荧光发光测定AGPase活力方法初步建立及应用

腺苷二磷酸葡萄糖焦磷酸化酶(AGPase)活力传统上采用32P同位素标记反应底物来测定,但因测定条件的限制而极大地影响了其应用.该研究依据荧光素酶催化荧光素生成发光氧化荧光素的原理,在优化基本反应体系、确立反应体系ATP浓度和荧光强度线性关系等基础上,初步建立了以荧光发光反应测定AGPase活力的新方法,并运用新方法测定了含有不同glgC基因拷贝数菌株的AGPase活力.测定结果显示,不同菌株AGPase活力随glgC拷贝数不同存在显著差异,且其变化趋势与理论预期一致,即新方法可用于AGPase活力的体外测定,且具有更加安全、灵敏、简便和成本低的特点.     

血清锰和铜锌超氧化物歧化酶活力测定

超氧化物歧化酶(SOD)是催化超氧自由基歧化反应的一类金属酶。人体内存在Mn-SOD和Cu,Zn-SOD。目前测定SOD活力方法有化学比色法和化学发光法等。化学发光法测定Cu,Zn-SOD灵敏度最高,但应用于Mn-SOD活力测定,灵敏度很低,且需昂贵试剂和仪器。比色法灵敏度低,尚不能准确测定血清SOD活力。我们采用核黄素光照产生的超氧自由基与羟胺反应,建立了测定SOD活力新方法。该法灵敏度高,重复性好,能检测血清Mn-SOD和Cu,Zn-SOD活力,现将方法报告如下。     

测定T_4-RNA连接酶活力的新方法及tRNA单加反应条件的研究

本文对T_4-RNA连接酶催化tRNA单加pCp的反应条件进行了探讨。tRNA单加pCp的反应在37℃进行1小时,产率一般可达80%以上,条件适当时可达定量产率。利用这个反应建立了一个T_4-RNA连接酶活力测定的新方法。单加活力单位定义为,在标准条件下,37℃,60分钟,催化tRNA单加pCp产生1 pmole产物的酶量为1单加活力单位。1单加活力单位约相当于0.58焦磷酸交换单位。用该方法进行T_4-RNA连接酶制备过程的活力测定表明,该方法适合于纯酶制剂的活力测定也适合于粗酶制剂的活力测定。     

测定T_4-RNA连接酶活力的新方法及tRNA单加反应条件的研究

本文对T_4-RNA连接酶催化tRNA单加pCp的反应条件进行了探讨。tRNA单加pCp的反应在37℃进行1小时,产率一般可达80%以上,条件适当时可达定量产率。利用这个反应建立了一个T_4-RNA 连接酶活力测定的新方法。单加活力单位定义为,在标准条件下,37℃,60分钟,催化tRNA 单加pCp 产生lpmole 产物的酶量为1单加活力单位。1单加活力单位约相当于0.58焦磷酸交换单位。用该方法进行T_4-RNA 连接酶制备过程的活力测定表明,该方法适合于纯酶制剂的活力测定也适合于粗酶制剂的活力测定。     

不同植物的碳酸酐酶活力差异研究

碳酸酐酶是催化二氧化碳的可逆水合反应的一种含锌金属酶。测定不同植物、同一植物不同部位、同一植物同一部位不同时间的碳酸酐酶的活力,研究诸葛菜和油菜碳酸酐酶及其胞外酶活力的差异,初步探讨碳酸酐酶活力与植物抗干旱能力之间的关系。研究结果为诸葛菜的喀斯特适生性的研究提供依据。     

一种新的末端转移酶活力测定法——荧光底物掺入法

本文介绍了一种末端脱氧核苷酰转移酶(TdT)活力的荧光底物掺入测定法。本法基于合成一种荧光物质εdATP(1,N-ethenodeoxyadenosine triphosphate)以代替放射性标记底物,在含εdATP与oligo(dA)₂₅的反应体系中,使TdT催化εdATP加接至oligo(dA)₂₅的3′-OH末端可得聚合产物,经分离、酶解后,测定游离εdATP的荧光强度并根据εdATP的掺入量测定TdT活力。方法简便、灵敏,测定范围较宽、重现性好及无需放射性底物。适用于临床定量检测白血病患者白细胞中TdT酶活力及基因工程中TdT工具酶活力的测定。     

α-酮戊二酸依赖型双加氧酶催化特性及反应耦联辅因子对其催化羟基化反应的影响

【目的】以重组大肠杆菌表达的枯草芽孢杆菌(Bacillus subtilis)L-异亮氨酸双加氧酶(L-isoleucine dioxygenase,IDO)为研究对象,考察其催化L-异亮氨酸(L-Ile)羟基化反应的影响因素,构建IDO催化合成羟基氨基酸的反应体系。【方法】通过Ni-NTA亲和层析法从重组大肠杆菌(Escherichia coli)BL21/p ET28a-ido中纯化获得重组IDO,以L-Ile为底物,考察重组IDO催化羟基化反应的影响因素,并进一步针对耦联反应优化α-酮戊二酸(α-KG)在重组IDO酶促转化体系中的添加浓度。【结果】基于重组IDO催化L-Ile羟基化的活性测定,计算该酶Km为0.247 mmol/L,kcat为1.260 s-1,kcat/Km为5.101 L/(mmol·s),与其他同源酶动力学参数比较分析表明,重组IDO的底物亲和性及催化效率较高。重组IDO催化反应的最适温度为20°C、最适p H为7.0;在35°C以下较为稳定;反应体系中Fe2+最适浓度为1 mmol/L。重组IDO可催化不同L-氨基酸反应,对L-异亮氨酸、L-正亮氨酸、L-甲硫氨酸的活性较高。通过优化α-KG浓度,反应体系中添加30 mmol/Lα-KG时,可将底物浓度提高至70 mmol/L,产物4-羟基异亮氨酸(4-HIL)的摩尔产率达66.20%,表明α-KG作为反应耦联辅因子,其浓度对重组IDO催化L-Ile羟基化具有显著影响。【结论】重组IDO的底物亲和性、催化效率、最适催化条件、稳定性等基本性质有利于催化L-Ile羟基化反应。在其催化反应体系中,α-KG作为反应耦联辅因子,对酶促转化效果影响显著。研究结果为4-HIL及其他羟基氨基酸的酶促转化提供了研究基础。     

固氮酶底物络合活化模式的量子化学计算

用改进的EHMO方法对分子氮和乙炔作为固氮酶底物时的络合活化模式进行了总能量及电荷分布的量化近似计算.结果表明固氮酶底物活性中心(FeMo-co)对于分子氮和其它底物在络合活化时是区别对待的.     

Fd的制备及其参与的HPLC—荧光法检测PaO活力研究

PaO体外活力测定需要Fd作还原剂。通过丙酮沉淀法、DEAE柱层析等制备菠菜Fd,并将其应用于HPLC—荧光法研究PaO催化的Pheide α降解反应。结果表明：经DEAE柱层析纯化得到的是氧化型Fd,而未经DEAE柱层析得到的是还原型Fd,还原型Fd可以参与Pheide α降解反应,色谱峰面积可以表示PaO的活力;FCC的HPLC洗脱时间是5．1min,遮光条件下FCC的半衰期是34．66min,PaO在20℃催化Pheide α降解的活力较高。小麦幼苗离体暗诱导衰老过程中PaO活力变化幅度较大,暗处理5d其活力增加24．47倍,“PaO”Chl降解途径在麦类作物叶片衰老过程中普遍存在。     

非水相体系酶催化反应研究进展

非水相酶催化反应是酶催化反应中的一个重要方面。非水相溶剂通常可增加底物溶解度,减少水相中的副反应,加快生物催化的速率和效率,在药物及药物中间体和食品等方面具有较大的应用价值。以下探讨了非水相体系对酶活力及酶促反应速率的影响因素,并阐述酶的化学修饰、固定化及定点突变对酶活力的影响,进一步分析无溶剂系统、反胶束、超临界流体及离子液体的不同溶剂体系对酶反应速率及催化效率的影响。此外,还列举一些非水相酶催化反应的应用实例。     

Requirement of NifX and other nif proteins for in vitro biosynthesis of the iron-molybdenum cofactor of nitrogenase

The iron-molybdenum cofactor (FeMo-co) of nitrogenase contains molybdenum, iron, sulfur, and homocitrate in a ratio of 1:7:9:1. In vitro synthesis of FeMo-co has been established, and the reaction requires an ATP-regenerating system, dithionite, molybdate, homocitrate, and at least NifB-co (the metabolic product of NifB), NifNE, and dinitrogenase reductase (NifH). The typical in vitro FeMo-co synthesis reaction involves mixing extracts from two different mutant strains of Azotobacter vinelandii defective in the biosynthesis of cofactor or an extract of a mutant strain complemented with the purified missing component. Surprisingly, the in vitro synthesis of FeMo-co with only purified components failed to generate significant FeMo-co, suggesting the requirement for one or more other components. Complementation of these assays with extracts of various mutant strains demonstrated that NifX has a role in synthesis of FeMo-co. In vitro synthesis of FeMo-co with purified components is stimulated approximately threefold by purified NifX. Complementation of these assays with extracts of A. vinelandii DJ42. 48 (DeltanifENX DeltavnfE) results in a 12- to 15-fold stimulation of in vitro FeMo-co synthesis activity. These data also demonstrate that apart from the NifX some other component(s) is required for the cofactor synthesis. The in vitro synthesis of FeMo-co with purified components has allowed the detection, purification, and identification of an additional component(s) required for the synthesis of cofactor.     

器壁固定化脂肪酶Pseudomonas cepacia lipase的非水活性与稳定性

许多脂肪酶在有机体系中表现出催化作用,可用于绿色有机合成. 但其催化活性和稳定性明显低于水/油（有机相）界面上的表现. 为了提高脂肪酶在有机反应体系中的活性和稳定性,依据脂肪酶的界面活化机制,以水为酶蛋白构象优化剂、羧甲基纤维素为赋形剂,通过物理吸附的方式,将典型的假单胞菌脂肪酶（Pseudomonas cepacia lipase）固定在锥形瓶的内壁上,形成简易的生物反应器. 为方便检测器壁固定化酶促反应动力学,选择特征吸收为640 nm的生化指示剂2,6-二氯靛酚为反应底物,乙酸乙烯酯为酰化试剂,丙酮为溶剂. 光谱检测表明,催化反应0.5 h后,器壁固定化脂肪酶转化底物的能力是脂肪酶粉的6倍. 在每次催化5 h共10次的循环催化中,器壁固定化脂肪酶的催化活性平均每次仅降低3.2%,而酶粉降低11.8%. 结果表明,该器壁固定化脂肪酶的活性和稳定性相对于酶粉明显提高,这将为通过固定化有效提高脂肪酶的非水催化作用提供重要的参考.     

脂肪酶活性部位上的盖与界面活性

脂肪酶是一种非常重要的水解酶,在工业催化、医药和科学研究等领域中有广泛应用. 大部分脂肪酶的活性部位上方有一段被称为“盖”的α-螺旋,这种盖赋予脂肪酶在水/油界面上有特殊的催化活性,界面活性.而在单一水相或油相中却表现出低活性或无活性.界面活性与盖的组成、大小、构象及其存在环境等密切相关,探明盖与脂肪酶界面活性的关系对于脂肪酶的开发和利用是非常关键的.因此,长期以来人们对盖在脂肪酶催化作用中所扮演的角色进行了孜孜不倦的探索.本文从盖的构象、移动、组成和删除等方面综述了其对脂肪酶催化作用的影响,期望对人们认识脂肪酶盖与其催化作用之间的关系有一定的帮助.     

酪氨酸酶在有机介质中的酶活性

研究了蘑菇酪氨酸酶在有机溶剂中催化邻苯二酚向邻苯醌的转化反应,结果表明酪氨酸酶在有机介质中能保持较高的活性,其活性主要受体系中的水活度控制.在适当控制酶分子上结合水的条件下,酶活性随温度升高而增大.无机盐的水合物可用于控制这种低水有机介质中的水活度.     

Purification and characterization of NafY (apodinitrogenase gamma subunit) from Azotobacter vinelandii

The formation of an active dinitrogenase requires the synthesis and the insertion of the iron-molybdenum cofactor (FeMo-co) into a presynthesized apodinitrogenase. In Azotobacter vinelandii, NafY (also known as gamma protein) has been proposed to be a FeMo-co insertase because of its ability to bind FeMo-co and apodinitrogenase. Here we report the purification and biochemical characterization of NafY and reach the following conclusions. First, NafY is a 26-kDa monomeric protein that binds one molecule of FeMo-co with very high affinity (K(d) approximately equal to 60 nm); second, the NafY-FeMo-co complex exhibits a S = 3/2 EPR signal with features similar to the signals for extracted FeMo-co and the M center of dinitrogenase; third, site-directed mutagenesis of nafY indicates that the His(121) residue of NafY is involved in cofactor binding; and fourth, NafY binding to apodinitrogenase or to FeMo-co does not require the presence of any additional protein. In addition, we have obtained evidence that suggests the ability of NafY to bind NifB-co, an FeS cluster of unknown structure that is a biosynthetic precursor to FeMo-co.     

Biosynthesis of the iron-molybdenum cofactor of nitrogenase

The iron-molybdenum cofactor (FeMo-co) of nitrogenase is a Mo-Fe-S cluster that has been proposed as the site of substrate reduction for the nitrogenase enzyme complex. Biosynthesis of FeMo-co in Klebsiella pneumoniae requires at least six nif (nitrogen fixation) gene products. One of the nif genes, nifV, apparently encodes a homocitrate synthase. The synthesis and accumulation of homocitrate [(R)-2-hydroxy-1,2,4-butanetricarboxylic acid] in K.pneumoniae is correlated to the presence of a functional nifV gene. K.pneumoniae strains with mutations in nifV synthesize and accumulate an aberrant form of FeMo-co. Nitrogenase from NifV- mutants is capable of reducing some of the substrates of nitrogenase effectively (e.g. acetylene), but reduces N2 poorly. With the aid of an in vitro FeMo-co synthesis system, it recently has been established that homocitrate is an endogenous component of FeMo-co. Substitution of homocitrate with other carboxylic acids results in the formation of aberrant forms of FeMo-co with altered substrate reduction capability.     

高负载Cu单原子纳米酶的制备和类酶活性研究

目的 单原子纳米酶（single-atom nanozyme，SAN）因其高原子利用率及丰富的类酶活性被广泛研究。但是目前大多数SAN活性位点负载量较低，限制了其进一步应用和发展。本研究旨在制备一种高原子负载量的SAN，并对其类酶活性进行系统研究，希望为高负载SAN的制备提供思路，并为SAN在更广泛领域的应用提供理论支持。方法 本研究通过原位锚定策略将金属盐前驱体锚定在氨基化石墨烯量子点框架中，在惰性气体保护下进行高温热解稳定Cu原子和载体之间的化学键，制备出负载量高达7.66%（质量百分比）的高负载Cu单原子纳米酶（high-loading Cu SAN）。此外，以3,3",5,5"-四甲基联苯胺（TMB）和氮蓝四唑（NBT）为显色剂，评估了high-loading Cu SAN的类过氧化物酶（POD）、类氧化物酶（OXD）及类超氧化物歧化酶（SOD）活性，并与传统金属有机框架锚定法制备的低负载Cu单原子纳米酶（low-loading Cu SAN）作比较。以过氧化氢（H₂O₂）为催化底物，对比研究了高/低负载Cu SAN的类过氧化氢酶（CAT）活性。结果 研究表明，本文制备的高负载Cu SAN的类POD和SOD活性分别是低负载Cu SAN的3.4倍和8.88倍，且表现出类酶催化选择性。结论 本研究为高负载SAN的制备和活性研究提供了思路，为SAN在检测传感、疾病治疗以及环境保护等方面的应用奠定了基础。     

Purification of a NifEN protein complex that contains bound molybdenum and a FeMo-Co precursor from an Azotobacter vinelandii DeltanifHDK strain

The NifEN protein complex serves as a molecular scaffold where some of the steps for the assembly of the iron-molybdenum cofactor (FeMo-co) of nitrogenase take place. A His-tagged version of the NifEN complex has been previously purified and shown to carry two identical [4Fe-4S] clusters of unknown function and a [Fe-S]-containing FeMo-co precursor. We have improved the purification of the his-NifEN protein from a DeltanifHDK strain of Azotobacter vinelandii and have found that the amounts of iron and molybdenum within NifEN were significantly higher than those reported previously. In an in vitro FeMo-co synthesis system with purified components, the NifEN protein served as a source of both molybdenum and a [Fe-S]-containing FeMo-co precursor, showing significant FeMo-co synthesis activity in the absence of externally added molybdate. Thus, the NifEN scaffold protein, purified from DeltanifHDK background, contained the Nif-Bco-derived Fe-S cluster and molybdenum, although these FeMo-co constituents were present at different levels within the protein complex.     

Dynamic interactions between enzyme activity and the microstructured environment

A new approach for the study of an enzyme's relationship with its own reaction medium has been developed. One technique of micellar enzymology is the use of pseudohomogeneous systems composed of surfactant/water/organic solvent. In such systems, the physicochemical properties and textures of the medium depend on the relative ratios of the different components. Enzymes are catalytically active in such systems and up to the present have been studied in different microenvironments, such as micelles, microemulsions and lyotropic liquid crystals. Our purpose was to develop a system in which the enzyme could, by its activity, modify one of the components in such a way that the relative ratios among them changed sufficiently to produce a transition from one phase domain to another. The three components, water (or glucose in water), octanol and octyl-beta-D-glucoside, form a classical ternary water/oil/surfactant system. The relevant phase diagram shows different macroheterogeneous phases and microstructured domains. The enzyme beta-D-glucosidase hydrolyses octyl-beta-D-glucoside to form glucose and octanol. The enzyme was found to change the relative ratios of water (or glucose in water), octanol and octyl-beta-D-glucoside in such a manner that the physicochemical structure of the medium was modified. At the beginning of the reaction beta-D-glucosidase was present in a micellar solution of octyl-beta-D-glucoside in water. As the enzymatic reaction proceeded, the medium became biphasic. One of the two phases was the micellar solution of octyl beta-D-glucoside in water, while the other phase was either a microemulsion or a liquid crystalline phase. In addition the enzyme, through its catalytic activity, was able to modify the physiocochemical properties of the reaction medium.     

Effects of water on equilibria catalysed by hydrolytic enzymes in biphasic reaction systems

In the literature on hydrolase-catalysed synthetic reactions in aqueous-organic biphasic systems, it has been stated that low water concentrations contribute to favourable shifts in equilibrium. It is argued here that this is not a sufficient condition for mass action effects of water. A simple method of treating such equilibria is suggested, using the thermodynamic activity of water. Only when its activity is significantly reduced below 1 can water contribute to a shift of equilibrium in favour of synthetic products. Such a reduction is not necessarily obtained by creating a biphasic system, however low the water content, but requires that the aqueous phase becomes a very concentrated solution/dispersion of hydrophilic species.