影响引入微生物根部定殖的因素

从外界引入的各类有益微生物如生防菌（ＢＣＡ）和根际促生菌或增产菌（ＰＧＰＲ,ＹＩＢ）到种子表面随其生根发芽而蔓延或直接到根表沿根分布定殖。外来微生物在根际定殖的过程为与根尖接触,沿根分布,最后在根际建立自己的种群。定殖的位点以ＰＧＰＲ为例,是表皮细胞间隙,或侧根、根毛基部。外来微生物在根际定殖动态变化的原因,由于根际生物的和非生物的因素引起的。生物因子除去外来微生物本身的生理特性,还有根际土著微生     

土壤有益细菌在植物根际竞争定殖的影响因素

在土壤有益微生物应用于生物肥料、生物杀虫剂、植物生长刺激剂和生物处理剂的过程中,根际定殖具有重要作用。细菌在植物根际定殖是一个比较复杂的过程,影响定殖能力的因素也是复杂多样的。本文综述了参与根部竞争定殖的生物因素,包括受细菌遗传控制的某些特性如鞭毛/运动性、趋化性、多糖、位点特异重组酶/菌落阶段变异、NADH脱氢酶,植物根的分泌物和植物种类等;影响微生物根际定殖的非生物因素如土壤类型、土壤特性和土壤温度等,探讨了影响微生物根际定殖的主要研究方向。     

植物根际促生菌（PGPR）的研究与应用前景

植物土传病害难以防治,植物根际促生菌(plant growth—promoting rhizobacteria,PGPR)的深入研究和发展为解决这一难题展现了诱人的前景．PGPR能够高密度地在植物根际定殖,兼有抑制植物病原菌、根际有害微生物,以及促进植物生长并增加作物产量的作用,更重要的是有些PGPR能够诱导植物产生系统抗性(induced systemic resistance,ISR),从而提高植物整体的抗病能力．近20年来,国外这一领域的研究十分活跃,已有很多成功应用的PGPR产品,国内应大力加强基础与应用的研究,并推进其产业化的发展．     

植物根际促生菌促生特性研究进展

根际微生物组是决定农作物健康状况的关键因素之一,也是调节农作物与生物和非生物环境相互作用的重要因素。植物根际促生菌(plant growth-promoting rhizobacteria, PGPR)为农作物宿主提供了多种有益作用,通过化学交流以复杂的方式与农作物、土壤相互作用,进而促进农作物生长。本文综述了PGPR对农作物的促生机制、PGPR与农作物的互作及其在农业实践中的应用,并展望了PGPR在农业实践中应用的发展趋势,以期为今后PGPR的应用和研究提供新的思路和理论支撑。     

植物根际促生菌作用机制研究进展

植物在生长过程中可能会遭受许多生物和非生物因素胁迫,从而降低生物产量. 人们已知一些植物在不同因素的刺激诱导下,能系统化建立抵抗或忍受不利因素的机制,植物根际促生菌（PGPR）就是其中一类能定殖于根系并促进植物生长的细菌.本文对PGPR促生机制进行归纳和总结,系统阐述了诱导体系抗性和诱导体系产生忍耐力两大促生机制.PGPR的作用机制的多样性暗示着其可能在更多的农业生态系统中得到应用.     

植物根际促生细菌定殖研究进展

植物促生菌(plant grwth-promoting bacterium,PGPB)因可有效抑制根际病原菌,促进植物生长,增加作物产量等作用,在农业生产领域展现出巨大前景。以了解植物根际促生细菌的种类,理解定殖相关的促生机制为目的,展示了根际细菌的定殖过程及影响细菌在根部定殖的因素,通过抗生素标记、免疫学方法、外源基因标记等方法进行定殖微生物的检测,以高通量测序技术在根际定殖中的广泛应用为结果,得出结论应从遗传水平上对菌株进行解读,获得植物根际土壤微生物群落多样性,功能基因等研究,这项工作对预测根际促生细菌与植物的交互作用,生物菌剂的田间应用有重要意义,应是植物根际促生细菌今后的研究方向。     

根际促生菌提高水稻对非生物胁迫耐受性的研究进展

随着极端气候的不断出现和环境污染的日益严重,水稻在种植过程中受到了多种非生物胁迫(如干旱、重金属和高盐等),导致生长受到抑制,产量降低。近些年,减缓胁迫影响的技术受到越来越多的关注,根际促生菌(PGPR)作为从根际土壤中筛选出的微生物,可有效降低非生物胁迫对水稻生长的影响。它们不仅能够通过自身的生理特性阻碍重金属迁移,减轻重金属对水稻的毒害作用,还能通过产1-氨基环丙烷-1-羧酸脱氨酶、嗜铁素、植物激素或固氮解磷解钾作用,使水稻在形态或生理等方面发生改变,从而提高对重金属、干旱、高盐等非生物胁迫的耐性,促进其生长。该文介绍了PGPR及其种类,并对非生物胁迫下PGPR提高水稻耐受性的研究进展进行总结,为进一步研究和利用PGPR缓解非生物胁迫对水稻的影响提供参考。     

微生物入侵影响因素研究进展

探明生物入侵的影响因素能够有效防治生物入侵,减少其对生态系统的破坏,但现有的入侵研究主要集中于动植物入侵,对微生物入侵关注较少。本文综述了外来微生物自身属性、入侵地生物和非生物状况以及外来种和土著种之间差异等对微生物入侵的影响,比较了微生物入侵与动植物入侵、微生物定殖之间的差别,提出了今后需要进一步加强的研究内容。外来微生物入侵受其自身种系、形态、大小等特性,入侵地生物多样性、天敌、有效资源等生物或非生物因子,以及外来-本地种谱系距离、生态位差异、相对适应性差异等三方面因素共同影响,但不同因素之间的关联度、交互性及相对贡献仍不清楚。外来微生物入侵过程与动植物入侵过程、微生物定殖过程有诸多类似之处,但同时也存在不少差异。今后,需加强研究外来微生物独特性状(如:持留状态和群体感应等)对其入侵影响,关注微生物进入新环境的存活数量、扩散范围和影响程度,加强利用定殖研究中常用的微生物作为入侵物种验证经典入侵理论,以及注重观察全球变化下外来微生物的入侵趋势和区分微生物在不同入侵阶段的主要影响因素。     

绿色荧光蛋白在微生物根际定殖研究中的应用

农业有益微生物根际定殖能力的强弱决定着其应用效果的好坏,而作为荧光标记分子的GFP被认为是当前用于分子生态学研究中最理想的报告基因,成为近年来研究微生物根际定殖的热点方法.简要介绍GFP的一些特性及其在微生物根际定殖研究中的应用与前景展望.     

烟草根际厚孢轮枝菌生态效应研究*

通过盆栽试验研究生防制剂中厚孢轮枝菌在烤烟K326和云85根际的定殖情况及对根际微生物的影响。结果表明施入生物菌剂2周后厚孢轮枝菌能在烤烟外根际、根表分离到,但在根内不能分离到或分离数极少,在4周、6周时外根际、根表的分离数达到最大,根内分离数仍很少,8周时分离数又减少。制剂处理后烤烟根际细菌、真菌和放线菌数量在2周时明显减少,4周时有所回升,6周和8周时与对照达到平衡。结果表明厚孢轮枝菌可以在烟草外根际、根表定殖,初期对土壤微生物具有一定的抑制作用。     

Survival of genetically modified Pseudomonas fluorescens introduced into subtropical soil microcosms

Abstract A genetically modified strain of Pseudomonas fluorescens and its parent showed grossly similar decline rates following introduction into subtropical clay and sandy soils. In unplanted clay soit at pH 6.9 and 25°C, population densities declined progressively from about 10⁸ to 10³ colony forming units (cfu) g⁻¹ dry soil over 75 days, but in unplanted sandy soil the introduced populations could not be detected after 25 days. In clay soil at pH 8.7 or 4.7, or at environmental temperature, decay rates were enhanced as compared to those at pH 6.9 and 25°C. Counts of introduced strains in clay bulk soil and in rhizosphere and rhizoplane of maize suggested that the introduced bacteria competed well with the native bacteria, and colonized the roots at about 10⁶ cfu g⁻¹ dry root at 25°C, over 20 days. However, rhizoplane colonization was lower at environmental temperature. The decay rate of both strains was slower in planted than in unplanted sandy soil. The population densities in the rhizosphere and rhizoplane in the sandy soil were significantly lower than those in the clay soil. Both introduced strains colonized the maize roots in both soils, using seeds coated with bacteria in 1% carboxymethyl cellulose. Introduced cells were localized at different sites along the roots of plants developing in clay soil, with higher densities in the original (near the seeds) and root hair zones as compared to the intermediate zones. No significant difference was observed between the extent of root colonization of the genetically modified strain and its parent.     

华西雨屏区不同退耕模式细根(包括草根)分解过程中土壤酶动态

采用原状土芯(intact core)法, 探讨了四川洪雅柳江退耕模式——光皮桦(Betula luminifera)与扁穗牛鞭草(Hemarthria compressa)复合模式(HN)、扁穗牛鞭草草地模式(NC)、柳杉(Cryptameria fortunei)人工林模式(LS)、光皮桦人工林模式(H)细根(包括草根)分解过程中土壤酶动态。结果表明: 1) HN下的土壤脲酶、蔗糖酶、酸性磷酸酶活性较大, LS下的土壤脲酶、酸性磷酸酶活性最小, 显著低于其他模式(p < 0.05)。2) HN、NC和LS下的土壤脲酶与细根(包括草根)分解速率显著相关, HN的蔗糖酶、NC的酸性磷酸酶、LS的多酚氧化酶活性与细根(包括草根)分解速率也呈显著正相关关系(p < 0.05)。3) 除H外, 土壤脲酶活性与细根C/N、纤维素绝对含量呈显著负相关关系(p < 0.05); 除NC外, 多酚氧化酶活性与细根纤维素绝对含量呈显著负相关关系。4)土壤脲酶活性与需氧固氮细菌或与真菌数量显著相关, HN下的土壤蔗糖酶活性与细菌和纤维素分解菌数量呈正相关关系, H与NC下的土壤酸性磷酸酶还分别与细菌和纤维素分解菌数量呈正相关关系(p < 0.05)。以上结果显示: 由光皮桦与扁穗牛鞭草不同生活型植物构成的复合模式有利于土壤酶活性的提高; 土壤脲酶活性高低能够反映这几种退耕模式细根(包括草根)分解速率的快慢, 细根(包括草根)的C/N是影响土壤脲酶活性的一个重要因素; 土壤酶活性与土壤真菌、需氧固氮细菌、纤维分解菌及细菌数量有关。     

Biological activity and colonization pattern of the bioluminescence-labeled plant growth-promoting bacterium Kluyvera ascorbata SUD165/26

Kluyvera ascorbata SUD165/26 is a spontaneous siderophore-overproducing mutant of K. ascorbata SUD165, which was previously isolated from nickel-contaminated soil and shown to significantly enhance plant growth in soil contaminated with high levels of heavy metals. To develop a better understanding of the functioning of K. ascorbata SUD165/26 in the environment, and to trace its distribution in the rhizosphere, isolates of this bacterium were labeled with either green fluorescent protein or luciferase. When the plant growth-promoting activities of the labeled strains were assayed and compared with the activities of the unlabeled strain, none of the monitored parameters had changed to any significant extent. When the spatial colonization patterns of the labeled bacteria on canola roots were determined after seed application, it was observed that the bacterium was tightly attached to the surface of both roots and seeds, and formed aggregates. The majority of the bacterial population inhabited the upper two thirds of the roots, with no bacteria detected around the root tips.     

Differences in AM fungal root colonization between populations of perennial Aster species have genetic reasons

We tested the hypothesis whether differences between plant populations in root colonization by arbuscular mycorrhizal (AM) fungi could be caused by genetic differentiation between populations. In addition, we investigated whether the response to AM fungi differs between plants from different populations and if it is affected by the soil in which the plants are cultivated. We used Aster amellus, which occurs in fragmented dry grasslands, as a model species and we studied six different populations from two regions, which varied in soil nutrient concentration.We found significant differences in the degree of mycorrhizal colonization of plant roots between regions in the field. To test if these differences were due to phenotypic plasticity or had a genetic basis, we performed a greenhouse experiment. The results suggested that Aster amellus is an obligate mycotrophic plant species with a high dependency upon mycorrhiza. Plant biomass was affected only by soil, and not by population or the interaction between the population and the soil. Mycorrhizal colonization was significantly affected by all three factors (soil, population, interaction of soil and population). Plants from the population originating from the soil with lower nutrient availability developed more mycorrhiza even when grown in soil with higher nutrient availability. The correspondence between mycorrhizal colonization of plants in the field and in both soils in the pot experiment suggests that the observed differences in root colonization have a genetic basis.     

Effect of Bacteriophage on Colonization of Sugarbeet Roots by Fluorescent Pseudomonas spp

The colonization potential of two fluorescent Pseudomonas strains (M11/4, B2/6) that exhibit antifungal activity in vitro was studied on the roots of sugarbeet plants in a clay loam soil. The cell density of the introduced bacteria declined on the root system over a 16-day test period in nonsterile soil. Strain B2/6 declined at a significantly faster rate compared with M11/4. This loss in viability and difference in colonization ability between M11/4 and B2/6 was not observed in sterile soil. Nutrient deprivation induced by indigenous microorganisms was excluded as a key factor involved in the decline of the introduced bacteria on the basis that strains M11/4 and B2/6 retained viability when subjected to nutrient starvation conditions over a 16-day period. Experiments designed to test whether antagonism by indigenous microorganisms was responsible for the decline in the introduced fluorescent Pseudomonas sp. population revealed the presence of large numbers of bacteriophage in the soil capable of lysing strain B2/6. Reconstitution experiments carried out with sugarbeet seedlings inoculated independently with strains M11/4 and B2/6 and grown in sterile soil to which a soil phage filtrate had been added showed a significant decrease in the viability of strain B2/6 relative to M11/4. Phage antagonistic toward strain B2/6 were detected in 43% of soils taken from the major sugarbeet growing regions of Ireland.     

Interaction between Earthworms and Arbuscular Mycorrhizal Fungi in Plants: A Review

Different kinds of soil animals and microorganisms inhabit the plant rhizosphere, which function closely to plant roots. Of them, arbuscular mycorrhizal fungi (AMF) and earthworms play a critical role in sustaining the soil-plant health. Earthworms and AMF belong to the soil community and are soil beneficial organisms at different trophic levels. Both of them improve soil fertility and structural development, collectively promoting plant growth and nutrient acquisition capacity. Earthworm activities redistribute mycorrhizal fungi spores and give diversified effects on root mycorrhizal fungal colonization. Dual inoculation with both earthworms and AMF strongly magnifies the response on plant growth through increased soil enzyme activities and changes in soil nutrient availability, collectively mitigating the negative effects of heavy metal pollution in plants and soils. This thus enhances phytoremediation and plant disease resistance. This review simply outlines the effects of earthworms and AMF on the soil-plant relationship. The effects of earthworms on root AMF colonization and activities are also analyzed. This paper also summarizes the interaction between earthworms and AMF on plants along with suggested future research.     

Friends and foes: streptomycetes as modulators of plant disease and symbiosis

The ecological role of soil streptomycetes within the plant root environment is currently gaining increased attention. This review describes our recent advances in elucidating the complex interactions between streptomycetes, plants, pathogenic and symbiotic microorganisms. Streptomycetes play diverse roles in plant-associated microbial communities. Some act as biocontrol agents, inhibiting plant interactions with pathogenic organisms. Owing to the antagonistic properties of streptomycetes, they exert a selective pressure on soil microbes, which may not always be for plant benefit. Others promote the formation of symbioses between plant roots and microbes, and this is in part due to their direct positive influence on the symbiotic partner, expressed as, e.g., promotion of hyphal elongation of symbiotic fungi. Recently, streptomycetes have been identified as modulators of plant defence. By repressing plant responses to pathogens they facilitate root colonisation with pathogenic fungi. In contrast, other strains induce local and systemic resistance against pathogens or enhance plant growth. In conclusion, while streptomycetes have a clear potential of acting as biocontrol agents, care has to be taken to avoid strains that select for virulent pathogens or enhance disease development. We argue towards the use of an integrated screening approach in the search for efficient biocontrol agents, including assays on in vitro antagonism, plant growth, and disease suppression.     

植物根际促生菌及丛枝菌根真菌协助植物修复重金属污染土壤的机制

植物修复是一种前景广阔的重金属污染土壤的主要修复技术,在微生物的协助下效果更为显著。植物根际促生菌可通过分泌吲哚-3-乙酸(IAA)、产铁载体、固氮溶磷等方式促进植物生长、改善植物重金属耐受性,从而有效提高重金属污染土壤的植物修复效率。菌根真菌是土壤-植物系统中重要的功能菌群之一,可侵染植物根系改变根系形态和矿质营养状况,通过菌丝体吸附重金属,也可产生球囊霉素、有机酸、植物生长素等次生代谢产物改变重金属生物有效性。植物根际促生菌与丛枝菌根真菌可对植物产生协同促生作用,在重金属污染土壤修复中具有一定应用潜力。目前,国内外关于植物根际促生菌和丛枝菌根真菌互作已有大量研究,而二者的相互作用机理仍处于探索阶段。本文综述了近年来国内外植物根际促生菌和丛枝菌根真菌在重金属污染土壤植物修复中的作用机制,并对其研究前景进行展望。     

Colonization behavior of bacterium Burkholderia cepacia inside the Oryza sativa roots visualized using green fluorescent protein reporter

Colonization behavior of endophytic bacteria Burkholderia cepacia strains RRE-3 and RRE-5 was studied in the seedlings of rice variety NDR97 using confocal laser scanning microscopy under controlled laboratory and greenhouse conditions. For studying colonization pattern, bacterial strains were tagged with pHRGFPGUS plasmid. The role of bacterial strains (both gfp/gus-tagged and untagged) in growth promotion was also studied. After coming into contact with the host root system the bacteria showed an irregular spreading. Dense colonization was observed on the primary and secondary roots and also on the junction of emergence of the lateral roots. Results showed that the colonization pattern of Burkholderia cepacia strains was similar to that of other endophytic bacteria isolated from non-legumes. Burkholderia cepacia got entry inside the root at the sites of emergence of lateral roots, without formation of infection threads as in the case of symbiotic rhizobacteria. Observations suggested that the endophytic bacterial strains RRE-3 and RRE-5 entered inside the rice roots in a progressive manner. Bacteria were found to line up along the intercellular spaces of adjoining epidermal cells adjacent to the lateral root junction, indicating endophytic colonization pattern of Burkholderia cepacia strains. Experiments with the rice seedlings inoculated with RRE-3 and RRE-5 strains revealed that both strains enhanced plant growth considerably when observed under laboratory and greenhouse conditions and produced significantly higher plant biomass. No considerable difference was observed between the gfp/gus-tagged and non-gfp/gus-tagged strains in the plant growth experiments both in the laboratory and greenhouse conditions.     

Burkholderia sp. SCMS54 reduces cadmium toxicity and promotes growth in tomato

Cadmium (Cd) can enter soil through the use of fertilisers, calcareous, pesticides and industrial and/or domestic effluents. Cd can leach into groundwater and be taken up by plants, potentially leading to reductions in plant growth and yield. In soil, plant roots interact with heavy metal (HM)‐tolerant microorganisms that may promote plant growth. Soil microorganisms may also be able to solubilise or mobilise soil metals, thereby acting as bioremediators. A better understanding of the interaction among plants, metals, microorganisms and soil will lead to improved plant tolerance. Two multi‐tolerant bacteria from the Burkholderia genus were isolated from Cd‐contaminated and Cd‐uncontaminated soil of a coffee plantation. In addition to its high tolerance to Cd, the strain SCMS54 produces indole‐acetic acid (IAA), solubilises inorganic phosphate and produces siderophores, demonstrating its potential to contribute to beneficial plant–microorganism interactions. When interacting with tomato plants exposed to Cd, the bacterium led to decreases in plant peroxide and chlorosis levels, promoted relative plant growth and decreased the root absorption of Cd, resulting in increased plant tolerance to this highly toxic HM. The results indicated that the inoculation of tomato plants with Burkholderia sp. SCMS54 promotes better growth in plants cultivated in the presence of Cd. This phenomenon appears to be attributed to a mechanism that decreases Cd concentrations in the roots via a beneficial interaction between the bacteria and the plant roots.