茶树SBP box转录因子的比较基因组学与遗传分析

SQUAMOSA启动子结合蛋白(SBP box)是植物特异性转录因子,在植物生长发育中发挥重要作用。该研究利用生物信息学分析方法,对不同‘铁观音’、‘黄棪’、‘舒茶早’和‘龙井43’茶树基因组的SBP基因进行鉴定和比较,通过qRT PCR技术分析CsTGY_SBP家族成员在不同茶树品种中的表达模式,为探究SBP基因在茶树杂种和亲本上的遗传规律提供参考。结果显示：(1)在茶树品种‘铁观音’、‘黄棪’、‘舒茶早’和‘龙井43’基因组中分别鉴定出21个、25个、24个和23个SBP家族基因。(2)系统进化树将其分为8个亚家族,共线性分析发现茶树和拟南芥、葡萄的SBP基因共线性关系与水稻相比更强,同物种内发现‘铁观音’与‘黄棪’的共线性关系更显著。(3)qRT PCR结果表明,CsTGY_SBP5、CsTGY_SBP9和CsTGY_SBP14在F₁‘金观音’中呈中亲表达的模式;大部分CsTGY_SBPs基因在F₁‘黄观音’呈低于双亲表达模式,CsTGY_SBP5和CsTGY_SBP8在F₁‘金牡丹’中显著高于亲本;CsTGY_SBP5、CsTGY_SBP7、CsTGY_SBP12、CsTGY_SBP16和CsTGY_SBP18在F₁‘紫玫瑰’中的表达量显著高于亲本,呈超高亲表达的模式;CsTGY_SBPs基因在F₁‘紫牡丹’中整体表达趋于亲本铁观音,在F₁‘瑞香’中整体呈现低于亲本‘黄棪’的表达模式。研究表明,CsTGY_SBP5在F₁‘金牡丹’和F₁‘紫玫瑰’中的表达均显著高于亲本,推测CsTGY_SBP5可能是茶树杂种优势的重要调控因子。     

不同苹果砧穗组合的生长及光合特性

以‘垂丝海棠’（Malus halliana）和‘平邑甜茶’（Malus hupehensis）为基砧,分别嫁接品种‘烟富6号’和‘长富2号’接穗,测定4种砧穗组合的嫁接亲和性、接穗生长量、光合与荧光参数及叶绿素含量（SPAD）,并用主成分分析法综合评价砧穗组合的优劣,探讨不同苹果砧穗组合嫁接苗的生长及光合特性,为西北盐碱地选择适宜的苹果砧木提供理论依据。结果表明：（1）4种砧穗组合中‘垂丝海棠/烟富6号’的上下口粗度比最接近1,嫁接亲和性最好。（2）整个生长期内,以‘垂丝海棠’为基砧的2个组合嫁接苗的生长量、净光合速率（P_n）、最大荧光（F_m）、PSⅡ最大光能转化率（F_v/F_m）均显著大于‘平邑甜茶’为基砧的组合,但其胞间CO₂浓度（C_i）及初始荧光（F₀）显著低于‘平邑甜茶’为基砧的组合;光化学猝灭系数（qP）在4种砧穗组合中无显著差异。（3）在8月份光照强度较高时,‘垂丝海棠/烟富6号’ 嫁接苗的气孔导度（G_s）高于其他砧穗组合;以‘垂丝海棠’为基砧的2个组合嫁接苗叶片的蒸腾速率（T_r）和相对叶绿素含量（SPAD）显著高于‘平邑甜茶’ 基砧组合。（4）根据主成分分析对各项指标进行综合评价,按照4个砧穗组合的综合得分由高到低依次为：‘垂丝海棠/烟富6号’、‘垂丝海棠/长富2号’、‘平邑甜茶/长富2号’、‘平邑甜茶/烟富6号’。研究发现,基砧‘垂丝海棠’的适应性优于‘平邑甜茶’,且‘垂丝海棠/烟富6号’砧穗组合的嫁接亲和性高,长势强,光合能力优,为甘肃中部地区适宜的砧穗组合。     

小麦TaWRKY47基因的克隆与表达分析

为了探究小麦WRKY基因的功能,该研究采用RT PCR方法,在小麦叶片组织中克隆WRKY基因,并对其进行生物信息学和不同逆境胁迫下的表达分析。结果表明：(1)成功克隆得到1个小麦WRKY基因,命名为TaWRKY47。(2)TaWRKY47基因开放阅读框长度为900 bp,编码299个氨基酸,含有一个WRKY保守结构域和一个C₂HC锌指结构域,属于WRKY基因家族的第Ⅲ类成员。(3)亚细胞定位分析结果显示,TaWRKY47蛋白定位于细胞核。(4)荧光定量PCR结果表明,TaWRKY47基因在小麦根、茎、叶、雄蕊和雌蕊中均有表达,其中在雌蕊中表达量最高,且受低温、干旱、盐、ABA和H₂O₂等胁迫表达增强,推测TaWRKY47基因参与了小麦的逆境胁迫过程。该研究结果为进一步研究TaWRKY47基因功能与抗逆机制奠定了理论基础。     

抗疫病加工型辣椒细胞质雄性不育恢复系的创制

为加快抗疫病加工型辣椒细胞质雄性不育(cytoplasmic male sterility,CMS)恢复系的创制,该试验以单生、长果自交系481 4 10为母本,以抗疫病的恢复系939 1和1021(1) 1为父本配制杂交组合,采用花药培养技术将抗疫病恢复系的Rf基因和抗疫病基因导入单生、长果自交系中,并利用分子标记辅助选择(molecular marker assisted selection, MAS)技术鉴定DH系(Double Haploid line)的Rf基因以及抗病性,进一步用室内苗期抗性鉴定的方法验证MAS筛选的含Rf DH系对疫病的抗性。结果表明：(1)花药培养的供体亲本(481 4 10×939 1)F₁诱导出22个胚状体,成苗后经倍性鉴定获得11个花培DH系;而由供体亲本［481 4 10×1021(1) 1］F₁获得 9个DH系。(2)分子标记CRF SCAR对花培DH系进行分子标记辅助选择验证结果表明,来自供体(481 4 10×939 1)F₁的DH系中有7个可扩增出870 bp的特异条带,占63.6%;而供体［481 4 10×1021(1) 1］F₁获得的DH系中则有8个能扩增出870 bp的特异条带,占88.9%。(3)分子标记FQ01/RQ01对DH系进行分子标记辅助选择筛选结果发现,来自供体(481 4 10×939 1)F₁的DH系有5个能扩增出717 bp的特异条带,占45.5%;而来自供体［481 4 10×1021(1) 1］F₁的DH系有4个可扩增出717 bp的特异条带,占44.4%。(4)MAS技术初步筛选到7个携带Rf的抗疫病DH系,分别命名为‘渝辣选3 2/3 3/3 5/7 1/7 5/7 6/7 9’;苗期抗性鉴定结果显示,7个DH系中5个DH系抗疫病,2个中抗疫病;农艺性状调查和测交实验表明,‘渝辣选3 2’和‘渝辣选7 1’是单生朝天椒、果实较长,味辣,均为CMS恢复系。该研究创制的2个DH系为利用辣椒CMS三系配套选育抗病新品种奠定了基础。     

7种秋海棠叶片斑纹结构及遗传特性分析

以7种(品种)秋海棠为材料,观察叶片斑区和非斑区组织结构、测定叶绿素含量及叶绿素荧光参数F_v/F_m值,分析叶片斑纹的形成原因及银点秋海棠点状斑的遗传特性。结果显示：(1)银点秋海棠、铺地秋海棠、假厚叶秋海棠、‘皮卡’和‘非洲丛林’叶片斑区的上表皮细胞与栅栏组织细胞间存在空隙,非斑区则没有空隙,彩纹秋海棠和‘虎斑’的斑区与非斑区上表皮细胞和栅栏组织细胞间均紧密相连。(2)7种(品种)秋海棠叶片斑区和非斑区都具有完整的叶绿体超微结构,类囊体膜丰富,基质和基粒片层清晰;银点秋海棠、假厚叶秋海棠、‘皮卡’和‘非洲丛林’斑区的叶绿素a、b及总叶绿素含量均低于非斑区,而铺地秋海棠斑区和非斑区差别不大;除假厚叶秋海棠的斑区叶绿素荧光参数F_v/F_m值小于非斑区外,其余6种秋海棠均为斑区高于非斑区。(3)银点秋海棠与无斑种类杂交,杂交后代叶片有斑和无斑的植株约为1∶1,而其自交后代中有斑和无斑的植株比例近3∶1。研究发现,银点秋海棠、铺地秋海棠、假厚叶秋海棠、‘皮卡’和‘非洲丛林’的叶斑属于空隙结构型,彩纹秋海棠和‘虎斑’叶斑属于色素型。银点秋海棠点状叶斑与无斑是1对可遗传的相对性状,白色点状斑为显性性状。     

转OvDREB2B基因陆地棉鉴定及其对水分渗透胁迫的分析

通过花粉管通道技术,以该实验室自育陆地棉品系TH₁和TH₂为材料,将诸葛菜(Orychophragmus vidaceus)抗逆转录因子OvDREB2B基因构建到植物表达载体后,导入棉花基因组,经卡那霉素筛选和分子鉴定表明目的基因已整合到棉花基因组中并表达。将T₁代转基因植株和受体对照在温室中栽培,待植株生长至四叶一心时,用不同渗透势的PEG-6000水溶液进行渗透胁迫处理,分析探讨转基因植株的抗旱效果及其抗旱机理。结果显示:当渗透势为0和0.5 MPa处理时,转基因植株和对照无明显差异;当渗透势为0.8 MPa和1.1 MPa处理时转基因植株较对照抗旱性明显提高。当渗透势为1.1 MPa处理96 h时,对照植株F_v/F_m降至0.2左右,而转基因植株仍正常生长,F_v/F_m值约为0.51,而且初始荧光（F₀）值、净光合速率（P_n）、胞间CO₂浓度（C_i）、蒸腾速率（T_r）等一系列参数转基因植株都明显优于对照,表明DREB2B基因能够提高棉花对水分胁迫的耐受性。     

六个品种花椰菜花球的营养成分分析与评价

为评价花椰菜(Brassica oleracea var. botrytis)的营养品质,测定了6个品种花球的10项营养指标,运用主成分分析和聚类分析方法对花椰菜品质进行综合评价。结果表明,6个品种的10项品质指标均存在不同程度的差异,变异幅度为12.22%~ 131.21%。维生素C (Vc)、总黄酮、总多酚、Fe、Ca、P、蛋白质含量间存在显著或极显著的关联性。系统聚类分析将6种花椰菜分为4类,黄色花椰菜‘209’、‘100’和‘217’各为1类,白色花椰菜‘210’、‘214’和‘218’聚为1类。主成分分析提取了花椰菜品质综合评价的3个主成分,获得6个营养评价指标：Vc、总黄酮、总多酚、Fe、Ca和P。通过建立评价函数模型: F= 0.5591Z₁+0.2189Z₂+0.1669Z₃,筛选出‘209’花椰菜的营养品质最高。这为挖掘及选育优良花椰菜品种提供了科学依据。     

不同CO2浓度升高和氮肥水平对水稻叶绿素荧光特性的影响

为研究不同CO₂浓度升高和氮肥水平对水稻叶绿素荧光特性的影响,利用由开顶式气室（OTC）组成的CO₂浓度自动调控平台开展田间试验。以粳稻9108为试验材料,CO₂浓度设置CK（对照,环境大气CO₂浓度）、C₁（CO₂浓度比CK增加160 μmol/mol）和C₂（CO₂浓度比CK增加200 μmol/mol）3个水平;氮肥设置低氮（N₁：10 g/m²）、中氮（N₂：20 g/m²）和高氮（N₃：30 g/m²）3个水平。结果表明,在低氮条件下,与CK相比,C₁处理使拔节期的F_o上升4.8%（P=0.031）;C₂处理使拔节期的F_o上升6.3%（P=0.015）,F_v/F_m下降4.8%（P=0.003）,使孕穗期的F_o上升12.7%（P=0.039）,F_v/F_o下降18.2%（P=0.039）。在高氮条件下,与CK相比,C₂处理使灌浆期的F_m、F_v和F_v/F_m分别下降3.6%（P=0.039）、4.9%（P=0.013）和1.3%（P=0.039）。在中氮条件下,与CK相比,C₁和C₂处理的影响不明显。在整个生育期内,CO₂浓度升高与施氮处理交互作用对水稻叶绿素荧光特性的影响未到达显著水平。研究表明,大气CO₂浓度升高使水稻叶片光系统Ⅱ受损,抑制其电子传递能力、电子受体Q_A氧化还原情况、最大光化学效率和潜在活性,通过适量施氮可以有效地缓解其负面效应。     

基于叶绿体基因组数据的芸香科属间系统发育初步分析（专题约稿）

该研究在人工控制水分条件下,设置3个干旱胁迫处理,选用3个主栽油菜品种‘陇油10号’、‘陇油2号’、‘青杂5号’幼苗进行盆栽试验,测定干旱胁迫条件下叶片相对含水量、叶绿素含量、光合气体交换参数及叶绿素荧光参数等指标,考察各指标在干旱胁迫过程中的变化特征,并通过主成分分析(PCA)和隶属函数法评价品种的抗旱性及其主要响应因子,以揭示西北地区油菜幼苗响应干旱胁迫的光合调控机制。结果表明：(1)各品种油菜幼苗的叶片相对含水量(RWC)均随干旱胁迫程度的递增而逐渐降低,最大水分亏缺(WSD)却逐渐上升。(2)各品种油菜幼苗叶片的叶绿素a含量、叶绿素总含量随着干旱胁迫程度的递增而先增加后递减,且同一种幼苗在不同处理间差异显著。(3)各品种油菜幼苗叶片的净光合速率(P_n)、水分利用效率(WUE)、单株生物量、气孔导度(G_s)、胞间CO₂浓度(C_i)均在受到干旱胁迫时迅速降低,且同一品种幼苗在不同处理间差异显著,而其叶片蒸腾速率(T_r)在干旱胁迫下无显著变化。(4)各品种油菜幼苗叶片光化学猝灭系数(qP)和非光化学猝灭系数(NPQ)随着干旱胁迫程度的递增先增加后递减,最大光化学效率(F_v/F_m)和电子传递速率(ETR)在受到干旱胁迫时迅速降低,且同一品种幼苗在不同处理间差异显著。(5)主成分分析结果表明,在油菜幼苗受到干旱胁迫时RWC、C_i、G_s、P_n、WUE、叶绿素总含量、叶绿素a含量和NPQ起主要调控作用;隶属函数法综合评价表明,3个品种油菜幼苗耐旱能力由高到低依次为‘陇油10号’＞‘陇油2号’＞‘青杂5号’。     

遮阴和施氮对黄檗幼苗叶片光合特性和碳氮计量特征的影响

选取大田环境下3年生黄檗幼苗,采用人工控制双因素随机区组试验,在不同光照［全光照(S₀)、轻度遮光21.4%(S₁)和重度遮光8.7%(S₂)］和不同氮添加［无添加对照(F₀)、轻度添加(F₁)和重度添加(F₂)］条件下,测定黄檗幼苗叶片的相对叶绿素含量(SPAD值)、气体交换参数及碳氮化学计量特征,探讨黄檗幼苗对遮阴和施氮的响应机制。结果表明：(1)随着遮光程度增强,黄檗幼苗叶片的SPAD值、蒸腾速率(T_r)、气孔导度(G_s)、碳氮比(C∶N)和瞬时光合氮利用率(PNUE)均呈现先增后降的趋势,两种遮光条件下SPAD均显著高于全光照环境;黄檗幼苗叶片的净光合速率(P_n)、水分利用率(WUE)和气孔限制值(L_s)逐渐降低;而叶片氮(N)和碳(C)含量均呈先降后升的趋势。(2)随氮添加量增加,黄檗幼苗叶片的P_n、WUE、L_s、N和C含量均呈先增后降趋势,T_r、G_s和PNUE则逐渐下降,而C∶N逐渐增加。(3)黄檗幼苗叶片的P_n在各光氮组合处理间均无显著差异;SPAD含量以S₁F₀、S₂F₀和S₁F₂处理组合显著较高,而以全光照(S₀)处理组合显著最低;T_r和G_s以轻度遮光(S₁)处理组合明显较高,而以S₂F₁、S₀F₂、S₂F₂明显较低;WUE和L_s均以S₀F₂显著最高,S₂F₂处理组合显著最低。黄檗幼苗叶片N和C含量在重度遮光/轻度氮添加(S₂F₁)时具有较大值,而其C∶N和PNUE在轻度遮光/无氮添加(S₁F₀)时具有较大值。(4)隶属函数综合评价认为,黄檗幼苗对光氮复合作用总体属中等耐受型,轻度遮光时不添加氮肥(S₁F₀)和轻度氮添加(S₁F₁)及全光照时轻度氮添加(S₀F₁)为适于幼苗生长的光氮组合。研究发现,光环境是影响黄檗幼苗光合作用和更新的主导因子,但黄檗苗期能耐受一定的遮阴胁迫;光照不受限制时,适当增加氮肥有利于黄檗幼苗生长;光照受限(重度遮光)时,施氮则抑制叶片叶绿素合成,降低了幼苗光能利用率,不利于其生长。     

A Unique Protease Cleavage Site Predicted in the Spike Protein of the Novel Pneumonia Coronavirus (2019-nCoV) Potentially Related to Viral Transmissibility

正Dear Editor,In December 2019, a novel human coronavirus caused an epidemic of severe pneumonia(Coronavirus Disease 2019,COVID-19) in Wuhan, Hubei, China(Wu et al. 2020; Zhu et al. 2020). So far, this virus has spread to all areas of China and even to other countries. The epidemic has caused 67,102 confirmed infections with 1526 fatal cases     

Curcuminoids as inhibitors of thioredoxin reductase: A receptor based pharmacophore study with distance mapping of the active site

Curcumin is the yellow pigment of turmeric that interacts irreversibly forming an adduct with thioredoxin reductase (TrxR), an enzyme responsible for redox control of cell and defence against oxidative stress. Docking at both the active sites of TrxR was performed to compare the potency of three naturally occurring curcuminoids, namely curcumin, demethoxy curcumin and bis-demethoxy curcumin. Results show that active sites of TrxR occur at the junction of E and F chains. Volume and area of both cavities is predicted. It has been concluded by distance mapping of the most active conformations that Se atom of catalytic residue SeCYS498, is at a distance of 3.56 from C13 of demethoxy curcumin at the E chain active site, whereas C13 carbon atom forms adduct with Se atom of SeCys 498. We report that at least one methoxy group in curcuminoids is necessary for interation with catalytic residues of thioredoxin. Pharmacophore of both active sites of the TrxR receptor for curcumin and demethoxy curcumin molecules has been drawn and proposed for design and synthesis of most probable potent antiproliferative synthetic drugs.     

Comparative morphology of the carpel in the Liliaceae: Hewardieae, Petrosavieae, and Tricyrteae

The young pistils in the melanthioid tribes, Hewardieae, Petrosavieae and Tricyrteae, are uniformly tricarpellate and syncarpous. They lack raphide idioblasts. All are multiovulate, with bitegmic ovules. The Petrosavieae are marked by the presence of septal glands and incomplete syncarpy. Tepals and stamens adhere to the ovary in the Hewardieae and the Petrosavieae but not in the Tricyrteae. Two vascular bundles occur in the stamens of the Hewartlieae and Tricyrtis latifolia. Ventral bundles in the upper part of the ovary of the Hewardieae are continuous with compound septal bundles and placental bundles in the lower part. Putative ventral bundles occur in the alternate position in the Tricyrteae and putative placental bundles in the opposite. position in the Petrosavieae. The dichtomously branched stigma in each carpel of the Tricyrteae is supplied by a bifurcated dorsal bundle.     

Enterovirus 71 3C proteolytically processes the histone H3 N-terminal tail during infection

Highlights
1. The N-terminal tail of histone H3 is specifically cleaved during EV71 infection.
2. Viral protease 3C is identified as a protease responsible for proteolytically processing the N-terminal H3 tail.
3. Our finding reveals a new epigenetic regulatory mechanism for Enterovirus 71 in virus-host interactions.     

Detection of EBV and HHV6 in the Brain Tissue of Patients with Rasmussen’s Encephalitis

Rasmussen’s encephalitis (RE) is a rare pediatric neurological disorder, and the exact etiology is not clear. Viral infection may be involved in the pathogenesis of RE, but conflicting results have reported. In this study, we evaluated the expression of both Epstein-Barr virus (EBV) and human herpes virus (HHV) 6 antigens in brain sections from 30 patients with RE and 16 control individuals by immunohistochemistry. In the RE group, EBV and HHV6 antigens were detected in 56.7% (17/30) and 50% (15/30) of individuals, respectively. In contrast, no detectable EBV and HHV6 antigen expression was found in brain tissues of the control group. The co-expression of EBV and HHV6 was detected in 20.0% (6/30) of individuals. In particular, a 4-year-old boy had a typical clinical course, including a medical history of viral encephalitis, intractable epilepsy, and hemispheric atrophy. The co-expression of EBV and HHV6 was detected in neurons and astrocytes in the brain tissue, accompanied by a high frequency of CD8⁺ T cells. Our results suggest that EBV and HHV6 infection and the activation of CD8⁺ T cells are involved in the pathogenesis of RE.     

Perinatal Vertical Transmission of Chikungunya Virus in Ruili,a Town on the Border between China and Myanmar

正Dear Editor,Chikungunya virus (CHIKV), an arbovirus in the family of Togaviridae, genus Alphavirus, is transmitted by the A.aegyptii or A. albopictus mosquito, and causes disease in humans characterized by fever, rash, and arthralgia (Silva and Dermody 2017; Suhrbier 2019). It was first reported in 1953 in Tanzania, and caused only a few outbreaks and sporadic cases in Africa and Asia in last century. However, in the epidemic in 2004, CHIKV acquired mutations that conferred enhanced transmission by the A. albopictus mosquito(Schuffenecker et al. 2006). Since then, it has successively caused outbreaks in Africa, the Indian Ocean, South East Asia, the South America, and Europe (Zeller et al. 2016).     

Development of a Novel Reverse Transcription Loop-Mediated Isothermal Amplification Method for Rapid Detection of SARS-CoV-2

In conclusion, the novel visual RT-LAMP assay is a simple, rapid, and sensitive approach for detection of SARS-CoV-2, and it is ready for application in primary care and community hospitals or health care centers, and even patients' own houses in response to the current SARS-CoV-2 epidemic because the assay does not require sophisticated equipment and skilled personnel. Furthermore, it is also ready to be used in fields for screening samples from wild animals and environments to facilitate the identification of potential intermediate hosts that mediate the cross-species transmission of SARS-CoV-2 from bats to humans.