山东大豆种质资源形态多样性分析

通过对山东省205份大豆种质资源的形态多样性分析,结果表明主茎节数的形态多样性指数最高,为1．96;花色的遗传多样性指数最低,为0．63。总体上是数量性状形态多样性指数大于质量性状。通过主成分分析,第一主成分的方差贡献率为36．49％,第二主成分的方差贡献率为13,24％;基于形态性状的聚类分析把205份材料聚为3类,其中第1类149份材料,品种生育日数较短,株高低,主茎节数和分枝数均少于其他2类。第2类54份材料,品种生育日数稍长,单株荚数、单株粒数较多,株高较高,百粒重较小。第3类仅2份材料,分别来自第Ⅳ生态区和第Ⅴ生态区。这2个品种生育期较长,株高较高。百粒重较大。     

紫花苜蓿种质资源表型性状与品质多样性分析

旨在利用形态指标、农艺指标和品质性状指标探讨引进紫花苜蓿( M.sativa.)种质资源遗传多样性,为紫花苜蓿品种改良和选择亲本提供科学依据。研究了不同地理来源的75份紫花苜蓿种质资源的21项指标,利用主成分分析和聚类方法,了解其多样性。结果表明：不同紫花苜蓿种质的各特征存在广泛变异,农艺性状变异最大,随后是形态性状和品质性状;主成分分析结果显示前八个主成分累计贡献率达到82.77%,其中茎秆干重、叶干重、单株鲜重、单株干重4个性状是造成紫花苜蓿种质表型差异的主要因素;以21个性状为基础的聚类分析将所研究的75份种质材料分为5类。     

不结球白菜Ty1-copia类逆转座子序列的克隆及表达

参照Ty1-copia类逆转座子逆转录酶的保守区设计简并引物,分别从10个不结球白菜(Brassica campestris ssp.chinensis)品种的全基因组中均扩增出260 bp左右的目标条带. 将目的条带回收、克隆和测序后进行分析,DNAstar分析发现,这些序列存在高度的异质性,28个核苷酸序列变化范围为224～278 bp,同源性范围为16.7%～83.0%.28条序列通过核苷酸聚类分为8个家族.推导氨基酸序列有移框突变、终止子突变或二者兼有;与已登录的不同物种同一类型逆转录酶氨基酸系统进化树分析表明,不结球白菜Ty1-copia类逆转座子与芥菜型油菜、拟南芥、芜菁、甜菜可能有共同的起源.半定量和实时定量PCR检测表明,水杨酸(salicylic acid)和Peronospora parasitica均能激活不结球白菜Ty1-copia类逆转座子,逆转座子在不结球白菜叶片中的表达特征说明它可能参与寄主对病原菌的抗性.     

青海蚕豆种质资源形态多样性分析

对153份青海蚕豆种质资源的形态多样性进行鉴定, 结果表明, 青海蚕豆种质资源具有丰富的形态多样性,平均多样性指数为0.8033,其中青海地方蚕豆品种多样性最丰富,平均多样性指数为0.8288.通过多变量的主成分分析,前6个主成分代表了蚕豆形态多样性的87.89%.基于形态性状,把153份蚕豆种质聚类并划分为3大组群.第Ⅰ组群,初花天数较长,植株中等,子粒中等,单株荚数和粒数多,单株产量较高;第Ⅱ组群,初花天数较短,株高较矮,子粒小,单株荚数和粒数较多,单株产量低;第Ⅲ组群,初花天数较短,株体较高,单株荚数和粒数少,但子粒较大,单株产量较高.     

普通菜豆种质资源表型鉴定及多样性分析

对646份普通菜豆核心种质在贵州毕节进行了表型鉴定,结果表明,普通菜豆具有丰富的形态性状多样性。总变异数为367,平均遗传丰富度为8.34,变异范围2~31;遗传多样性指数为0.63,变异范围为0.02~0.91。通过多变量的主成分分析,前3个主成分的贡献率较大,分别为17.73%、15.35%和11.33%。依据表型鉴定数据信息,将供试种质聚类并划分为4组。Ⅰ组的遗传多样性较高,主要为直立有限的大粒资源,大多资源属于安第斯基因库;Ⅱ组的遗传多样性最低,为直立无限生长习性的小粒资源,属于中美基因库;Ⅲ组的遗传多样性最高,主要以蔓生无限为主,包括小部分直立无限和匍匐无限的资源;Ⅳ组的遗传多样性较低,为蔓生无限生长习性、株高最高、分枝数最少的资源。筛选到大粒、多荚、长荚、宽荚等具有特异性状的种质资源35份。     

内蒙古扁蓿豆野生资源形态学特性研究

对产自内蒙古不同分布区12份扁蓿豆种质资源的12个形态性状进行主成分和聚类分析。结果表明,除荚果形状和种子宽外,其余形态性状在材料间都表现显著差异,扁蓿豆种质资源遗传变异丰富;通过多变量的主成分分析,第一主成分和第二主成分代表了扁蓿豆形态多样性的62.30%,枝条长、叶面积、荚果宽、种子长和千粒重等5个性状是造成扁蓿豆表型差异的主要因素;基于形态性状的聚类分析把12份材料聚为4类,其中第 1类MR-12扁蓿豆资源的株高、枝条长和株丛直径明显高于其他类,叶片大且叶量丰富,营养性状表现良好;结实性状中荚果长和千粒重较大,综合性状表现较好,可以作为合适的材料作为引种驯化和育种的试验材料。     

134份国外陆地棉种质主要农艺性状与纤维品质性状的遗传多样性分析

为拓宽本地棉花种质基因库,筛选适于作杂交亲本的种质资源,以134份国外棉花种质为试验材料,研究了其主要品质与农艺性状的变异情况、遗传多样性指数、品质性状间的相关性,并以主要农艺与品质性状为指标,对134份种质进行了聚类分析和主成分分析。结果表明,纤维品质性状中整齐度指数的遗传多样性指数(5.16)最高,马克隆值的变异系数(11.96%)最大,农艺性状中霜前衣分的遗传多样性指数(5.42)最高,不孕籽率的变异系数(49.18%)最大,参试种质的遗传多样性丰富;整齐度指数与上半部平均长度、断裂比强度均呈极显著正相关,断裂比强度与上半部平均长度间也呈极显著正相关;10个农艺性状和5个品质性状的主成分分析结果表明,前6个主成分的累计贡献率达75.277%;Ward法聚类将134份参试种质按品质性状分为5类,其中第Ⅱ类群的35份种质棉纤维品质性状表现最好,按农艺性状分为3类,其中第Ⅰ类群的58份种质产量最高。通过综合35份纤维品质优异的种质与58份农艺性状优异的种质筛选出美1870、美1884、FM1830等14份品质与产量俱佳的优异种质。     

内蒙古扁蓿豆野生资源形态特征研究

对产自内蒙古不同分布区12份扁蓿豆种质资源的12个形态性状进行主成分和聚类分析.结果表明,12个形态性状在材料间都表现显著差异,扁蓿豆种质资源遗传变异丰富;通过多变量的主成分分析,前6个主成分代表了扁蓿豆形态多样性的85.72％,株高、叶面积、叶长、株丛直径、枝条长和千粒重等6个性状是造成扁蓿豆表型差异的主要因素;基于形态性状的聚类分析把12份材料聚为4类,其中第4类MR-12扁蓿豆资源的株高、枝条长和株丛直径明显高于其他类,叶片大且叶量丰富,营养性状表现良好;结实性状中英果长和千粒重较大,综合性状表现较好,可以作为引种驯化和育种的试验材料.     

菜用和观赏甘薯种质资源遗传多样性分析

为了发掘菜用和观赏甘薯优异种质资源,通过对国家种质徐州甘薯试管苗库中1000余份资源材料进行鉴定,筛选了96份优异种质。利用30对SSR引物对入选材料进行了遗传多样性和群体结构分析,明确了这些材料遗传差异;并对入选材料12个表型质量性状进行主成分和聚类分析。结果表明:扩增的总条带数为275条,其中多态性条带为269条,多态率97.8%;利用DPS软件计算入选材料间的Nei72遗传距离为0.15~0.76,平均遗传距离0.66;群体结构分为3个组群,与分子标记聚类结果相似,表明入选材料有较大的遗传差异性;表型质量性状主成分分析得到5个主要成分,其累计贡献率达到80.50%;利用表型质量性状,可聚为8个组群。本研究通过分子标记与表型质量性状分析为下一步杂交选育菜用和观赏甘薯新品种提供了亲本选择信息。     

基于SRAP标记的山药种质资源遗传多样性分析

目的:研究我国山药种质资源遗传多样性,为合理利用资源和开展选育种工作提供理论依据。方法:以国内94份山药种质资源为材料,采用SRAP标记并通过NTSYS2.10软件进行SHAN聚类分析、PROJECTION主成分分析;利用POPGENE软件估算遗传多样性参数。结果:从49对SRAP引物中筛选出30对能产生稳定清晰可辨的扩增产物的引物,共扩增出754条DNA带,其中多态性条带616条,占总条带的81.7%。聚类结果表明:当遗传相似系数(GS)为0.822时,可将94份资源分为5类:第Ⅰ类20份、第Ⅱ类43份、第Ⅲ类7份、第Ⅳ类3份、第Ⅴ类21份。第Ⅰ、Ⅱ、Ⅲ、Ⅴ类分别为薯蓣、褐苞薯蓣、山薯和参薯。主成分分析结果显示:第一与第二主成分可解释88.34%(82.10%和6.24%)的遗传总变异。遗传多样性参数分析表明:比较5个遗传多样性参数值,5个群体的遗传多样性水平表现为Ⅰ>Ⅴ>Ⅲ>Ⅱ>Ⅳ,第Ⅰ类(薯蓣)遗传多样性水平高;山药遗传群体间遗传分化系数为51.88%,大部分差异存在于群体之间,群体间遗传分化高。结论:山药种质资源丰富且群体遗传分化高,有利于山药新品种的选育。SRAP标记可有效应用于山药种质资源的鉴别和遗传多样性分析。通过DNA指纹鉴定技术鉴别山药品种具有重要性与紧迫性。     

Evaluation of genetic diversity of parental lines for development of heterotic groups in hybrid rice (Oryza sativa L.)

Knowledge of genetic diversity and potential heterotic relationships among parental lines is of significant importance in hybrid rice breeding programs. In the present study, in order to understand the genetic diversity among 96 parental lines, they were characterized for their diversity with respect to their morphological traits (n?=?12) and molecular markers using a set of 50 SSR markers. Morphological diversity was estimated using Mahalanobis D² statistics in terms of generalized group distance. Based on morphological diversity analysis, the 96 lines were grouped into 5 major and 13 monogenotypic clusters. In molecular marker analysis, the parental lines were consistently clustered into B (Maintainer group) and R (Restorer group) groups based on distance and model based approaches. Strong correspondence was observed between the pedigree of parental lines with molecular genotyping based grouping than morphological trait based grouping. From the results of the present investigation, it is evident that the available diversity among the two groups i.e., maintainer group (B) and restorer group (R) is sufficient for developing heterotic hybrids, but within the maintainer and restorer groups, the diversity is limited, the diversity among restorers was moderate, while it was low among the maintainers and hence efforts are needed for broadening their genetic base of parental lines for development and adoption of high-yielding hybrids.

     

Modulatory influence of Brassica compestris Linn var sarson on phase-II carcinogen metabolizing enzymes and glutathione levels in mice

The present study reports the modulatory influence of 95% ethanolic extract from the seeds of B. compestris on the activity of phase-II enzymes such as glutathione S-transferase (GST), DT-diaphorase (DTD) and reduced glutathione (GSH) level in the skin, lung, kidney and forestomach of the mouse. Oral treatment with the seed extract at 800 mg/kg body wt. for 15 days significantly elevated GST in lung and forestomach and DT-diaphorase in forestomach and skin and GSH level in lung, kidney forestomach and skin. The lower dose 400 mg/kg body wt was effective only in inducing GST and DT-diaphorase activity in forestomach and reduced glutathione level in lung. The findings suggest that B. compestris seed extract may block or suppress the events associated with chemical carcinogenesis at least in part, by inducing metabolic detoxification of the carcinogen.     

重庆地区野生大豆资源区域群居表型多样性初步分析

调查了重庆地区若干野生大豆区域居群的8个形态性状,分析了区域居群的表型多样性。结果显示,数量性状有比较丰富的多样性;区域居群的形态多样性存在一定的地域性(地理相关性);数量性状变异系数大小顺序依次为:百粒重>单株产量>地上部分茎叶干重>株高>播种至开花天数;各形态多样性指数(香农指数)显示,东北部区域>中部区域>西部区域的趋势。通过聚类分析,样本数较多的5个区域居群分为3个地理组和1个特别居群组,显示重庆地区地理区域居群存在明显的西部、中部、东北部生态地理的分化,东北部是形态变异丰富的地区。     

云南金钱槭形态变异与遗传变异的相关性研究

对我国特有珍稀濒危保护植物云南金钱槭的形态变异水平、遗传变异模式以及两者之间的相关性进行了研究。形态学性状分析结果表明 :各居群形态性状变异系数的平均值从大到小排列为 :文山居群 (WSh)、屏边居群 (PB)、黑龙潭居群 (HL T)、蒙自居群 (MZ) ;文山居群与屏边、黑龙潭、蒙自居群间已产生显著或极显著水平的形态差异 ,而后三者间的差异未达显著水平。RAPD分析检测到 10 3个位点 ,其中多态位点 84个 ,云南金钱槭物种水平的多态位点比率为 81.5 5 % ,与其它珍稀濒危植物相比该种的遗传多样性水平不低。 AMOVA和 N ei基因多样性指数分析显示 ,尽管大部分遗传变异仍存在于居群内 (分别为5 7.86 %、5 7.33% ) ,但居群间的遗传变异已达较高水平 (分别为 4 2 .14 %、4 2 .6 7% )。相关分析结果显示 ,云南金钱槭的形态变异与海拔、土壤有机质等生态因子有着显著或极显著水平的相关性 ,但与遗传变异的相关性未达显著水平 ,说明云南金钱槭的形态变异虽然具有一定的遗传基础 ,但可塑性及环境压力对形态变异的产生作用更大一些。基于形态性状和 RAPD数据的聚类分析则进一步说明 ,云南金钱槭的形态变异受到环境因子的强烈影响而与遗传背景的关系不显著     

内蒙古78份葱属野生种表型遗传多样性分析

为了揭示内蒙古葱属野生种表型遗传多样性,采用方差分析、主成分分析、聚类分析等方法,对收集的78份野生种的种质资源14个表型性状进行了遗传多样性评价。结果表明:内蒙古葱属野生资源存在丰富的遗传多样性。(1)14个表型性状平均变异系数为43.0%,叶片宽的变异系数最大,为94.7%;种子厚的变异系数最小,为14.6%。14个表型性状在居群间的差异除叶片宽达到显著(P0.05)水平外,其余性状均表现差异不显著;(2)14个表型性状可归成为6个主成分因子,累计贡献率达到80.77%,最大程度上反映了所有78份葱属种质资源的表型特征,在前6个主成分包括的14个农艺性状中的株丛直径、叶片长、叶片宽、单株叶片数、花序长度、花序宽度和种子宽等性状是造成葱属种质资源表型差异的主要因素;(3)14个表型性状间存在显著或极显著的相关性;(4)采用欧氏距离系统聚类法将供试材料分为7大类,78份葱属种质资源基本上按种区分开,并和地理条件有一定的关系,种间和材料间表型差异很明显。本研究为内蒙古葱属资源的利用提供了科学依据。     

欧洲山芥种质资源的表型遗传多样性分析

欧洲山芥是研究抗虫皂苷生物合成及植食昆虫与植物协同进化机制的理想模式植物,是极具开发潜力的十字花科植物。为加强欧洲山芥种质资源的研究利用,对保存于国家蔬菜种质资源中期库中引自欧洲的33份欧洲山芥种质和1份杂交材料进行了物候期观测、主要形态学性状测定和小菜蛾抗性鉴定。结果表明:多数材料的表型性状的差异较大,材料间现蕾期最早(BV13-BAR13)和最晚(BV13-BAR9)的2份材料相差达47 d;从始花期到末花期的天数分布在17~46 d之间,总体上花期较短;叶表光滑的种质居多;还发现4份角果抱茎的种质;极差和变异系数最大的性状是株高、角果长和花序长。34份材料中仅9份感小菜蛾,其他均具有很高的田间抗性。基于所有表型性状的聚类分析将34份欧洲山芥分为3个类群,抗虫和感虫材料分属不同的类群(F1、BV13-BAR8和BV13-BAR22除外),基本反映出各类群的亲缘关系。本研究结果将为欧洲山芥的遗传改良以及欧洲山芥种质资源在十字花科作物生产和育种上的应用提供基本依据。     

Biscogniauxia mediterranea associated with cork oak (Quercus suber) in Tunisia: Relationships between phenotypic variation,genetic diversity and ecological factors

Biscogniauxia mediterranea is a xylariaceous ascomycete responsible for ‘charcoal disease’, the most frequent disease of cork oak in the Mediterranean basin. However, little is known regarding this fungus in North Africa. This is the first report on the morphological and genetic diversity of B. mediterranea populations in Tunisia.A total of forty-eight isolates from cork oak trees, corresponding to three different sites and three tree parts, were identified as B. mediterranea based on morphological and molecular diagnosis. Variability among the isolates was evaluated using morphological traits and microsatellite-primed PCR (MSP-PCR). B. mediterranea isolates showed high variability in culture, specifically in colony color. A high level of genetic diversity within populations and within tree parts was detected (H = 0.417, I = 0.605, and H = 0.415, I = 0.601 respectively). Significant genetic differentiation among populations (G_ST = 0.116 and Φ_ST = 0.137; p < 0.001) was determined. However, a low genetic differentiation among tree parts (G_ST = 0.066 and Φ_ST = 0.018; p = 0.07) was observed. Principal coordinate analysis showed that genetic divergence was partially related to the geographical origin. Cluster analysis based on morphological traits showed that the grouping of the isolates occurs independently of the geographic location and the tree part. The effective number of alleles (Ne), the Nei's gene diversity index (H), the Shannon's information index (I), the colony color and the presence of exudates were significantly correlated with the altitude and the rainfall. The number of alleles (Na), the percentage of polymorphic loci (PPL), the texture and the density of the mycelium were significantly correlated with the temperature. These results provide a deeper understanding of population genetics of B. mediterranea and its adaptation to environmental conditions which could help to develop control strategies against charcoal canker disease.     

Molecular assessment of genetic diversity in mung bean germplasm

RAPD profiles were used to identify the extent of diversity among 54 accessions of mung bean that included both improved and local land races. Out of the 40 primers screened, seven primers generated 174 amplification products with an average of 24.85 bands per primer. The RAPD profiles were analysed for Jaccard's similarity coefficients that was found to be in the range from 0 to 0.48, indicating the presence of wide range of genetic diversity at molecular level. Cluster analysis was carried out based on distances (1-similarity coefficient) using neighbour-joining method in Free Tree package. The dendrogram resolved all the accessions into two major clusters, I (with 11 accessions) and II (with 43 accessions). However, the cluster was further divided into four subclusters (II A with six, II B with nine, II C with 15 and II D with 13 accessions). The distribution of the accessions in different clusters and subclusters appears to be related to their performance in field conditions for 10 morphological traits that were scored. This study indicated that the RAPD profiles provide an easy and simple technique for preliminary genetic diversity assessment of mung bean accessions that may reflect morphological trait differences among them.     

Morphological heterogeneity of Bordetella pertussis populations and clones (based on electron microscopy data)

Populations belonging to different serovars of B. pertussis museum strains and antibiotic-resistant clones obtained from them have been studied by electron microscopy. As a result, morphological heterogeneity and differences in the ultrastructure of the cells with respect to the cell-wall structure, the character of the cytoplasm, the size of the cells, cytoplasmic inclusions and intracellular links have been demonstrated and, proceeding from these data, two main morphological variants of the cells have been defined. The cells of the morphological variant characterized by the pliciform surface of the outer membrane and the pronounced periplasmic space prevail among the populations of the museum strains. The possibility of the isolation of antibiotic-resistant clones, differing in their morphological structure and functional properties from the initial population, has been shown. The morphological diversity of B. pertussis population is the necessary condition for the existence and development of microbial populations.     

Genetic diversity and taxonomic studies of date plum (Diospyros lotus L.) using morphological traits and SCoT markers

Date plum persimmon (Diospyros lotus L.) is an important fruit crop in China due to its better compatibility as a major root stock for Diospyros kaki Thunb. The objective of this study was to reveal the diversity and taxonomic status based on morphological and molecular markers for 26 date plum persimmon accessions from different ecogeographical areas. Significant variability was observed in the 26 date plum persimmon accessions using the analysis of 5 quantitative and 16 qualitative morphological characters of branches, fruits and seeds. Molecular diversity was analyzed using start codon targeted (SCoT) markers. A total of 118 bands were produced with 11 SCoT primers; genetic similarity was ranged from 0.42 to 0.83, which indicating higher genetic variation among accessions. Based on the cluster results of morphological and molecular data, the results showed that date plum persimmon may be divided into five taxonomic types which including male date plum persimmon, rounded seedless date plum persimmon, rounded seedy date plum persimmon, obround seedless date plum persimmon, and oblate seedy date plum persimmon.