83株呼吸道分离真菌的菌种及耐药性分析

真菌为条件致病菌,正常情况下属于呼吸道的过路菌,当机体免疫力低下时容易发生内源性感染。近年来各类标本,尤其是呼吸道标本或咽拭子真菌的检出率明显上升,且耐药性不断增加,为及时了解这一变化趋势,本文对83株自呼吸道分离的真菌,用VITEKAutoMicrobicSystem(AMS)进行菌种鉴定,用ATBFungus(ATB)进行药敏试验,现将结果报道如下。1　材料与方法1.1　菌株来源　83株真菌自我院1997年6月至1998年6月住院及门诊病人的痰液或咽拭子中分离所得。1.2　菌种鉴定　用AMS进行菌种鉴定,鉴定值≥0.80。1.3　药敏试验　用ATB进行药敏试验,所测…     

rDNA-ITS序列鉴定深部真菌菌种的研究进展

目前深部真菌病的发生率呈逐渐上升趋势,有关深部真菌菌种的鉴定成为研究热点。由于传统的菌种鉴定方法存在费时及易受实验条件影响等不足,核糖体rDNA-ITS序列分析法已越来越广泛的应用于真菌属内不同种间的系统发育研究中。本文综述了核糖体rDNA-ITS鉴定深部真菌菌种的研究进展,展望了其应用前景。     

深部真菌感染临床特点分析

目的了解深部真菌感染患者的性别、年龄、感染部位、住院科室、菌种分布及真菌耐药情况,为临床防治真菌感染提供研究依据。方法收集荆州市中心医院2009年1月至2009年12月微生物实验室分离的真菌446株,采用科马嘉显色琼脂及API220C Aux鉴定系统鉴定,并使用ATMTMFUNGUS3真菌药敏卡进行体外药敏试验。结果临床真菌感染男性占72%,以老年患者为主,大于60岁者占54.9%;感染的真菌主要分布于呼吸内科和ICU,分别占35.5%、24.9%;主要感染部位为呼吸道,占91.3%;主要菌种为白假丝酵母菌、热带念株菌、近平滑假丝酵母菌、光滑念株菌和克柔念株菌,分别占64.2%、13.2%、9.6%、7.6%和5.4%;合并细菌感染的感染真菌100株,占22.2%,细菌中以革兰阴杆性菌为主,占96%;药敏试验结果显示真菌对各抗真菌药具有较好的敏感性。结论临床真菌感染已日益突出,以呼吸科及ICU患者老年男性为主,儿童真菌感染亦不容忽视,感染菌种以白假丝酵母菌和热带念株菌为主,临床应加强对这些真菌感染的预防和监测,防止真菌感染。     

HIV感染患者口咽、鼻腔内真菌分离率的调查

目的了解HIV感染者口咽及鼻腔内真菌分离阳性率。方法用无菌拭子采集口咽腔溃疡、白斑、口角炎等和咽颊区黏膜分泌物,鼻腔取下鼻甲黏膜或中鼻道黏膜分泌物,直接接种于1 mL沙堡弱液体培养基中。取该离心沉淀物作真菌直接镜检,并接种于科玛嘉念珠菌显色培养基置37℃培养48 h后鉴定。如为丝状真菌,转种于察氏琼脂。25℃培养1周后根据菌落形态结合镜下结构鉴定菌种。结果 94例HIV感染者在口咽腔中真菌培养阳性62例(66%),分离出65株真菌,在鼻腔中真菌培养阳性48例(51%),分离出57株真菌。结论 HIV感染者免疫功能低下,易继发真菌机会性感染,口咽及鼻腔真菌的高寄居率是HIV侵袭性真菌感染的先兆症状,真菌菌种以白念珠菌比例为最高,口咽及鼻腔分别61%和33%。     

中国大陆地区丛枝菌根真菌菌种资源的分离鉴定与形态学特征

【目的】分离收集保藏中国大陆各个地区不同生态环境的丛枝菌根真菌菌种资源,为丛枝菌根的研究提供资源、奠定基础。【方法】以高粱为宿主植物,采用诱导培养、单孢培养和扩繁培养分离土壤样品中的丛枝菌根真菌菌种并鉴定。【结果】从我国大陆的45个地区50余种宿主植物根区土壤中分离到丛枝菌根真菌135株,隶属于23个种;对各个菌株的形态特征进行了描述。【结论】我国蕴藏着丰富的丛枝菌根真菌菌种资源,文中描述的菌种资源是目前从我国大陆地区获得的种类和数量最多、覆盖范围最广的AM真菌菌种资源。     

辽宁省微生物菌种保藏中心

<正>辽宁省微生物菌种保藏中心是2005年经辽宁省科技厅批准、依托辽宁省微生物科学研究院组建的东北三省唯一的微生物菌种专业保藏管理机构,主要从事微生物菌种资源分离、收集、鉴定、评价,优良菌种选育、保藏、供应及对外交流,开展微生物菌种保藏与应用技术研究。本中心拥有完备的菌种保藏管理设施,拥有可容纳50000株菌种的低温保藏库和可保藏1200种的大型真菌标本库。现有用于环境、工业、农业、检测、食药用真菌等行业的各类菌种2000余株,有大量高性能的优良生产菌株。中心现有研究人员13人,其中高级职称5人。设有菌种鉴定、菌种性能评价与应用、分子生物学等实验室,拥有先进的菌种鉴定与分析技术手段,建立了表型分析技术、系统发育学分析技术、基因型分析技术等多项鉴定技术     

濮阳市部分浅部真菌病中癣菌和念珠菌混合感染的分析

目的了解濮阳地区部分浅部真菌病中两种及两种以上真菌混合感染的情况。方法对临床确诊为浅部真菌病的患者456例,取标本行10%KOH直接镜检、真菌培养及菌种鉴定。登记确诊患者相关临床资料,分析其中混合感染的发病特点。结果确诊皮肤癣菌和念珠菌混合感染病例36例,分离率为7.89%,多见于股部(58.33%)和足部(27.78%);分离菌株72株,皮肤癣菌中以红色毛癣菌为主(75.00%),念珠菌中以非白念珠菌为主(72.22%)。结论濮阳地区部分浅部真菌病中混合感染主要为皮肤癣菌和念珠菌的混合感染,多见于股部和足部;致病菌以红色毛癣菌和非白念珠菌为主。     

辽宁省微生物菌种保藏中心

正辽宁省微生物菌种保藏中心是2005年经辽宁省科技厅批准、依托辽宁省微生物科学研究院组建的东北三省唯一的微生物菌种专业保藏管理机构,主要从事微生物菌种资源分离、收集、鉴定、评价,优良菌种选育、保藏、供应及对外交流,开展微生物菌种保藏与应用技术研究。本中心拥有完备的菌种保藏管理设施,拥有可容纳50000株菌种的低温保藏库和可保藏1200种的大型真菌标本库。现有用于环境、工业、农业、检测、食药用真菌等行业的各类菌种2000余株,有大量高性能的优良生产菌株。中心现有研究人员13人,其中高级职称5人。设有菌种鉴定、菌种性能评价与应用、分子生物学等实验室,拥有     

浅部真菌病1948份临床标本的真菌学分析

目的 通过对浅部真菌病患者临床送检标本的病原真菌菌种进行系统分析,了解感染及病原真菌的分布情况。方法 采用直接镜检、培养及真菌鉴定等方法对临床送验标本进行检验和鉴定,大部分标本鉴定到种。结果 1948份临床送验标本中,直接涂片镜检阳性率53．41％,培养阳性率40．28％,而镜检＋培养的阳性率为66．98％。对上述3种方法的真菌检出率进行比较,均存在显著差异（χ^2检验P均〈0．005）。在培养的1944份标本中,共分离出18个属,36种真菌,其中,红色毛癣菌24．52％、须癣毛癣菌16．48％、白念珠菌12．64％。结论 ①镜检结合培养的阳性率显著高于单一的镜检或培养的阳性率。②在患者即时的真菌镜检阴性时,应选择培养方法进一步检测,不轻易排除浅部真菌病感染可能。③皮肤癣菌居患者浅部真菌病致病菌首位,而白念珠菌及酵母类菌也是重要病原菌。     

辽宁省微生物菌种保藏中心

<正>简介辽宁省微生物菌种保藏中心是2005年经辽宁省科技厅批准、依托辽宁省微生物科学研究院组建的东北三省唯一的微生物菌种专业保藏管理机构,主要从事微生物菌种资源分离,收集、鉴定、评价,优良菌种选育、保藏、供应及对外交流,开展微生物菌种保藏与应用技术研究。本中心拥有完备的菌种保藏管理设施。拥有可容纳50000株菌种的低温保藏库和可保藏1200种的大型真菌标本库。开通了辽宁省微生物菌种资源共享平台网站。现有用于环境,工业、农业、检测、食药用真菌等行业的各类菌种2000余株,有大量高性能的优良生产菌株。中心现有研究人员13人,其中高级职称5人。设有菌种鉴定、菌种性能评价与应用、分子生物学等实验室,拥有先进的菌种鉴定与分析技术手段,建立了表型分析技术、系统发育学     

Quantitative methods for the analysis of zoosporic fungi

Quantitative estimations of zoosporic fungi in the environment have historically received little attention, primarily due to methodological challenges and their complex life cycles. Conventional methods for quantitative analysis of zoosporic fungi to date have mainly relied on direct observation and baiting techniques, with subsequent fungal identification in the laboratory using morphological characteristics. Although these methods are still fundamentally useful, there has been an increasing preference for quantitative microscopic methods based on staining with fluorescent dyes, as well as the use of hybridization probes. More recently however PCR based methods for profiling and quantification (semi- and absolute) have proven to be rapid and accurate diagnostic tools for assessing zoosporic fungal assemblages in environmental samples. Further application of next generation sequencing technologies will however not only advance our quantitative understanding of zoosporic fungal ecology, but also their function through the analysis of their genomes and gene expression as resources and databases expand in the future. Nevertheless, it is still necessary to complement these molecular-based approaches with cultivation-based methods in order to gain a fuller quantitative understanding of the ecological and physiological roles of zoosporic fungi.     

Translocation induced outgrowth of fungi in nutrient-free environments

The study of alternatives to chemical methods of nematode control in agriculture has received significant recent interest. One such method is biological control using nematode trapping fungi such as Arthrobotrys superba. To understand how these fungi can be implemented as effective nematicides, it is essential to study their outgrowth into soil from localized nutrient resources. In this paper, we use a mathematical model to investigate the outgrowth of fungi into an environment essentially without available nutrients capable of supporting net growth. By comparing model solutions with experimental results, we show that in such circumstances, continual mycelial expansion can only be obtained if internal metabolites are actively translocated through the mycelium. Predictions are made concerning the maximal extension possible from a given quantity of nutrients and a testable functional relationship between the two is derived. Using this modelling technique we are able to map not only biomass extent but also biomass distribution at each stage. The type of environmental heterogeneity investigated here is encountered by many species of fungi in nature and is of relevance for the introduction of specific fungi into soil for biological control or bioremediation purposes.     

Development and validation of an oligonucleotide microarray to characterise ectomycorrhizal fungal communities

Background  

In forest ecosystems, communities of ectomycorrhizal fungi (ECM) are influenced by several biotic and abiotic factors. To understand their underlying dynamics, ECM communities have been surveyed with ribosomal DNA-based sequencing methods. However, most identification methods are both time-consuming and limited by the number of samples that can be treated in a realistic time frame. As a result of ongoing implementation, the array technique has gained throughput capacity in terms of the number of samples and the capacity for parallel identification of several species. Thus far, although phylochips (microarrays that are used to detect species) have been mostly developed to trace bacterial communities or groups of specific fungi, no phylochip has been developed to carry oligonucleotides for several ectomycorrhizal species that belong to different genera.     

虫生真菌的多样性

虫生真菌分属菌物界各分类阶元,它们除在物种上种类繁多外,在形态结构、生活史、繁殖方式、致病机理和次生代谢产物方面亦极具多样化。了解虫生真菌的多样性对正确鉴定它们的分类地位,探明疾病发生的侵染单元,以及多方位,多层次地利用虫生真菌的功能和次生代谢产物具有重要的学术意义和实用价值     

Thermoregulation of termite mounds: what role does ambient temperature and metabolism of the colony play?

Summary: Termites are well known for their ability to regulate the environment of their nest such as temperature and humidity. The influence of fluctuating ambient temperature and mound characteristics on mean nest temperature and daily fluctuation of nest temperature was analysed quantitatively in the fungus-cultivating, mound-building termite Macrotermes bellicosus (Macrotermitinae) in the savanna of the Comoé National Park (Côte d'Ivoire). Additionally, the nest temperatures of inhabited and uninhabited mounds were compared to analyse the contribution of ambient temperature to nest temperature in relation to metabolic heat production of the termites and their fungi. Mound structure alone resulted in a relatively constant nest temperature. Abiotic heat production via solar radiation alone yielded nest temperatures that corresponded to mean ambient temperatures. However, only the production of metabolic heat by the termites and the fungi increased these temperatures to the actual nest temperature. Therefore, and due to the high heat capacities of the mounds, large colonies (mound height above 2.0 m) had higher nest temperatures than smaller ones. Only large colonies attain constant nest temperatures of 30 °C that are largely independent from ambient temperatures and optimal for the growth and development of the termites and their fungi.     

Fungal molecular diagnostics: a mini review

Conventional methods to identify fungi have often relied on identification of disease symptoms, isolation and culturing of environmental organisms, and laboratory identification by morphology and biochemical tests. Although these methods are still fundamental there is an increasing move towards molecular diagnostics of fungi in all fields. In this review, some of the molecular approaches to fungal diagnostics based on polymerase chain reaction (PCR) and DNA/RNA probe technology are discussed. This includes several technological advances in PCR-based methods for the detection, identification and quantification of fungi including real-time PCR which has been successfully used to provide rapid, quantitative data on fungal species from environmental samples. PCR and probe based methods have provided new tools for the enumeration of fungal species, but it is still necessary to combine the new technology with more conventional methods to gain a fuller understanding of interactions occurring in the environment. Since its introduction in the mid 1980's PCR has provided many molecular diagnostic tools, some of which are discussed within this review, and with the advances in micro-array technology and real-time PCR methods the future is bright for the development of accurate, quantitative diagnostic tools that can provide information not only on individual fungal species but also on whole communities.     

胃病患者胃黏膜真菌感染的检测

通过检测胃炎和胃溃疡、胃癌患者胃黏膜寄居的真菌,了解胃黏膜真菌的菌种多样性及其与胃溃疡的关系。采集消化科就诊患者胃镜钳取的胃黏膜标本63例,采用念珠菌显色培养基(CHROMagar)进行真菌分离培养鉴定。用玉米吐温80培养基进行真菌孢子形态学检查,用ITS(internal transcribed spacer region)序列限制性片段长度多态性(Restriction fragment length polymorphism,RFLP)检测分析真菌菌种多样性。分离培养真菌32(32/63,50.8%)株,经ITS序列RFLP法鉴定为白假丝酵母菌31株,光滑假丝酵母菌1株。真菌阳性率与病理诊断成正相关(r=0.263,P=0.027),与性别、年龄、吸烟、饮酒、学历的相关性均无统计学意义(P0.05)。结果表明,胃黏膜寄居的真菌存在多样性,且真菌阳性率与病理损害程度存在相关性。     

A comparative review towards potential of microbial cells for heavy metal removal with emphasis on biosorption and bioaccumulation

The threat of heavy metal pollution to environmental health is getting worldwide attention due to their persistence and non-biodegradable nature. Ineffectiveness of various physicochemical methods due to economical and technical constraints resulted in the search for a cost-effective and eco-friendly biological technique for heavy metal removal from the environment. The two effective biotic methods used are biosorption and bioaccumulation. A comparison between these two processes demonstrated that biosorption is a better heavy metal removal process than bioaccumulation. This is due to the intoxication of heavy metal by inhibiting their entry into the microbial cell. Genes and enzymes related to bioremoval process are also discussed. On comparing the removal rate, bacteria are surpassed by algae and fungi. The aim of this review is to understand the biotic processes and to compare their metal removal efficiency.     

Fungal flora on board the Mir-Space Station, identification by morphological features and ribosomal DNA sequences

This report is on the morphological and molecular biological identification, using 18S- and ITS1-rDNA sequences, of the "space fungi" isolated on board the Russian Mir-Space Station as the major constituents of the fungal flora. The six fungal strains were isolated from air by using an air sampler or from condensation. Strains were identified as Penicillium chrysogenum, Aspergillus versicolor, or Penicillium sp. by both methods. The species of space fungi were common saprophytic fungi in our living environment, potential pathogens, and allergens. This study concluded that the environment on board the space station Mir allows the growth of potentially pathogenic fungi as true in residential areas on the earth. Therefore, to prevent infection or other health disorders caused by these fungi, easy and reliable methods should be established to survey the fungal flora in a space station.     

Further advances in orchid mycorrhizal research

Orchid mycorrhizas are mutualistic interactions between fungi and members of the Orchidaceae, the world’s largest plant family. The majority of the world’s orchids are photosynthetic, a small number of species are myco-heterotrophic throughout their lifetime, and recent research indicates a third mode (mixotrophy) whereby green orchids supplement their photosynthetically fixed carbon with carbon derived from their mycorrhizal fungus. Molecular identification studies of orchid-associated fungi indicate a wide range of fungi might be orchid mycobionts, show common fungal taxa across the globe and support the view that some orchids have specific fungal interactions. Confirmation of mycorrhizal status requires isolation of the fungi and restoration of functional mycorrhizas. New methods may now be used to store orchid-associated fungi and store and germinate seed, leading to more efficient culture of orchid species. However, many orchid mycorrhizas must be synthesised before conservation of these associations can be attempted in the field. Further gene expression studies of orchid mycorrhizas are needed to better understand the establishment and maintenance of the interaction. These data will add to efforts to conserve this diverse and valuable association.