Cladistic revision of talitroidean amphipods (Crustacea, Gammaridea), with a proposal of a new classification

This paper reports the results of a cladistic analysis of the Talitroidea s.l. , which includes about 400 species, in 96 genera distributed in 10 families. The analysis was performed using paup and was based on a character matrix of 34 terminal taxa and 43 morphological characters. Four most parsimonious trees were obtained with 175 steps (CI = 0.617, RI = 0.736). A strict consensus tree was calculated and the following general conclusions were reached. The superfamily Talitroidea is elevated herein as infraorder Talitrida, which is subdivided into three main branches: a small clade formed by Kuria and Micropythia (the Kurioidea), and two larger groups maintained as distinct superfamilies (Phliantoidea, including six families, and Talitroidea s.s ., including four). Within the Talitroidea s.s. , the following taxonomic changes are proposed: Hyalellidae and Najnidae are synonymized with Dogielinotidae, and treated as subfamilies; a new family rank is proposed for the Chiltoniinae.     

Phylogeny of Holothuroidea (Echinodermata) inferred from morphology

Holothuroids, or sea cucumbers, are an abundant and diverse group of echinoderms with over 1400 species occurring from the intertidal to the deepest oceanic trenches. In this study, we report the first phylogeny of this class, based on a cladistic analysis of 47 morphological characters. We introduce several previously unconsidered synapomorphic characters, examine the relationships between representatives from all extant families and assess the assumptions of monophyly for each order and subclass. Maximum-parsimony analyses using three rooting methods recovered well-supported and identical topologies when two small and apparently derived families, Eupyrgidae and Ge-phyrothuriidae, were removed. The results suggest that the higher-level arrangement of Holothuroidea warrants a considerable revision. Apodida was sister to the other holothuroids. The monophyly of Dendrochirotida was not supported and the group may be paraphyletic. A randomization test using Wills' gap excess ratio found significant congruence between the phylogeny and the stratigraphic record of fossil members, suggesting that the fossil record of holothuroids is not as incomplete as is often stated. The fossil-calibrated tree indicated that several groups of holothuroids survived the end-Permian mass extinction and that the clade composed of Dendrochirotida, Dactylochirotida, Aspidochirotida and Molpadiida rapidly radiated during the Triassic.     

A reappraisal of orders and families within the subclass Chaetothyriomycetidae (Eurotiomycetes,Ascomycota)

The subclass Chaetothyriomycetidae (Eurotiomycetes, Ascomycota) is an assemblage of ecologically diverse species, ranging from mutualistic lichenised fungi to human opportunistic pathogens. Recent contributions from molecular studies have changed our understanding of the composition of this subclass. Among others, ant-associated fungi, deep-sea fungi and bryophilous fungi were also shown to belong to this group of ascomycetes. The delimitation of orders and families within this subclass has not previously been re-assessed using a broad phylogenetic study and the phylogenetic position of some taxa such as the lichenised family Celotheliaceae or the Chaetothyrialean bryophilous fungi is still unclear. In our study, we assemble new and published sequences from 132 taxa and reconstruct phylogenetic relationships using four markers (nuLSU, nuSSU, mtSSU and RPB1). Results highlight several shortfalls in the current classification of this subclass, mainly due to un-assigned paraphyletic taxa. The family Epibryaceae is therefore described to circumscribe a previously un-assigned lineage. Celotheliales ad int. is suggested for the lineage including the lichen genus Celothelium and various plant pathogens. The delimitation of the family Trichomeriaceae is also broadened to include the genus Knufia and some anamorphic taxa. As defined here, Chaetothyriomycetidae includes four orders (Celotheliales ad int., Chaetothyriales, Pyrenulales, and Verrucariales) and ten families (Adelococcaceae, Celotheliaceae, Chaetothyriaceae, Cyphellophoraceae, Epibryaceae fam. nov., Herpotrichiellaceae, Pyrenulaceae, Requienellaceae, Trichomeriaceae, and Verrucariaceae).     

HIGHER SYSTEMATICS OF SCORPIONS FROM THE CRATO FORMATION, LOWER CRETACEOUS OF BRAZIL

Abstract:  Several new specimens of Protoischnurus axelrodorum Carvalho and Lourenço and Araripescorpius ligabuei Campos from the Crato Formation, Brazil, are described. The preservation and recognition of new morphological features allows a re-diagnosis of both species and a modification of their familial placement. Protoischnurus axelrodorum is the oldest species belonging to the scorpionoid family Hemiscorpiidae Pocock (= Ischnuridae Simon; = Liochelidae Fet and Bechly) and the first Cretaceous record. It was originally placed in the extinct family Protoischnuridae Carvalho and Lourenço, which is here synonymized with Hemiscorpiidae. Araripescorpius ligabuei, now assigned to Chactidae Pocock, is the first chactoid recorded for the Cretaceous of Brazil. These findings confirm that the lineages of two modern families date back at least to the Early Cretaceous and, considering their current distribution, were probably present before the break-up of the supercontinent Gondwana. Palaeoecological inferences indicate the presence of tropical habitats in the vicinity of the Crato lake/lagoon.     

Phylogeny of the suborder Psocomorpha: congruence and incongruence between morphology and molecular data (Insecta: Psocodea: ‘Psocoptera’)

The largest suborder of bark lice (Insecta: Psocodea: ‘Psocoptera’) is Psocomorpha, which includes over 3600 described species. We estimated the phylogeny of this major group with family‐level taxon sampling using multiple gene markers, including both nuclear and mitochondrial ribosomal RNA and protein‐coding genes. Monophyly of the suborder was strongly supported, and monophyly of three of four previously recognized infraorders (Caeciliusetae, Epipsocetae, and Psocetae) was also strongly supported. In contrast, monophyly of the infraorder Homilopsocidea was not supported. Based on the phylogeny, we divided Homilopsocidea into three independent infraorders: Archipsocetae, Philotarsetae, and Homilopsocidea. Except for a few cases, previously recognized families were recovered as monophyletic. To establish a classification more congruent with the phylogeny, we synonymized the families Bryopsocidae (with Zelandopsocinae of Pseudocaeciliidae), Calopsocidae (with Pseudocaeciliidae), and Neurostigmatidae (with Epipsocidae). Monophyly of Elipsocidae, Lachesillidae, and Mesopsocidae was not supported, but the monophyly of these families could not be rejected statistically, so they are tentatively maintained as valid families. The molecular tree was compared with a morphological phylogeny estimated previously. Sources of congruence and incongruence exist and the utility of the morphological data for phylogenetic estimation is evaluated. © 2014 The Linnean Society of London     

The ochotonids of Eurasia: Biochronology and taxonomic diversity

The ochotonid faunas of Eurasia and North America from the Oligocene to the present time are reviewed. The pika family (Ochotonidae Thomas 1897) belongs to the order Lagomorpha, which includes five families: Ochotonidae, Mimotonidae Li 1978, Leporidae Fischer 1817 (hares), Palaeolagidae Dice 1929, and Prolagidae Gureev 1960. The family Ochotonidae consists of two subfamilies: Sinolagomyinae Gureev, 1960 and Ochotoninae Thomas, 1897 and comprises a total of 17 genera. Originating in Central Asia at the beginning of the Late Oligocene, pikas flourished during the Late Oligocene. The highest taxonomic diversity of pikas can be found in the Miocene and Pliocene; towards the Pleistocene, the ochotonid fauna declined. Only one genus, Ochotona, remained extant by the end of the Pleistocene. The genus includes a total of 38 known extinct taxa and 28 extant species.     

Review of the family Anthribidae (Coleoptera) from the Jurassic of Karatau: Subfamily Protoscelinae. Genus Protoscelis Medvedev

The subfamily Protoscelinae from the Middle to Late Jurassic of Karatau is transferred from the family Chrysomelidae to the family Anthribidae. The genus Protoscelis, comprising five species, is reviewed. Males and females of the genus are described and keys to the identification of male and female specimens are provided. The new species P. medvedevi sp. nov. is described. The generic names Cerambyomima Medvedev, 1968, Pseudomegamerus Medvedev, 1968 and Protosceloides Medvedev, 1968 are synonymized under Protoscelis Medvedev, 1968, and the species Pseudomegamerus grandis Medvedev, 1968 is synonymized under Cerambyomima longicornis Medvedev, 1968. The new combinations Protoscelis longicornis (Medvedev, 1968) comb. nov. and P. nitidicornis (Medvedev, 1968) comb. nov. are established.     

Systematics of fossil platanoids and hamamelids

The data on fossil platanoids and hamamelids are generalized, their morphological diversity and probable patterns of the establishment of the extant families Platanaceae and Hamamelidaceae are analyzed. It is shown that morphological and epidermal characters of polymorphic leaves of typical platanoid appearance were formed in the Late Albian and remained essentially invariable to the present time, indicating the morphological stasis of these leaves combined with a wide variation range. In view of association with essentially different reproductive structures, it is proposed to classify these leaves by the morphological system irrespective of the natural system of angiosperms. A new system of extinct platanoids and hamamelids, which is based on reproductive structures and includes two orders, Hamamelidales and Sarbaicarpales ordo. nov., is proposed. Hamamelidales comprises two extant families, Platanaceae (with the subfamilies Platanoideae subfam. nov. and Gynoplatananthoideae subfam. nov.) and Hamamelidaceae, and the extinct family Bogutchanthaceae fam. nov.; the new extinct order Sarbaicarpales ordo. nov. consists of two new families, Sarbaicarpaceae fam. nov. and Kasicarpaceae fam. nov. In a system of flowering plants that is based on molecular data, the families Platanaceae and Hamamelidaceae are assigned to remote orders, excluding close relationship (APG, 2003). At the same time, the system of APG II often contradicts morphological and paleontological data, while traditional ideas of morphologists concerning the common origin of these families have recently been supported by paleobotanic evidence. Probable origin of the families Platanaceae and Hamamelidaceae from a common polymorphic ancestral group is discussed.     

Hidden among Sea Anemones: The First Comprehensive Phylogenetic Reconstruction of the Order Actiniaria (Cnidaria,Anthozoa, Hexacorallia) Reveals a Novel Group of Hexacorals

Sea anemones (order Actiniaria) are among the most diverse and successful members of the anthozoan subclass Hexacorallia, occupying benthic marine habitats across all depths and latitudes. Actiniaria comprises approximately 1,200 species of solitary and skeleton-less polyps and lacks any anatomical synapomorphy. Although monophyly is anticipated based on higher-level molecular phylogenies of Cnidaria, to date, monophyly has not been explicitly tested and at least some hypotheses on the diversification of Hexacorallia have suggested that actiniarians are para- or poly-phyletic. Published phylogenies have demonstrated the inadequacy of existing morphological-based classifications within Actiniaria. Superfamilial groups and most families and genera that have been rigorously studied are not monophyletic, indicating conflict with the current hierarchical classification. We test the monophyly of Actiniaria using two nuclear and three mitochondrial genes with multiple analytical methods. These analyses are the first to include representatives of all three currently-recognized suborders within Actiniaria. We do not recover Actiniaria as a monophyletic clade: the deep-sea anemone Boloceroides daphneae, previously included within the infraorder Boloceroidaria, is resolved outside of Actiniaria in several of the analyses. We erect a new genus and family for B. daphneae, and rank this taxon incerti ordinis. Based on our comprehensive phylogeny, we propose a new formal higher-level classification for Actiniaria composed of only two suborders, Anenthemonae and Enthemonae. Suborder Anenthemonae includes actiniarians with a unique arrangement of mesenteries (members of Edwardsiidae and former suborder Endocoelantheae). Suborder Enthemonae includes actiniarians with the typical arrangement of mesenteries for actiniarians (members of former suborders Protantheae, Ptychodacteae, and Nynantheae and subgroups therein). We also erect subgroups within these two newly-erected suborders. Although some relationships among these newly-defined groups are still ambiguous, morphological and molecular results are consistent enough to proceed with a new higher-level classification and to discuss the putative functional and evolutionary significance of several morphological attributes within Actiniaria.     

Grass-fly larvae (Diptera,Chloropidae): Diversity,habitats, and feeding specializations

The fly family Chloropidae belongs to the higher Diptera series Acalyptratae. It is distributed worldwide and globally comprises 200 genera and about 3000 species in 4 subfamilies: Oscinellinae, Siphonellopsinae, Rhodesiellinae, and Chloropinae. In the fossil record, Chloropidae are known since the Oligocene, with 2 genera found in Baltic amber: one extinct, the other recent. The family includes several important agricultural pests (frit flies, gout flies, Meromyza, seed pests) which injure corn. The feeding preferences of chloropid larvae vary strongly: there are saprophages in the broad sense, true phytophages using both woody and grassy plants (mainly monocots), predators on egg masses of insects and spiders, as well as on scale insects and aphids, and ectoparasites of frogs. Among the 100 families of monocots (Liliopsida), only 11 include species serving as food plants for chloropid larvae. The greatest diversity of habitats and feeding types is observed in the subfamily Oscinellinae. The most advanced subfamily Chloropinae includes mostly phytophagous larvae. A possible scenario of ecological evolution within the family is briefly discussed.     

Sea Cucumbers Triterpene Glycosides, the Recent Progress in Structural Elucidation and Chemotaxonomy

Triterpene glycosides are characteristic metabolites of sea cucumbers (Holothurioidea, Echinodermata). Majority of the glycosides belong to holostane type (lanostane derivatives with 18(20)-lactone). Carbohydrate chains of these glycosides contain xylose, glucose, quinovose, 3-O-methylglucose and 3-O-methyl sylose. During the last 5 years, main investigations were focused on holothurians belonging to the order Dendrochirotida collected in the North Pacific, North Atlantic, Antarctic and in subtropical waters. The glycosides of holothurians belonging to the order Aspidochirotida have also been studied. The most uncommon structural features of carbohydrate chains of new glycosides were: (1) the presence of quinovose as fifth terminal monosaccharide unit and the presence of two quinovose residues; (2) the presence of glucose instead of common xylose as fifth terminal monosaccharide unit; (3) trisaccharide carbohydrate chain; (4) the presence of two 3-O-methylxylose terminal monosaccharide units; (5) the presence of sulfate group at C-3 of quinovose residue. New glycosides without lactone or with 18(16)-lactone and having shortened side chains have also been isolated. The presence of 17α and 12α-hydroxyls, which are characteristic for glycosides from holothurians belonging to the family Holothuriidae (Aspidochirotida) in glycosides of dendrochirotids confirms parallel and relatively independent character of evolution of glycosides. All three families belonging to the order Aspidochirotida: Holothuriidae, Stichopodidae and Synallactidae have similar and parallel trends in evolution of the glycosides carbohydrate chains, namely from non-sulfated hexaosides to sulfated tetraosides. Sets of aglycones in glycosides from holothurians belonging to the genus Cucumaria (Cucumariidae, Dendrochirotida) are specific for each species. The carbohydrate chains are similar in all representatives of the genus Cucumaria.     

Phylogenetic relationships among families of Gadiformes (Teleostei, Paracanthopterygii) based on nuclear and mitochondrial data

Phylogenetic hypotheses among Gadiformes fishes at the suborder, family, and subfamily levels are controversial. To address this problem, we analyze nuclear and mitochondrial DNA (mtDNA) sequences for the most extensive taxonomic sampling compiled to date, representing all of the recognized families and subfamilies in the order (except the monotypic family Lyconidae). Our study sampled 117 species from 46 genera, comprising around 20% of the species described for the order (more than 60% of all genera in the order) and produced 2740 bp of DNA sequence data for each species. Our analysis was successful in confirming the monophyly of Gadiformes and most of the proposed families for the order, but alternative hypotheses of sister-group relationships among families were poorly resolved. Our results are consistent with dividing Gadiformes into 12 families in three suborders, Muraenolepidoidei, Macrouroidei, and Gadoidei. Muraenolepidoidei contains the single family Muraenolepididae. The suborder Macrouroidei includes at least three families: Macrouridae, Macruronidae and Steindachneriidae. Macrouridae is deeply divided into two well-supported subfamilies: Macrourinae and Bathygadinae, suggesting that Bathygadinae may be ranked at the family level. The suborder Gadoidei includes the families: Merlucciidae, Melanonidae, Euclichthyidae, Gadidae, Ranicipitidae, and Bregmacerotidae. Additionally, Trachyrincinae could be ranked at family level including two subfamilies: Trachyrincinae and Macrouroidinae within Gadoidei. Further taxonomic sampling and sequencing efforts are needed in order to corroborate these relationships.     

Comprehensive phylogeny of the Cleroidea (Coleoptera: Cucujiformia)

The first thorough molecular phylogeny of the superfamily Cleroidea, represented by 377 taxa, and the first with an emphasis on Trogossitidae, was undertaken. Maximum likelihood and Bayesian analyses were performed on a four‐gene dataset (18S, 28S, cox1, cytb) of 395 taxa (along with 18 outgroups), including all 16 currently recognized families of Cleroidea and all current and formerly recognized tribes of Trogossitidae. The superfamily as a whole received strong support in Bayesian analyses. On the basis of phylogenetic results, 18 families in Cleroidea are recognized, including three taxa elevated to family for the first time and two reinstated families. The former tribe Rentoniini (Trogossitidae: Peltinae) was strongly supported as a monophyletic group apart from the remainder of Trogossitidae, and is herein elevated to family status, Rentoniidae stat.n. Protopeltis was also found to be an isolated lineage and becomes Protopeltidae stat.n. Peltini + Larinotini were recovered as a weakly supported sister grouping; Peltini (including only Peltis) becomes Peltidae stat.rest. The trogossitid subfamily Lophocaterinae, to the exclusion of Decamerini, formed a clade which is here designated Lophocateridae stat.rest. and sensu n. The Trogossitinae tribes Calityini, Egoliini (represented by Egolia) and Larinotini were recovered apart from core Trogossitidae but showed no strong affinities to other taxa or congruence between analyses; they are here conservatively retained in Trogossitidae as Calityinae stat.rest. , Egoliinae stat.rest. and Larinotinae stat.rest. The genus Thymalus of the peltine tribe Thymalini was indicated with moderate to strong support as the sister group of the Decamerini (Trogossitidae: Lophocaterinae); together these represent Thymalidae stat.n. and sensu n. with subfamilies Decamerinae stat.rest. ( new placement ) and Thymalinae stat.n. The remainder of Trogossitinae, the tribes Trogossitini and Gymnochilini, formed a well‐supported clade which comprises the Trogossitidae: Trogossitinae sensu n. The tribe Gymnochilini syn.n. is synonymized with Trogossitini. The monotypic family Phloiophilidae was recovered, contradicting a recent placement within Trogossitidae. The melyrid lineage was recovered with moderate (maximum likelihood) to strong (Bayesian analyses) support and includes the families Phycosecidae, Rhadalidae, Mauroniscidae, Prionoceridae and Melyridae (including Dasytidae and Malachiidae). The genus Dasyrhadus is tentatively transferred from Rhadalidae to Mauroniscidae. The genus Gietella, once proposed as a distinct family but recently placed within Dasytidae, was recovered as strongly sister to Rhadalidae sensu n. , and we transfer it to that family as Gietellinae new placement . Attalomiminae (formerly Attalomimidae) syn.n. is synonymized with Melyridae: Malachiinae: Lemphini sensu n. Melyridae sensu n. includes only Dasytinae, Malachiinae and Melyrinae. Metaxina is returned to the Chaetosomatidae sensu n. , of which Metaxinidae syn.n. becomes a junior synonym. Resolution within Cleridae was generally poor, but a broadly defined Korynetinae stat rest. + Epiclininae received high support (Bayesian analyses). Outside of Trogossitidae, the main focus of this study, major rearrangements of the classification of Cleroidea were not undertaken, despite evidence indicating such changes are needed.     

Parallelisms in the evolution of sea cucumbers (Echinodermata: Holothuroidea)

The importance of taking into account parallelisms in the evolution of morphological characters is analyzed for the taxonomy of the class Holothuroidea. The establishment of the order Dactylochirotida and classification of the order Elasipodida serve as examples to illustrate insufficient appreciation of parallelisms in Holothuroidea. The following characters, evolving independently in different groups of sea cucumbers, are considered: a stout skeleton, reduction of the calcareous ring and the body wall sclerites; similarity of body shape; similarity in the shape of tentacles; reduction in the number of tentacles from 12 to 10 in different fam-ilies and subfamilies of the order Synaptida. Based on the analysis of morphological and molecular data, the family Deimatidae is transferred from the order Elasipodida to the order Aspidochirotida. It is hypothesized that the concave cup-shaped sclerites with three to five rays occurring in the family Laetmogonidae (order Elasipodida) are of paedomorphic origin and correspond to the early growth stages of the laetmogonid wheels; the concave cross-shaped sclerites of the families Elpidiidae and Psychropotidae may have originated from laetmogonid concave cup-shaped sclerites. Emended diagnosis of the order Elasipodida is proposed. The family Vaneyellidae previously synonymized by the author with the family Cucumariidae is reestablished, and its emended diagnosis is also proposed.     

Molecular phylogeny of the cyrtophorid ciliates (Protozoa, Ciliophora, Phyllopharyngea)

Evolutionary relationships of cyrtophorian ciliates are poorly known because molecular data of most groups within this subclass are lacking. In the present work, the SS rRNA genes belonging to 17 genera, 7 families of Cyrtophoria were sequenced and phylogenetic trees were constructed to assess their inter-generic relationships. The results indicated: (1) the assignment of cyrtophorians into two orders is consistently confirmed in all topologies; (2) the order Dysteriida is an outlined monophyletic assemblage while Chlamydodontida is paraphyletic with three separate monophyletic families; (3) Microxysma, which is currently assigned within the family Hartmannulidae, should be transferred to the family Dysteriidae; (4) the systematic position of Plesiotrichopidae remains unclear, yet the two genera that were placed in this family before, Pithites and Trochochilodon, should be transferred to Chlamydodontida; (5) a new family, Pithitidae n. fam., based on the type genus Pithites was suggested; and (6) the sequence of Isochona sp., the only available data of Chonotrichia so far, is probably from a misidentified species. In addition, three group I introns of SS rRNA gene were discovered in Aegyriana oliva, among which Aol.S516 is the first IE group intron reported in ciliates.     

Further insights into the highly derived haptorids (Ciliophora,Litostomatea): Phylogeny based on multigene data

Evolutionary relationships of taxa within the ciliate subclass Haptoria are poorly understood. In this study, we broaden the taxon sampling by adding 14 small subunit ribosomal RNA gene sequences, 13 large subunit ribosomal RNA gene sequences and 13 ITS1‐5.8S‐ITS2 gene sequences of haptorians. This includes the first molecular data from two genera, Pseudotrachelocerca Song, 1990, and Foissnerides Song & Wilbert, 1989. Phylogenies inferred from the three individual genes and concatenated data sets show that: (i) the subclass Haptoria could be a multiphyletic complex with about up to four main clades while “interrupted” by some intermingled with the related subclasses Rhynchostomatia, Trichostomatia and some incertae sedis; (ii) the genus Pseudotrachelocerca Song, 1990, is clearly separated from Litostomatea and clusters within an assemblage comprising the classes Prostomatea, Colpodea and Plagiopylea; (iii) both morphological evidence and molecular evidence indicate that the genus Foissnerides should be transferred from family Trachelophyllidae to Pseudoholophryidae; (iv) the validity of the order Helicoprorodontida Grain, 1994, and its monophyly is strongly supported; (5) the family Chaeneidae does not belong to the order Lacrymarida but represents a distinct clade in the subclass Haptoria.     

Phylogeny and the fossil record of the Helophoridae reveal Jurassic origin of extant hydrophiloid lineages (Coleoptera: Polyphaga)

We performed a phylogenetic analysis focused on the hydrophiloid family Helophoridae (Coleoptera: Polyphaga) in order to test the phylogenetic position of selected Mesozoic fossils assigned to the Hydrophiloidea. The analysis is based on 92 characters of larvae and adults, and includes all extant subgenera of Helophorus and representatives of all other extant hydrophiloid families. Based on this analysis, we provide additional evidence for the monophyly of the helophorid lineage containing the families Helophoridae, Georissidae and Epimetopidae, as well as the first hypothesis on the phylogenetic relationships within Helophorus, revealing three main clades: Lihelophorus, Rhopalohelophorus and the clade of sculptured small subgenera; the subgenera Helophorus s.str., Gephelophorus, Trichohelophorus and Transithelophorus are recognized as paraphyletic or polyphyletic. Inclusion of fossil species in the analysis reveals the Mesozoic genera Hydrophilopsia Ponomarenko, Laetopsia Fiká?ek et al. (adult forms) and Cretotaenia Ponomarenko (larval form) as basal extinct clades of the helophorid lineage, the former genus Mesosperchus Ponomarenko as containing probable stem taxa of Helophorus and the former genus Mesohelophorus Ponomarenko as a member of the Helophorus clade containing extant sculptured subgenera. The extant subgenus Thaumhelophorus syn.nov. is synonymized with Rhopalohelophorus. Our results show that the family Helophoridae may be dated back to the late Jurassic (c. 150 Ma) and the extant clades of Helophorus back to the Early Cretaceous (c. 136 Ma). The basal groups of Helophorus and the supposed basal extinct lineages of the helophorid lineages are shown to be aquatic as adults. A single origin of trichobothria and ventral hydrophobic pubescence in the common ancestor of the Hydrophiloidea is hypothesized, indicating ancestral aquatic habits in the adult stage for the whole Hydrophiloidea.     

HIRNANTIAN (LATEST ORDOVICIAN) GRAPTOLITES FROM THE UPPER YANGTZE REGION, CHINA

Abstract:  The Upper Yangtze region yields a Hirnantian (latest Ordovician) graptolite fauna that includes 41 species assigned to 13 genera. This fauna is particularly important for understanding the Late Ordovician mass extinction event because it is the most diverse known from this interval. In addition, it records the survival, well into the Hirnantian, of many taxa of the Dicranograptidae-Diplograptidae-Orthograptidae (DDO) fauna, which was previously regarded as having gone extinct at the beginning of the Hirnantian. Taxa exhibiting six different astogenetic patterns, including taxa with reclined stipes, scandent, biserial, full-periderm and 'archiretiolitid' rhabdosome forms occur in the lower Normalograptus extraordinarius-N. ojsuensis Biozone. In contrast, in the upper N. persculptus Biozone only four genera remain, all but one of which are Normalograptidae: scandent and biserial taxa with Pattern H astogeny. Normalograptids are the dominant form of the succeeding, lower Rhuddanian, faunas. The Yangtze faunas also document the early expansion of normalograptids coeval with the decline of the DDO fauna. Many previously identified species considered endemic to China have been synonymized; 24 of the 41 species recorded here have been recognized elsewhere. No new taxa are described.     

Cultivation of globally distributed soil bacteria from phylogenetic lineages previously only detected in cultivation-independent surveys

The culturability of microorganisms in a 10 cm core of an Australian pasture soil was investigated using a minimal agar medium with xylan as the growth substrate. Culturability decreased with increasing depth, from a maximum of 19% of the total microscopically countable cells in the 0-2 cm section to 2.4% in the 8-10 cm section. Seventy-one isolates from the core were identified by comparative 16S rRNA gene sequence analysis. Many of these isolates belong to groups of globally distributed soil bacteria, including well-characterized families of the classes Alphaproteobacteria and Betaproteobacteria, and of the subclass Actinobacteridae. Other isolates belong to groups with few or no cultivated representatives: 10 isolates in two subdivisions of the phylum Acidobacteria, five isolates in a new order and nine isolates in a new family of the class Alphaproteobacteria, two isolates in a new order of the class Gammaproteobacteria, three isolates in two new families of the subclass Actinobacteridae, and two isolates in the subclass Rubrobacteridae. These new isolates represent the first laboratory cultures able to be assigned to some of these groups and greatly increase the number of cultivated strains known for others. This demonstrates that a minimal change in cultivation strategy (using a polymeric growth substrate and longer incubation times) can result in the isolation of globally distributed but previously uncultured phylogenetically novel soil bacteria.     

钙质红藻化石的主要类群特征及演化

钙质红藻是指可以发生生物钙化作用在其细胞壁上沉淀碳酸钙的红藻。钙质红藻可以保存为化石,是红藻古生物研究中的重要类群,具有重要的生态意义,但以往的研究对钙质红藻类群的系统分类及地史分布缺乏清晰认识。本文详细综述了钙质红藻化石的系统分类,归属于红藻门(Rhodophyta)红藻纲(Rhodophyceae)的4个目7个科,分别为珊瑚藻亚纲(Corallinophycidae)珊瑚藻目(Corallinales)的珊瑚藻科(Corallinaceae)、石叶藻科(Lithophyllaceae)、宽珊藻科(Mastophoraceae)和管孔藻科(Solenoporaceae),混石藻目(Hapalidiales)的混石藻科(Hapalidiaceae),孢石藻目(Sporolithales)的孢石藻科(Sporolithaceae)以及真红藻亚纲(Florideophycidae)耳壳藻目(Peyssonneliales)的耳壳藻科(Peyssonneliaceae)。最早的钙质红藻为管孔藻科,出现于中奥陶世,于中新世灭绝。珊瑚藻科最早出现于晚志留世并于白垩纪辐射演化至今,其他科均于白垩纪...