis PheGluAsnCys. The sequence published earlier in summary form (Iwaki et al., 1979, J. Biochem.86, 1159–1162) contained a few errors which are pointed out in this paper.  相似文献   

13.
The amino acid sequence of a protease inhibitor isolated from the hemolymph of Sarcophaga bullata larvae was determined by tandem mass spectrometry. Homology considerations with respect to other protease inhibitors with known primary structures assisted in the choice of the procedure followed in the sequence determination and in the alignment of the various peptides obtained from specific chemical cleavage at cysteines and enzyme digests of the S. bullata protease inhibitor. The resulting sequence of 57 residues is as follows: Val Asp Lys Ser Ala Cys Leu Gln Pro Lys Glu Val Gly Pro Cys Arg Lys Ser Asp Phe Val Phe Phe Tyr Asn Ala Asp Thr Lys Ala Cys Glu Glu Phe Leu Tyr Gly Gly Cys Arg Gly Asn Asp Asn Arg Phe Asn Thr Lys Glu Glu Cys Glu Lys Leu Cys Leu.  相似文献   

14.
The sequence of 96 amino acid residues from the COOH-terminus of the active subunit of cholera toxin, A1, has been determined as PheAsnValAsnAspVal LeuGlyAlaTyrAlaProHisProAsxGluGlu GluValSerAlaLeuGlyGly IleProTyrSerGluIleTyrGlyTrpTyrArg ValHisPheGlyValLeuAsp GluGluLeuHisArgGlyTyrArgAspArgTyr TyrSerAsnLeuAspIleAla ProAlaAlaAspGlyTyrGlyLeuAlaGlyPhe ProProGluHisArgAlaTrp ArgGluGluProTrpIleHisHisAlaPro ProGlyCysGlyAsnAlaProArg(OH). This is the largest fragment obtained by BrCN cleavage of the subunit A1 (Mr 23,000), and has previously been indicated to contain the active site for the adenylate cyclase-stimulating activity. Unequivocal identification of the COOH-terminal structure was achieved by separation and analysis of the terminal peptide after the specific chemical cleavage at the only cysteine residue in A1 polypeptide. The site of self ADP-ribosylation in the A1 subunit [C. Y. Lai, Q.-C. Xia, and P. T. Salotra (1983) Biochem. Biophys. Res. Commun.116, 341–348] has now been identified as Arg-50 of this peptide, 46 residues removed from the COOH-terminus. The cysteine that forms disulfide bridge to A2 subunit in the holotoxin is at position 91.  相似文献   

15.
We examined the effects of orally administrated amino acids on myfibrillar proteolysis in food-deprived chicks. Plasma N(tau)-methylhistidine concentration, as an index of myofibrillar proteolysis, was decreased by the administration of Glu, Gly, Ala, Leu, Ile, Ser, Thr, Met, Trp, Asn, Gln, Pro, Lys and Arg but not by Asp, Val, Phe, Tyr or His to chicks. Orally administrated Cys was fatal to chicks. These results indicate that oral Glu, Gly, Ala, Leu, Ile, Ser, Thr, Met, Trp, Asn, Gln, Pro, Lys and Arg administration suppressed myofibrillar proteolysis in chicks.  相似文献   

16.
Theil R  Scheit KH 《The EMBO journal》1983,2(7):1159-1163
Analytical ultracentrifugation of highly purified seminalplasmin revealed a molecular mass of 6300. Amino acid analysis of the protein preparation indicated the absence of sulfur-containing amino acids cysteine and methionine. The amino acid sequence of seminalplasmin was determined by manual Edman degradation of peptides obtained by proteolytic enzymes trypsin, chymotrypsin and thermolysin: NH2-Ser Asp Glu Lys Ala Ser Pro Asp Lys His His Arg Phe Ser Leu Ser Arg Tyr Ala Lys Leu Ala Asn Arg Leu Ser Lys Trp Ile Gly Asn Arg Gly Asn Arg Leu Ala Asn Pro Lys Leu Leu Glu Thr Phe Lys Ser Val-COOH. The number of amino acids according to the sequence were 48, the molecular mass 6385. As predicted from the sequence, seminalplasmin very likely contains two α-helical domains in which residues 8-17 and 40-48 are involved. No evidence for the existence of β-sheet structures was obtained. Treatment of seminalplasmin with the above proteases as well as with amino peptidase M and carboxypeptidase Y completely eliminated biological activity.  相似文献   

17.
NH2-terminal sequence analysis was performed on subregions of human plasma fibronectin including 24,000-dalton (24K) DNA-binding, 29,000-dalton (29K) gelatin-binding, and 18,000-dalton (18K) heparin-binding tryptic fragments. These fragments were obtained from fibronectin after extensive trypsin digestion followed by sequential affinity purification on gelatin-Sepharose, heparin-agarose, and DNA-cellulose columns. The gelatin-binding fragment was further purified by gel filtration on Sephadex G-100, and the DNA-binding and heparin-binding fragments were further purified by high-performance liquid chromatography. The 29K fragment had the following NH2-terminal sequence: AlaAlaValTyrGlnProGlnProHisProGlnProPro (Pro)TyrGlyHis HisValThrAsp(His)(Thr)ValValTyrGly(Ser) ?(Ser)?-Lys. The NH2-terminal sequence of a 50K, gelatin-binding, subtilisin fragment by L. I. Gold, A. Garcia-Pardo, B. Prangione, E. C. Franklin, and E. Pearlstein (1979, Proc. Nat. Acad. Sci. USA76, 4803–4807) is identical to positions 3–19 (with the exception of some ambiguity at position 14) of the 29K fragment. These data strongly suggest that the 29K tryptic fragment is included in the 50K subtilisin fragment, and that subtilisin cleaves fibronectin between the Ala2Val3 residues of the 29K tryptic fragment. The 18K heparin-binding fragment had the following NH2-terminal sequence: (Glu)AlaProGlnProHisCysIleSerLysTyrIle LeuTyrTrpAspProLysAsnSerValGly?(Pro) LysGluAla?(Val)(Pro). The 29K gelatin-binding and 18K heparin-binding fragments have proline-rich NH2-terminal sequences suggesting that they may have arisen from protease-sensitive, random coil regions of fibronectin corresponding to interdomain regions preceding macromolecular-binding domains. Both of these fragments contain the identical sequence ProGlnProHis, a sequence which may be repeated in other interdomain regions of fibronectin. The 24K DNA-binding fragment has the following NH2-terminal sequence: SerAspThrValProSerProCysAspLeuGlnPhe ValGluValThrAspVal LysValThrIleMetTrpThrProProGluSerAla ValThrGlyTyrArgVal AspValCysProValAsnLeuProGlyGluHisGly Gln(Cys)LeuProIleSer. The sequence of positions 9–22 are homologous to positions 15–28 of the α chain of DNA-dependent RNA polymerase from Escherichia coli. The homology observed suggests that this stretch of amino acids may be a DNA-binding site.  相似文献   

18.
Tryptic peptides which account for all five cysteinyl residues in ribulosebisphosphate carboxylase/oxygenase from Rhodospirillum rubrum have been purified and sequenced. Collectively, these peptides contain 94 of the approximately 500 amino acid residues per molecule of subunit. Due to one incomplete cleavage at a site for trypsin and two incomplete chymotryptic-like cleavages, eight major radioactive peptides (rather than five as predicted) were recovered from tryptic digests of the enzyme that had been carboxymethylated with [3H]iodoacetate. The established sequences are: GlyTyrThrAlaPheValHisCys1Lys TyrValAspLeuAlaLeuLysGluGluAspLeuIleAla GlyGlyGluHisValLeuCys1AlaTyr AlaGlyTyrGlyTyrValAlaThrAlaAlaHisPheAla AlaGluSerSerThrGlyThrAspValGluValCys1 ThrThrAsxAsxPheThrArg AlaCys1ThrProIleIleSerGlyGlyMetAsnAla LeuArg ProPheAlaGluAlaCys1HisAlaPheTrpLeuGly GlyAsnPheIleLys In these peptides, radioactive carboxymethylcysteinyl residues are denoted with asterisks and the sites of incomplete cleavage with vertical wavy lines. None of the peptides appear homologous with either of two cysteinyl-containing, active-site peptides previously isolated from spinach ribulosebisphosphate carboxylase/oxygenase.  相似文献   

19.
The complete amino acid sequence of Penicillium chrysogenum 152A guanyl-specific RNase has been established using automated Edman degradation of two non-fractionated peptide mixtures produced by tryptic and staphylococcal protease digests of the protein. The RNase contains 102 amino acid residues: His2, Arg3, Asp7, Asn8, Thr5, Ser11, Glu4, Gln2, Pro4, Gly11, Ala13, Cys4, Val8, Ile3, Leu3, Tyr9, Phe5 (Mr 10 747).  相似文献   

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