Development of microsatellite primers for Jatropha curcas (Euphorbiaceae) and transferability to congeners

? Premise of the study: Microsatellite primers were developed for Jatropha curcas (Euphorbiaceae), a tree species with large potential for biofuel production, to investigate its natural genetic diversity and mating system to facilitate the establishment of tree improvement and conservation programs. ? Methods and Results: Using a protocol for genomic library enrichment, 104 clones containing 195 repeat motifs were identified. Primer pairs were developed for 40 microsatellite loci and validated in 41 accessions of J. curcas from six provenances. Nine loci were polymorphic revealing from two to eight alleles per locus, and six primers were able to amplify alleles in the congeners J. podagrica, J. pohliana, and J. gossypifolia, but not in other Euphorbiaceae species, such as Hevea brasiliensis, Manihot esculenta, or Ricinus communis. ? Conclusions: The primers developed here revealed polymorphic loci that are suitable for genetic diversity and structure, mating system, and gene flow studies in J. curcas, and some congeners.     

西南地区麻疯树天然种群遗传多样性的等位酶变异

为了揭示麻疯树(Jatropha curcas)天然种群的遗传多样性和遗传结构, 采用聚苯烯酰胺凝胶垂直平板电泳技术, 对采自四川、云南、贵州3个省的10个麻疯树天然种群的叶片样本进行了同工酶分析。7个酶系统10个位点的检测结果表明: 麻疯树种群水平上的遗传多样性较高, 每位点平均等位基因数为2.428 6, 多态位点百分率为97.14%, 平均期望杂合度为0.396 4。种群间遗传分化系数为0.041 3, 种群间总的基因流较高, 为5.808 9, 种群间遗传一致度较高(Shannon信息指数为0.921 7- 0.995 3)。非加权类平均法(UPGMA)聚类结果显示, 10个种群的遗传距离与地理距离相关性不显著。麻疯树天然种群具有较低程度的遗传分化、较高的基因流, 种内及种群内多样性丰富, 这为麻疯树优良品种的选育提供了良好的遗传基础。     

中国麻风树种质资源SSR遗传多样性的研究初报

麻风树（Jatropha curcas）是世界上最有潜力的能源植物之一。本研究针对来自全国6省区的219份麻风树种质资源,应用SSR分子标记对其进行了初步的遗传多样性分析。根据公共数据库中的所有序列设计出了20对SSR及4对eSSR引物,这些引物均能很好地扩增麻风树DNA片段。在上述24个SSR标记中,有8个（33.33%）探测到麻风树群体的DNA多态性。这24个SSR标记共扩增出36个位点,平均每个标记扩增1.5个位点,其中12个（33.33%）位点显现出多态性。这表明中国麻风树是一个具有中等SSR多态性水平的物种,其多态百分率为33.3%。     

Structure prediction and binding sites analysis of curcin protein of Jatropha curcas using computational approaches

Ribosome inactivating proteins (RIPs) are defense proteins in a number of higher-plant species that are directly targeted toward herbivores. Jatropha curcas is one of the biodiesel plants having RIPs. The Jatropha seed meal, after extraction of oil, is rich in curcin, a highly toxic RIP similar to ricin, which makes it unsuitable for animal feed. Although the toxicity of curcin is well documented in the literature, the detailed toxic properties and the 3D structure of curcin has not been determined by X-ray crystallography, NMR spectroscopy or any in silico techniques to date. In this pursuit, the structure of curcin was modeled by a composite approach of 3D structure prediction using threading and ab initio modeling. Assessment of model quality was assessed by methods which include Ramachandran plot analysis and Qmean score estimation. Further, we applied the protein-ligand docking approach to identify the r-RNA binding residue of curcin. The present work provides the first structural insight into the binding mode of r-RNA adenine to the curcin protein and forms the basis for designing future inhibitors of curcin. Cloning of a future peptide inhibitor within J. curcas can produce non-toxic varieties of J. curcas, which would make the seed-cake suitable as animal feed without curcin detoxification.     

Antiquity, botany, origin and domestication of Jatropha curcas (Euphorbiaceae), a plant species with potential for biodiesel production

Jatropha curcas is a multi-purpose plant species, with many advantages for biodiesel production. Its potential oil productivity is 1.9 t/ha, beginning the fourth year after planting. Nevertheless, limitations such as high harvest cost, lack of scientific konowledge and low profitability have prevented it from being utilized commercially. In order to provide information that could be useful to improve the status of this species as a bioenergy plant, we elucidated the center of origin and the center of domestication of J. curcas (Mexico). Evidence of the antiquity of knowledge of J. curcas by Olmeca people, who lived 3500-5000 years ago, reinforces its Mexican origin. The existence of non-toxic types, which only exist in that country, along with DNA studies, also strongly suggest that Mexico is the domestication center of this species. In Brazil, the Northern region of Minas Gerais State presents types with the highest oil content. Here we propose this region as a secondary center of diversity of J. curcas.     

土壤水、氮供应对麻疯树幼苗光合特性的影响

在盆栽半控制试验中, 采用两因素的随机区组设计, 在3个土壤水分梯度(分别为80%、50%和30%的田间持水量(FC))下研究了施氮肥和不施氮肥处理麻疯树(Jatropha curcas)幼苗的光合特性。比较了不同水分和氮素供应条件下麻疯树幼苗的光合-光响应和CO₂响应曲线、PSII的最大光化学效率(F_v/F_m)、氮含量和光合色素含量之间的差异。结果表明: 1)施氮肥处理中, 随着土壤水分含量的增加, 叶片表观量子效率(AQY)、光补偿点、最大净光合速率、羧化效率、光呼吸速率、暗呼吸速率和叶片氮含量均呈现增加的趋势, 而且均在80% FC下最高。2)不施氮肥处理中, 随着土壤水分含量的增加, 麻疯树各光合参数均与施氮肥处理呈现相反的变化趋势。3)在30% FC下, 施氮肥处理和不施氮肥处理相比, 氮含量显著增加, AQY、F_v/F_m、光合色素含量无显著的变化, 其他各项指标均显著降低。这些结果表明, 水氮耦合效应对麻疯树光合特性有显著影响, 尤其是在80% FC下增施氮肥的效果最为明显。因此, 在土壤氮素含量不高的情况下, 麻疯树更适宜在较低的土壤水分下生长, 土壤水分较高反而不利于麻疯树的光合作用; 而如果增施氮肥, 麻疯树在土壤水分含量较高时生长更好。     

Aquaporin JcPIP2 is involved in drought responses in Jatropha curcas

Water channel proteins, aquaporins, play fundamental roles in transmembrane water movements in plants. A new full-length cDNA encoding aquaporin was isolated from the seedlings of Jatropha curcas. The gene of the plasma membrane intrinsic protein （PIP） from J. curcas （JcPIP2） contained an 843 bp open reading frame encoding a protein of 280 amino acids. The amino acid sequence showed 94% identity with Ricinus communis PIP. Injection of JcPIP2 complementary RNA into Xenopus oocytes increased 10-fold the osmotic water permeability of the oocytes. Immunodetection of JcPIP2 with anti-JcPIP2 antibody indicated that this protein is ubiquitously located in all tested tissues of the plant. To investigate the relationship between aquaporins and drought resistance in J. curcas, the abundance of JcPIP2 was examined in seedlings of two J. curcas populations, GaoYou CSC63 and YanBian S 1, under water deficit with PEG6000. Under field conditions, those two populations, GaoYou CSC63 was resistant to water deficit, but YanBian S 1 was sensitive to water deprivation. With the increasing degree of drought stress, JcPIP2 level increased in seedlings of GaoYou CSC63, whereas there was no significant change in seedlings of YanBian S 1. Compared with YanBian S 1, GaoYou CSC63 also showed higher root hydraulic conductivity and lower decreasing trend in the seed- lings under water deficit. These results indicated that JcPIP2 probably played a role in drought resistance in J. curcas.     

短帚霉发酵脱除小桐子饼的毒性

膏桐饼作为生物柴油产业中产生的最大宗副产物,其高蛋白、低纤维含量的特性有望使其开发成为一种优良的蛋白饲料,但毒性限制了其直接作为饲料利用。发酵是多种饼粕脱毒的常用方法。分离、纯化膏桐根际微生物并分别发酵膏桐饼,用甲醇提取发酵膏桐饼的毒性成分并溶于水中,通过鲤鱼存活时间来评价不同菌株发酵膏桐饼的毒性,筛选获得了一株能够在膏桐饼上快速生长并能有效脱除膏桐饼毒性的短帚霉。脱毒小桐子饼组的小鲤鱼存活时间与对照组相比延长了1.22倍。     

Life cycle assessment of biofuels from Jatropha curcas in West Africa: a field study

In recent years, liquid biofuels for transport have benefited from significant political support due to their potential role in curbing climate change and reducing our dependence on fossil fuels. They may also participate to rural development by providing new markets for agricultural production. However, the growth of energy crops has raised concerns due to their high consumption of conventional fuels, fertilizers and pesticides, their impacts on ecosystems and their competition for arable land with food crops. Low-input species such as Jatropha curcas , a perennial, inedible crop well adapted to semiarid regions, has received much interest as a new alternative for biofuel production, minimizing adverse effects on the environment and food supply. Here, we used life-cycle assessment to quantify the benefits of J. curcas biofuel production in West Africa in terms of greenhouse gas emissions and fossil energy use, compared with fossil diesel fuel and other biofuels. Biodiesel from J. curcas has a much higher performance than current biofuels, relative to oil-derived diesel fuels. Under West Africa conditions, J. curcas biodiesel allows a 72% saving in greenhouse gas emissions compared with conventional diesel fuel, and its energy yield (the ratio of biodiesel energy output to fossil energy input) is 4.7. J. curcas production studied is eco-compatible for the impacts under consideration and fits into the context of sustainable development.     

Preliminary Study on Development,Germination and Desiccation Tolerance of Jatropha curcas (Euphorbiaceae)

The developmental changes in morphology and germinability of Jatropha curcas seeds, effects of temperature and light on seed germination , and changes in desiccation tolerance of mature seeds were studied in this paper. The results indicated that J. curcas seeds reached a physiological maturation at 58 days after anthesis, and that seed germination percentage reached a peak at physiological maturation, and then decreased. The optimal germination temperature was 25 to 30℃. J. curcas seeds were insensitive to dehydration at physiological maturation . There was not a notable effect of light on seed germination. Therefore, J. curcas seed was a non-photoblastic and orthodox seeds .     

基于最大信息熵模型的能源物种麻疯树潜在适宜区

麻疯树(Jatropha curcas L.)为传统能源植物,是作为生物柴油最具希望的植物资源之一。本研究通过收集麻疯树分布点的经纬度数据,基于气候、土壤和地形等37个相关生态因子,采用最大信息熵模型,预测麻疯树的潜在适宜区域,分析影响其生长的主要生态因子特征。结果显示,麻疯树生长最适宜区域主要分布在我国华南地区的广东、海南、香港、台湾和西南地区的广西、云南、四川;对麻疯树分布贡献率较大的主要生态因子为:最暖季度降水量(53.5%)、温度季节性变化标准差(15.8%)、降水量变异系数(9.3%)、年均温变化范围(5.8%)、最湿季度降水量(3.6%)、最干月降水量(3.2%);Maxent模型预测的AUC值大于0.9,表明对麻疯树潜在分布的预测结果较准确。本文对麻疯树潜在分布区域以及影响其分布的主要生态条件的研究结果,可为麻疯树的种植栽培提供科学依据。     

小桐子内生真菌及其抗真菌活性研究

从药用植物小桐子的根和茎中分离到内生真菌57株,经鉴定,它们分属于15个不同的分类单元。其中拟盘多毛孢为优势属,其次为拟茎点霉属和茎点霉属。用杨桃炭疽菌,香蕉疫霉和镰刀菌作指示菌对这些内生真菌的抗真菌活性进行检测,结果表明,有2株菌对杨桃炭疽菌具有抑菌活性。     

镉胁迫下麻疯树转录组测序分析

麻疯树是一种能适应多种恶劣环境条件的能源植物,目前关于其抵抗重金属胁迫的分子调控机理尚不清楚。从组学水平整体分析其基因表达模式对于筛选关键基因、解析镉胁迫响应调控网络和促进分子育种具有重要意义。利用Illumina测序技术对水培条件下培养的处理组(Cd 100)和对照组(CK)麻疯树幼苗叶的转录组进行高通量测序,两个数据库的测序数据经de novo组装得到50448条高质量的Unigene。两个样品中发现了2551条差异表达基因,其中539条上调基因,2012条下调基因。根据不同数据库的注释信息,发现麻疯树镉胁迫引起叶片中多种代谢途径的变化,包括碳代谢,光合作用,植物激素信号转导以及植物病原响应途径。DAVID分析显示镉胁迫引起了麻疯树叶中与离子转运相关基因的变化,导致叶片中Na离子和铁离子稳态的变化。转录因子分析发现WRKY和ZIP在镉胁迫中发挥重要作用。用qRT-PCR技术对随机挑选的5个基因进行荧光定量验证,结果与测序数据一致,证实了差异表达基因数据的有效性。深入探讨了麻疯树镉胁迫的分子机理,为进一步应用于基因工程和植物修复提供基础。     

大戟科麻疯树属三种植物花器官发生

利用扫描电子显微镜观察了大戟科Euphorbiaceae麻疯树属Jatropha麻疯树J. curcas L.、佛肚树J. podagrica Hook.和棉叶麻疯树J. gossypifolia L.花器官发生。结果表明: 麻疯树、佛肚树和棉叶麻疯树花萼原基均为2/5型螺旋发生。在同一个种不同的花蕾中, 花萼的发生有两种顺序: 逆时针方向和顺时针方向。远轴面非正中位的1枚先发生。5枚花瓣原基几乎同时发生。雄花中雄蕊两轮, 外轮对瓣, 内轮对萼。研究的3种麻疯树属植物雄蕊发生方式有两种类型: 麻疯树亚属麻疯树的5枚外轮雄蕊先同时发生, 5枚内轮雄蕊后同时发生, 佛肚树亚属佛肚树和棉叶麻疯树雄蕊8-9枚, 排成两轮, 内外轮雄蕊同时发生。雌花的3枚心皮原基为同时发生。麻疯树属单性花, 雌花的子房膨大而雄蕊退化, 雄花的雄蕊正常发育, 子房缺失。根据雄蕊发生方式, 支持将麻疯树属分为麻疯树亚属subgen. Jatropha和佛肚树亚属subgen. Curcas。     

过氧化氢脱毒前后小桐子油饼营养成分分析

小桐子(Jatropha curcas Linn.)又名麻疯树,属于大戟科(Euphorbiaceae)麻疯树属(Jatropha Linn.)植物,在中国西南各省均有大规模种植基地。小桐子树皮和叶片具有多种生物活性[1-2];种子含丰富油脂,可作为生物柴油的原料[3]。小桐子油饼是一种在小桐子生物柴油生产过程中大量产生的副产品,其中的蛋白质含量较高、氨基酸组成合理,是优     

麻疯树分子生物学研究进展

麻疯树Jatropha curcas L.作为一种新兴的生物柴油型能源树种已经得到广泛的认可,关于它的各项研究持续升温。文中综述了近年来国内外关于麻疯树分子生物学方面的研究进展,一是揭示麻疯树遗传多样性和系统分类的分子标记研究;二是全面解析麻疯树分子网络的基因组、转录组和蛋白质组研究;三是以培育优质高抗品系为目标的代谢和发育调控相关基因的分离、克隆和功能研究;最后讨论了目前研究的不足和麻疯树未来分子生物学研究的方向。     

麻疯树水通道蛋白新基因JcPIP干旱胁迫下的功能分析

采用RT-PCR和RACE技术,从大戟科(Euphorbiaceae)耐旱植物麻疯树(Jarropha curcas)cDNA中克隆得到了一个麻疯树质膜内膜蛋白(PIP)新基因,命名为JcPIP.聚类分析表明,麻疯树PIP蛋白与蓖麻、葡萄和菠菜的PIP蛋白在进化上有最近的亲缘关系.将JcPIP基因在非洲爪蟾卵母细胞(xenopus oocytes)中异源表达发现细胞膨胀率扩大了10倍,表明JePIP基因编码的是一个水通道蛋白.合成亲水性、抗原性好的JcPIP保守序列多肽,制备并纯化JcPIP多克隆抗体.Western-bbt检测显示JcPIP蛋白富集在29 kDa区段,且在麻疯树各组织中均有大量表达.PEG-6000干旱胁迫下麻疯树叶片JcPIP蛋白丰度增加,复水后丰度开始下降,表明JcPlP与麻疯树的耐旱性相关.     

Irritant phorbol derivatives from four Jatropha species

Four Jatropha species used in folk medicine were screened for irritant constituents. By chromatographic and countercurrent distribution procedures, highly irritant factors were isolated from each species. They represent new polyunsaturated esters of the tigliane-type diterpenoids 16-hydroxyphorbol (J. podagrica, J. multifida) and 12-deoxy-16-hydroxyphorbol (J. curcas, J. gossypifolia).     

小油桐籽提取液对作物种子萌发及幼苗生长的影响

研究不同浓度的小油桐籽水提取液及酒精提取液对‘贵杂110号’油菜、‘卓越’黑麦草及‘早麦10号’小麦种子萌发及幼苗生长的影响。结果表明,小油桐籽水提取液对3种作物种子发芽率、幼苗的芽长及根长有抑制作用,且随浓度提高抑制作用增强;酒精提取液对黑麦草与小麦的种子发芽、幼苗芽和根的生长有抑制作用,但特定浓度可促进油菜幼苗芽的生长。     

小桐子生殖组织基因表达谱

虽然表达序列标签(ESTs,mRNA片段序列)已广泛用于高效基因发现和补充基因组注释的工作,最近,与实时荧光定量反转录PCR(qRT-PCR)结合,它也开始应用于种系遗传学、转录谱及其蛋白组学方面.通过对油料木本植物小桐子(J.curcas)的生殖组织基因表达水平的分析,预期可能找到一些与油脂合成相关的基因.这些研究成...