Rationally designed fluorescently labeled sulfate-binding protein mutants: evaluation in the development of a sensing system for sulfate

Periplasmic binding proteins from E. coli undergo large conformational changes upon binding their respective ligands. By attaching a fluorescent probe at rationally selected unique sites on the protein, these conformational changes in the protein can be monitored by measuring the changes in fluorescence intensity of the probe which allow the development of reagentless sensing systems for their corresponding ligands. In this work, we evaluated several sites on bacterial periplasmic sulfate-binding protein (SBP) for attachment of a fluorescent probe and rationally designed a reagentless sensing system for sulfate. Eight different mutants of SBP were prepared by employing the polymerase chain reaction (PCR) to introduce a unique cysteine residue at a specific location on the protein. The sites Gly55, Ser90, Ser129, Ala140, Leu145, Ser171, Val181, and Gly186 were chosen for mutagenesis by studying the three-dimensional X-ray crystal structure of SBP. An environment-sensitive fluorescent probe (MDCC) was then attached site-specifically to the protein through the sulfhydryl group of the unique cysteine residue introduced. Each fluorescent probe-conjugated SBP mutant was characterized in terms of its fluorescence properties and Ser171 was determined to be the best site for the attachment of the fluorescent probe that would allow for the development of a reagentless sensing system for sulfate. Three different environment-sensitive fluorescent probes (1,5-IAEDANS, MDCC, and acylodan) were studied with the SBP171 mutant protein. A calibration curve for sulfate was constructed using the labeled protein and relating the change in the fluorescence intensity with the amount of sulfate present in the sample. The detection limit for sulfate was found to be in the submicromolar range using this system. The selectivity of the sensing system was demonstrated by evaluating its response to other anions. A fast and selective sensing system with detection limits for sulfate in the submicromolar range was developed.     

一种在哺乳动物细胞中研究蛋白分子转录激活活性系统的建立

为了在哺乳动物细胞中建立一套用于研究蛋白分子转录激活活性的系统,首先以质粒pTe-Off和真核表达载体pCDNA3.1B(-)/myc-his为基础,分别构建重组质粒pZHO1(用于插入待测基因并作为该系统的阴性对照）,pZHO2（用于作阳性对照）,此外,该系统还包括质粒pTRE-luc(编码Firefly荧光素酶报道基因）和质粒pRL-TK(编码Renilla荧光素酶基因,用作内参对照）,为验证该系统的可行性,分别将质粒pZHO1,pZHO2,pZHO3(编码p53分子N端转灵激活区73个氨基酸片段,作为实验组）与质粒pTRE-luc和pRL-TK共轨染至C4－2,MCF－7,COS7 3种不同的细胞株中,通过检测各转染组细胞中Firefly荧光素酶相对活性的大小来判断该系统的可行性,结果表明,所构建的系统可以在哺乳动物细胞中检测目的分子的转录激活活性。     

Kinetic analysis and modeling of firefly luciferase as a quantitative reporter gene in live mammalian cells

Firefly luciferase has proven to be a highly sensitive and quantitative reporter gene for studying gene delivery and regulation, and its recent use in live cells and organisms promises to further expand its utility. However, the intracellular behavior and properties of the enzyme are not well characterized. Specifically, information on the intracellular kinetics and stability of luciferase activity is necessary for real-time luminescence counts from live cells to be quantitatively meaningful. Here, we report a dynamic analysis of luciferase activity in the context of living mammalian cells. We have determined the relative light units measured in living cells to be proportional to that found in cell lysate. We have also calculated the K(m) of luciferase in living cells to be approximately 1 mM, a value much higher than the 10 microM found for pure enzyme in vitro. In addition, a 2-hour half-life of luciferase activity in live cells was measured in real time. Finally, we have modeled luciferase activity in live cells for the purposes of understanding and translating the luciferase signal into a more effective metric of gene expression and cell behavior.     

Protein kinase A activity at the endoplasmic reticulum surface is responsible for augmentation of human ether-a-go-go-related gene product (HERG)

Human ether-a-go-go-related gene product (HERG) is a cardiac potassium channel commonly implicated in the pathogenesis of the long QT syndrome, type 2 (LQT2). LQT2 mutations typically have incomplete penetrance and affect individuals at various stages of their lives; this may mirror variations in intracellular signaling and HERG regulation. Previous work showed that sustained protein kinase A (PKA) activity augments HERG protein abundance by a mechanism that includes enhanced protein translation. To investigate the subcellular site of this regulation, we generated site-specific probes to the cytoplasmic surface of the endoplasmic reticulum (ER), the presumed locale of channel synthesis. Real-time FRET-based indicators demonstrated both cAMP and PKA activity at the ER. A PKA inhibitor targeted to the ER surface (termed p4PKIg) completely abolished PKA-mediated augmentation of HERG in HEK293 cells as well as rat neonatal cardiomyocytes. Immunofluorescence co-localization, targeted FRET-based PKA biosensors, phospho-specific antibodies, and in vivo phosphorylation experiments confirmed that p4PKIg is preferentially active at the ER surface rather than the plasma membrane. Rerouting this inhibitor to the outer mitochondrial membrane diminishes its ability to block cAMP-dependent HERG induction. Our results support a model where PKA-dependent regulation of HERG synthesis occurs at the ER surface. Furthermore, reagents generated for this study provide novel experimental tools to probe compartmentalized cAMP/PKA signaling within cells.     

Enhanced Beetle Luciferase for High-Resolution Bioluminescence Imaging

We developed an enhanced green-emitting luciferase (ELuc) to be used as a bioluminescence imaging (BLI) probe. ELuc exhibits a light signal in mammalian cells that is over 10-fold stronger than that of the firefly luciferase (FLuc), which is the most widely used luciferase reporter gene. We showed that ELuc produces a strong light signal in primary cells and tissues and that it enables the visualization of gene expression with high temporal resolution at the single-cell level. Moreover, we successfully imaged the nucleocytoplasmic shuttling of importin α by fusing ELuc at the intracellular level. These results demonstrate that the use of ELuc allows a BLI spatiotemporal resolution far greater than that provided by FLuc.     

XBP-1转录激活系统的构建

人X盒结合蛋白1(XBP-1)是CREB／ATF(cAMP应答元件结合蛋白／激活转录因子)转录因子家族中的一员,在很多癌细胞中高水平表达。将XBP-1两种剪切形式的编码序列分别克隆在pRC-lac真核载体上,构建成pRC-lac-XBP-1S和pRC-lac-XBP-1U重组质粒。Westem印迹分析表明,这两种XBP-1形式在哺乳动物细胞中都得到了表达。瞬时转染人胚胎肾细胞293T,用荧光素酶报告基因检测这两种剪切形式的转录活性。结果显示,pRC-lac-XBP-1S和pRC-lac-XBP-1U在293T细胞中均有活性,pRC-lac-XBP-1U的活性约是空载体的65倍,pRC-lac-XBP-IS的活性约是空载体的3倍。成功构建了xBP-1的转录激活系统,为进一步了解XBp-1在各种疾病中的作用奠定了基础。