罗布麻及其易混品的DNA分子鉴定

为从分子水平更准确地鉴别罗布麻及其易混品,本研究利用PCR产物直接测序法对罗布麻、大叶白麻和Apoacynum cannabinum的核基因组（rDNA）ITS区与叶绿体基因组（cpDNA）trnL内含子及trnL-F间隔区序列进行测序与比较。结果显示,罗布麻和大叶白麻ITS序列完全一致,与A. cannabinum在ITS1区有13个位点、在ITS2区有10个位点不同;在trnL内含子区及trnL-F间隔区,罗布麻和大叶白麻共有3个位点不同,罗布麻和A. cannabinum间共有23个位点、大叶白麻和A. cannabinum间共有20个位点不同。研究表明,依据rDNA ITS区序列可鉴别A. cannabinum和国产“罗布麻”（罗布麻与大叶白麻）;利用cpDNA trnL内含子及trnL-F间隔区序列可鉴别罗布麻及其相似种。     

拟纤枝真藓(Bryum petelotii)的地理新分布与分类地位探讨

报道了中国大陆新记录种——拟纤枝真藓(Bryum petelotii Thér.et Henr.)在贵州、云南的分布;描述了本种的形态特征和地理分布,并讨论了本种与相近种真藓(Bryum argenteum Hedw.)和纤枝短月藓［Brachymenium exile(Doz.et Molk.) Bosch et Lac.］的关系;基于文献和相关标本的研究,阐述并讨论了Ochi H.和B.C.Tan等关于该种分类地位的观点,并赞同将拟纤枝真藓置于真藓属(Bryum Hedw.)的观点。     

丝瓜藓属(Pohlia Hedw.)的系统位置及属内种间关系探讨

丝瓜藓属的系统地位及属内种间关系存在争议。本研究首次利用核糖体DNA内转录间区(ITS)序列数据对丝瓜藓属及相关科属植物进行系统发育分析。最大简约法,最大似然法及贝叶斯推论法构建的系统树均表明,ITS序列数据不支持将丝瓜藓属划归提灯藓科。丝瓜藓属植物与缺齿藓属植物构成一个单系分支。Brotherus(1903),Ochi(1959),Shaw(1984)及Hill等(2006)等学者提出的丝瓜藓属属下分类均不是单系类群。     

山麦冬及其近缘种DNA条形码研究

通过分析山麦冬及其近缘种cpDNA trnL-F、psbA-trnH间隔区序列特点,探讨trnL-F、psbA-trnH序列作为山麦冬及其近缘种DNA条形码的潜力。分别对两者进行PCR扩增后,并进行纯化测序。其中山麦冬及其近缘种9个物种18个样品的trnL-F序列长度为355~356 bp,在山麦冬属内序列完全一致,但在沿阶草属中存在特异变异位点,可对麦冬与沿阶草两物种进行鉴别。而psbA-trnH序列长度为543~544 bp,仅在麦冬中存在特异鉴别位点。结果表明,trnL-F、psbA-trnH序列由于进化速率低、保守性强,仅适合麦冬类植物属间鉴别的DNA条形码,而在属下水平的应用有一定的局限。     

河南省苔藓植物新记录——残齿藓属（Forsstroemia Lindberg）

简要回顾了残齿藓属（Forsstroemia）所属系统位置的三个主要观点,本文更赞同隶属于薄齿藓科（Leptodontaceae）的观点。首次记录了残齿藓属及硬叶残齿藓（Forsstroemia producta）在河南省的分布,在科级分类等级上也是新记录。详细描述了本种的形态特征,对形态特征与之相近的几个属和种进行了比较。     

真藓属（Bryum Hedw.）蒴齿形态特征及其分类学意义

通过光学显微镜和扫描电子显微镜观察了中国产真藓属（Bryum Hedw.）12种植物蒴齿的形态特征。结果显示,根据真藓属齿片的曲向可以分为近直立、齿片伸入齿条间和齿片向外反曲等3种类型。根据齿毛的有无,也可分为3个类群。同时利用STATISTICA 6.0统计软件对12种真藓属植物进行聚类分析及主成分分析。研究结果显示,齿片的曲向类型、齿毛是否发育等形态特征可作为真藓属植物种间的分类依据,为藓类植物蒴齿形态特征与分类和系统进化关系的研究提供了新的资料。     

云南真藓和细叶真藓的核糖体DNA ITS序列分析

从形态特征和地理分布特征比较分析云南真藓和细叶真藓的区别,通过对核糖体DNA的内转录间隔区序列分析研究,对二者进行分子水平鉴定.对包括真藓属及相关属的6种植物的ITS序列进行扩增和测序,使用DNAMAN和MEGA3.0软件对获得的ITS序列数据进行分析.结果表明,云南真藓和细叶真藓的ITS-1和ITS-2区在序列长度,...     

新疆大帽藓属6种植物茎及叶的比较解剖学研究

运用石蜡切片和电镜技术,对新疆的6种大帽藓属（Encalypta Hedw.）植物的茎和叶进行解剖学观察。结果表明：高山大帽藓（E.alpina Smith.）疣多呈菱形或“柱状”密集着生在叶表面,疣上纹饰呈纵棱和小疙瘩状;裂瓣大帽藓（E.ciliata Hedw.）茎横切面为五角形, 中轴细胞角隅加厚,叶腹面的粗疣大部分集中分布在凹陷的表面细胞壁上;剑叶大帽藓（E.spathulata C.Mull.）茎横切面没出现中柱鞘,疣在基部分叉丛生,叶腹面的表皮细胞壁不凹陷;钝叶大帽藓（E.vulgaris Hedw.）没有叶尖,中肋导水细胞大,叶表面细胞壁较光滑且强烈凹陷,其壁上的乳突不明显;天山大帽藓（E.tianschanica j.c.Zhao,R.L.Hu et S.He）茎内外皮层区分明显,内皮层细胞质浓,叶背面的分叉状粗疣呈密集生长在叶腹面的星状粗疣大多集中分布在稍下陷的细胞壁上;西藏大帽藓（E.tibetana C.Mull）中肋细胞壁加厚,叶片具层层叠叠的、密集的、不规则分叉的粗疣,叶背面有些部位被带状附属物所覆盖。这6种植物叶的背、腹面均具不同程度的分叉粗疣,但粗疣的大小、着生位置、呈现的状态、疣上不同的纹饰却各不相同;中肋细胞的层数、及导水主细胞的大小、状态也大不相同,这些细微特征的观察研究可作为大帽藓属植物分类学的依据之一。     

中国青藓科植物分类学修订（一）：异叶藓属

在对世界异叶藓属（Kindbergia Ochyra）植物进行系统研究基础上,作者对中国分布的该属植物进行了分类学修订。结果表明：（1）中国分布的“树状异叶藓”［K.arbuscula(Broth.)Ochyra］、“异叶藓”［K.praelonga(Hedw.)Ochyra］和密枝燕尾藓［Bryhnia serricuspis(Müll Hal.)Y.F.Wang & R.L.Hu］为K.dumosa(Mitt.)Ignatov & Huttunen的错误鉴定;（2）因树状分枝的植物体、异形的茎枝叶、近及顶的强壮中肋和明显下延的叶基等特征不同于青藓科现存任一类群,故将中国分布的“异叶藓属”植物移入新建属——拟异叶藓属（Pseudokindbergia M.Li,Y.F.Wang,Ignatov & B.C.Tan）中;（3）拟异叶藓属区别于异叶藓属的主要形态特征为：假鳞毛半圆形至三角状半圆形,先端钝或平截;孢蒴倾立至水平;蒴盖圆锥形。（4）到目前为止,中国尚未发现异叶藓属植物的分布。     

基于叶绿体trnL-F,rbcL序列和核核糖体ITS序列探讨蓼属（蓼科）头状蓼组的系统发育

选用叶绿体基因trnL-F,rbc-L序列和核核糖体ITS序列对蓼属头状蓼组的分类和系统发育进行了分析。以药用大黄为外类群,用最大简约法对3个片段的单独和联合矩阵分别构建系统发育树。结果表明,头状蓼组是一个较自然的类群,与春蓼组、刺蓼组和金线草属的亲缘关系较近;支持头状蓼组作为一组放在春蓼属,细茎蓼和蓝药蓼从头状蓼组转移至冰岛蓼属;不支持将刺蓼组并入头状蓼组;对于小叶蓼的系统学位置有待于进一步研究。     

A tribute to Dr Royce E. Longton

Abstract

The relationships within the Bryaceae, with emphasis on the genus Bryum, were studied based on morphological and anatomical characters and using cladistic methods. The analysis was performed with thirty-six species representing the different parts of the family, and with Funaria hygrometrica Hedw., Mnium hornum (Dicks.) Lindb., and Tayloria lingulata Hedw. as outgroups. The Bryaceae, and the subfamilies Bryoideae, Mielichhoferioideae, and Pohlioideae, as defined by several earlier authors appear to be paraphyletic. The genus Bryum seems to be paraphyletic, because Leptobryum pyriforme (Hedw.) Wils., Osculatia columbica De Not., and Rhodobryum giganteum (Schwaegr.) Paris, appear as ingroups within this genus when the tree is rooted with Funaria. Mnium hornum came out as the sister taxon of a clade including Pohlia cruda (Hedw.) Lindb. and P. longicollis (Hedw.) Lindb., whereas P. drummondii (Müll. Hall.) A.L. Andrews, appears not to be closely related to the other two Pohlia species studied here, making this genus paraphyletic. Mielichhoferia mielichhoferiana (Funck.) Loeske, appears as the sister taxon of Schizymenium bryoides Harv., suggesting that both these genera are paraphyletic. Overall, the stabilities of the clades are low and it is suggested that combined analyses of morphological, anatomical, and molecular data are needed to get better resolved and more stable trees.     

A proposed reclassification of Bryum,Anomobryum and Brachymenium (Musci,Bryaceae)

Abstract

The traditional generic classification in the Bryoideae (Bryaceae) is based primarily on details of the sporophyte, particularly peristome reduction and capsule inclination. Recent research, however, has suggested that closely related species in Anomobryum can have very distinct capsules, varying from complete peristomes and inclined capsules to reduced peristomes and erect capsules. The suggestion is made here that sporophyte features, especially those related to peristome features, may obscure phylogenetic relationships. A revised classification is proposed, based on analyses of 100 species of Bryum, Anomobryum, and Brachymenium and sixteen sporophytic and gametophytic characters. The revised classification groups species with similar gametophores but is supported by at least some sporophytic characters. Analysis of variance and principal components analysis indicate that both the traditional and revised classification provide effective summaries of the variation within the 100 species examined. The new classification consists of three informal groups of species which can be recognized at generic rank. One comprises Bryum species, including those with reduced peristomes and inclined capsules. A second comprises all species of Anomobryum, as well as species of Bryum and Brachymenium with similar gametophores. The third group consists of the rosulate species of Bryum and Brachymenium. Phylogenetically, the second group may be more closely related to Pohlia than to the species in the first and third groups. The third group appears to be most closely related to Rhodobryum and Plagiomnium. Suggested names are provided for groups one and three, while the name Bryum is retained for group two. No nomenclatural changes are made, however, until more research is done.     

东北地区部分大型藓类植物遗传多样性的RAPD研究

采用RAPD标记构建了东北地区20种大型藓类植物的系统关系。从200个随机引物中筛选出清晰且多态性高的7个引物,共产生了82条DNA片段,其中79条谱带具有遗传多态性,约占96.34%,平均每个引物扩增的DNA片段数为11.71条。采用NTSYS-pc数据分析软件,计算Nei氏相似性系数,建立了UPGMA聚类图。结果表明：以遗传相似性系数0.27为界限划分,可将20种苔藓植物分为二大类,即泥炭藓类和真藓类。以遗传相似性系数0.42为界限划分,可将20种苔藓植物划分为四大类群,即泥炭藓类、顶蒴单齿亚类、顶蒴双齿亚类和侧蒴双齿类。从整个聚类图可以看出,泥炭藓类是较原始的类群,而金发藓类是较进化的类群,这一结果和大多数苔藓植物经典分类系统相同。     

基于形态学特征和分子数据的中国缺齿藓科初步研究

为探讨缺齿藓类与真藓科、提灯藓科的系统关系,理清缺齿藓科的系统位置和中国缺齿藓科分类问题,该研究以中国分布的缺齿藓科植物和相关类群4 000余份标本为材料,进行详细的形态学研究,并选用其中35种、40份样品的4个DNA片段(rps4、trnG、trnL-trnF、atpB-rbcL)联合数据用于分子系统分析,采用邻接法(NJ)和最大似然法(ML)构建分子树。结果表明:(1)在分子树中,缺齿藓类与真藓科植物分别聚在具有高支持率的不同分支上,叶形、叶细胞等形态学特征也有较大差异,缺齿藓类应从广义的真藓科分出。(2)在分子树中,虽然缺齿藓类与提灯藓科植物聚在同一分支中,但无形态学的共源性状,二者不应视为一个单系类群。(3)缺齿藓科是一个自然类群,缺齿藓科内属间存在着密切的系统关系,缺齿藓科的主要识别特征为:植物体小型,茎常分枝;叶形和叶细胞为丝瓜藓型(Pohlia-like),披针形至长椭圆形,中上部细胞狭长,线状菱形或蠕虫形;生殖苞多生于新生枝顶;蒴齿为互生双齿层,常有不同程度的退化或一层蒴齿缺失,稀双层蒴齿缺失。(4)中国缺齿藓科包含有5属,即缺齿藓属(Mielichhoferia)、丝瓜藓属(Pohlia)、拟丝瓜藓属(Pseudopohlia)、合齿藓属(Synthetodontium)和小叶藓属(Epipterygium),目前为止共计34种(含种下分类单位)。     

Species, genomes, and section relationships in the genus Arachis (Fabaceae): a molecular phylogeny

The economically important genus Arachis (Fabaceae) comprises 80 species restricted to South America. One monograph on the genus divided it into nine sections and included an intuitive assessment of evolutionary relationships. There is no comprehensive phylogenetic study of the genus. To test the current systematic treatment of the genus, we reconstructed a phylogeny for Arachis using nuclear ITS and plastid trnT–trnF sequences from 46 species representing all nine sections. ITS cloning of the allotetraploid species of section Arachis indicated the presence of A and B genome alleles and chimeric sequences. Our study revealed that species from section Extranervosae were the first emerging lineage in the genus, followed by sections Triseminatae and Caulorrhizae, and two terminal major lineages, which we refer to as erectoides and arachis. The lineage erectoides comprises members of sections Erectoides, Heteranthae, Procumbentes, Rhizomatosae, and Trierectoides. Species in the arachis lineage form two major clades, arachis I (B and D genomes species and the aneuploids) and arachis II (A genome species). Our results substantiated the sectional treatment of Caulorrhizae, Extranervosae, and Triseminatae, but demonstrated that sections Erectoides, Procumbentes, and Trierectoides are not monophyletic. A detailed study of the genus Arachis with denser taxon sampling, additional genomic regions, plus information from morphology and cytogenetics is needed for comprehensive assessment of its systematics.     

黑龙江省蹄盖蕨科(Athyriaceae)植物的RAPD分析及其系统学意义

在形态分类研究的基础上,利用RAPD技术,对黑龙江省蹄盖蕨科植物6属9种共15个种群进行了遗传多样性分析,分析结果表明：（1）假冷蕨属应包括在蹄盖蕨属中（2）角蕨属与蹄盖蕨属,羽节蕨属与冷蕨属亲源关系较近（3）短肠蕨属为独立一属,与其它属亲源关系较远。根据黑龙江省蹄盖蕨科植物的DNA水平的研究结果,再结合其形态学特征,建议将黑龙江省蹄盖蕨科划分为3个亚科：冷蕨亚科(Cystopterioideae)包括2个属：冷蕨属(Cystopteris)和羽节蕨属(Gymnocarpium)。蹄盖蕨亚科(Athyrioideae)包括3个属：蹄盖蕨属(Athyrium)、假冷蕨属(Pseudocystopteris)和角蕨属(Cornopteris)。双盖蕨亚科(Diplazioideae)包括短肠蕨属(Allantodia)。     

DNA Barcode ITS Effectively Distinguishes the Medicinal Plant Boerhavia diffusa from Its Adulterants

Boerhavia diffusa (B. diffusa), also known as Punarnava, is an indigenous plant in India and an important component in traditional Indian medicine. The accurate identification and collection of this medicinal herb is vital to enhance the drug’s efficacy and biosafety. In this study, a DNA barcoding technique has been applied to identify and distinguish B. diffusa from its closely-related species. The phylogenetic analysis was carried out for the four species of Boerhavia using barcode candidates including nuclear ribosomal DNA regions ITS, ITS1, ITS2 and the chloroplast plastid gene psbA-trnH. Sequence alignment revealed 26% polymorphic sites in ITS, 30% in ITS1, 16% in ITS2 and 6% in psbA-trnH, respectively. Additionally, a phylogenetic tree was constructed for 15 species using ITS sequences which clearly distinguished B. diffusa from the other species. The ITS1 demonstrates a higher transition/transversion ratio, percentage of variation and pairwise distance which differentiate B. diffusa from other species of Boerhavia. Our study revealed that ITS and ITS1 could be used as potential candidate regions for identifying B. diffusa and for authenticating its herbal products.