丝状真菌深黄被孢霉RNA的提取方法

本文在一步法的基础上,提出了一种适合于富含RNase和多糖的丝状真菌的RNA提取方法。该方法可得到完整、均一的RNA样品,且简化了操作,同时建立起一套快速有效的RNA样品质量检验的方法。     

仿刺参体壁总RNA提取方法的建立

目的:通过对TRIzol一步法进行改进,建立一种从富含胶原蛋白、多糖及色素的仿刺参体壁提取总RNA的有效方法。方法:样品在液氮中研磨并用TRIzol匀浆后再进行抽提;对TRIzol一步法提取的总RNA进行DNaseⅠ消化和酚氯仿抽提,用2.5mol/L的醋酸钾沉淀,并加入适量糖原(10mg/mL)与RNA共沉淀。结果:琼脂糖凝胶电泳和紫外分光光度法以及RT-PCR检测结果表明,改进的方法能够有效去除基因组DNA、蛋白、多糖及色素的污染,RNA的产率提高。结论:制备的总RNA纯度高,完整性好,能够满足mRNA差异显示RT-PCR等分子生物学研究的要求,是一种提取仿刺参体壁及其他富含黏多糖、胶原蛋白和色素的动物组织总RNA的有效方法。     

非洲菊花瓣总RNA提取方法的改进

利用异硫氰酸胍一步法和植物总RNA提取试剂盒（RNeasy Plant Mini Kit）提取非洲菊（Gerbera hybrida）花瓣中总RNA时存在多糖的干扰。实验中利用异硫氰酸胍一步法提取总RNA,在RNA沉淀后,再次加入适量变性液,冻融2次,再加热至45 ℃使RNA完全溶解;试剂盒提取时,适当延长各提取步骤的离心时间,并增加DEPC H2O溶解RNA的时间。通过以上操作方法的改进可排除多糖的干扰,得到高质量的总RNA。为进一步利用Northern杂交技术研究非洲菊中花色素苷基因的表达,进行花色改良提供了方便、有效的实验手段。     

三七总RNA提取方法的对比研究

比较利用改进的异硫氰酸胍一步法、异硫氰酸胍高盐法、CTAB法和Thomas’RNA提取法等4种方法提取三七根茎2个部位总RNA的可行性。结果表明,改进的异硫氰酸胍一步法和异硫氰酸胍高盐法能有效地抑制酚类物质、多糖及皂苷等次级代谢产物对总RNA的影响,可从三七根茎中获得质量高、完整性好的总RNA。RT—PCR分析显示提取的总RNA具有反转录活性。这2种方法具有快速、简单、有效的特点。     

新生隐球菌总RNA抽提方法的实验研究

目的探讨快速获取高质量的新生隐球菌总RNA的实验方法。方法选取新生隐球菌的荚膜株、荚膜缺陷株,分别设计采用4种方法提取总RNA:酸洗玻璃珠法、液氮研磨法、异硫氰酸胍一步法、冷酸洗玻璃珠联合Yeast RNA kit法。用紫外线分光光度计测量其OD260、OD280的值,并且进行琼脂糖凝胶电泳,同时应用定量PCR法鉴定RNA质量。结果酸洗玻璃珠法、液氮研磨法、异硫氰酸胍一步法、冷酸洗玻璃珠联合Yeast RNA kit法的RNA产量分别为0.2μg/105细胞、0.4μg/105细胞、0.1μg/105细胞、0.6μg/105细胞。结论冷酸洗玻璃珠联合Yeast RNA kit法提取的RNA均一性和完整性最好,是简便、快捷地提取具有荚膜和细胞壁双重屏障的新生隐球菌RNA的理想方法。     

改良手工显微切割法获取特定细胞提取高质量RNA

探讨显微切割过程中有效保持RNA完整性的组织固定方法,建立一种简易的手工显微切割法.应用自制“T形板”辅助冰冻切片,100％无水乙醇一次性脱水固定,“排除切割法”获取目的细胞,用TRIzol提取RNA,琼脂糖凝胶电泳和RT-PCR分析RNA质量.“一步法”固定可长时间保存RNA的完整性;从食管癌标本5个特定阶段的细胞中提取的RNA,经电泳和RT-PCR分析均具有较高的质量.无水乙醇“一步法”固定,在显微切割的过程中可有效保持RNA的完整性;T形板和“排除切割法”简化了手工显微切割的操作,提取的RNA质、量均可满足后续分子水平研究的需要.     

从棉铃虫体中提取总RNA的一种有效方法

昆虫组织细胞中含有大量的RNA酶 ,在提取其RNA时 ,防止RNA酶的降解 ,是保证所得RNA片段完整的关键。目前提取动物组织细胞总RNA的方法主要采用“异硫氰酸胍 酚 氯仿抽提”一步法操作 ,但从昆虫组织细胞中提取RNA尚无明确的方法。本实验根据昆虫组织细胞中RNA的分子结合其它蛋白等次生物质的特性不同 ,适当的调整该方法 ,从棉铃虫中提取到了完整、无降解、纯度高的RNA ,适用于Northern杂交和cDNA合成等分子生物学操作     

两种核酸提取方法对小鼠诺如病毒RNA提取效能的比较

目的比较两种核酸提取方法对小鼠诺如病毒RNA的提取效能。方法用Trizol提取法和QIAamp Vira lRNA Min iKit提取法分别提取感染小鼠诺如病毒（Murine Norovirus,MNV）的小鼠小肠组织样品RNA和细胞培养物RNA,测定RNA浓度;用MNV特异的引物对分离的核酸样品进行一步法RT—PCR扩增。结果Trizol提取法提取小肠组织的RNA浓度高于QIAamp Viral RNA Mini Kit提取法;QIAamp Viral RNA Mini Kit提取得到的细胞培养物RNA浓度高于Trizol提取法。经QIAamp Viral RNA Mini Kit提取的两种核酸样品均能扩增出特异条带,而Trizol提取的核酸样品未见特异条带。结论在MNV的检测中,QIAampViralRNAKit更适合组织样品中MNV病毒核酸的提取。     

莲藕组织总RNA的快速提取方法

莲藕组织富含多糖、脂质、酚类等物质,用一般的方法较难提取高质量的RNA。在改进前人方法的基础上,建立了一种高效、简单的CTAB-LiCl提取法,能快速提取高质量的莲藕组织总RNA,并且产率高、完整性好、纯度高,能进一步满足RT-PCR等分子生物学实验的需要。此外,该方法也适用于其它富含多糖、脂质、酚类等物质的植物组织总RNA的提取。     

一种改进的沙蒿总RNA的提取方法

介绍了一种适用于沙蒿总RNA提取的方法。此方法有效地克服了沙蒿中富含的多糖类物质———沙蒿胶对总RNA提取的干扰。运用此方法所提取的RNA纯度高 ,完整性较好 ,可满足多数分子生物学实验的需要。     

家蝇cDNA文库的构建

自Ｂｏｍａｎ小组 (Ｓｔｅｉｎｅｒ ,1981)从惜古比天蚕(Ｈｙａｌｏｐｈｏｒａｃｅｃｒｏｐｉａ)中分离、纯化出第一种抗菌肽天蚕素以来 ,人们已在昆虫和其他无脊椎动物中发现了 170多种抗菌肽 (Ｌｏｗｅｎｂｅｒｇｅｒｅｔａｌ ,1999)。目前 ,人们不仅搞清楚了多数抗菌肽的氨基酸序列、结构和功能特点 ,而且还对一些抗菌肽的基因进行了克隆 (陈留存和王金星 ,1999)。我们以家蝇为材料 ,分离、纯化出了抗菌肽 ,在此基础上 ,构建了经过诱导的家蝇ｃＤＮＡ文库 ,以克隆其基因。1　材料和方法1 1　实验材料家蝇 (Ｍｕｓｃａｄｏｍｅｓｔｉｃａ)…     

Effect of the entomopathogenic fungus,Entomophthora muscae (Zygomycetes: Entomophthoraceae), on sex pheromone and other cuticular hydrocarbons of the house fly,Musca domestica

House fly (Musca domestica) males are highly attracted to dead female flies infected with the entomopathogenic fungus Entomophthora muscae. Because males orient to the larger abdomen of infected flies, both visual and chemical cues may be responsible for the heightened attraction to infected flies. Our behavioral assays demonstrated that the attraction is sex-specific-males were attracted more to infected females than to infected males, regardless of cadaver size. We examined the effect of E. muscae on the main component of the house fly sex pheromone, (Z)-9-tricosene, and other cuticular hydrocarbons including n-tricosane, n-pentacosane, (Z)-9-heptacosene, and total hydrocarbons of young (7 days old) and old (18 days old) virgin females. Young E. muscae-infected female flies accumulated significantly less sex pheromone and other hydrocarbons on their cuticular surface than uninfected females, whereas the cuticular hydrocarbons of older flies were unaffected by fungus infection. These results suggest that chemical cues other than (Z)-9-tricosene, visual cues other than abdomen size, or a combination of both sets of cues might be responsible for attraction of house fly males to E. muscae-infected females.     

Characterization of the nicotinic acetylcholine receptor subunit gene Mdalpha2 from the house fly, Musca domestica

A nicotinic acetylcholine receptor (nAChR) subunit gene, Mdalpha2, was isolated and characterized from the house fly, Musca domestica. This is the first nAChR family member cloned from house flies. Mdalpha2 had a cDNA of 2,607 bp, which included a 696 bp 5'-untranslated region (UTR), an open reading frame of 1,692 bp, and a 219 bp 3'-UTR. Its deduced amino acid sequence possesses the typical characteristics of nAChRs. Mdalpha2 genomic sequence was 11.2 kb in length in the aabys strain and 10.9 kb in the OCR strain, including eight exons and seven introns. Based on the deduced amino acid sequence, Mdalpha2 had the closest phylogenetic relationship to the Drosophila melanogaster Dalpha2 and Anopheles gambiae Agamalpha2, and a similar genomic structure to Dalpha2. Quantitative real-time PCR analysis showed that Mdalpha2 is expressed in the head and the thorax at 150- and 8.5-fold higher levels than in the abdomen. Linkage analysis of a Mdalpha2 polymorphism indicates this gene is on autosome 2. The importance of these results in understanding the diversity and phylogenetic relationships of insect nAChRs, the physiology of nAChRs in the house fly, and the utility of nAChR sequences in resistance detection/monitoring is discussed.     

Differential expression of CYP6A5 and CYP6A5v2 in pyrethroid-resistant house flies, Musca domestica

Two cytochrome P450 alleles, CYP6A5 and CYP6A5v2, were isolated from a pyrethroid-resistant house fly stain, ALHF. The two alleles shared 98% similarity in amino acid sequence. To understand the importance of these two alleles in resistance and examine the expression profile of the two alleles between resistant and susceptible strains, quantitative real-time PCR (qRT-PCR) was performed and compared with the Northern blot analysis. We found that qRT-PCR was an efficient method to characterize the expression profiles between these two sequence-closely-related P450 genes between resistant and susceptible houses flies. One of them, CYP6A5v2, was constitutively overexpressed in ALHF house flies compared with susceptible house fly strains. Moreover, this gene was predominantly expressed in the abdominal tissues of ALHF, in which the primary detoxification organs of insects are located. However, there was no significant difference in the expression of CYP6A5 between ALHF and susceptible house flies. The genetic linkage analysis was conducted to determine the possible link between the constitutively overexpressed CYP6A5v2 and insecticide resistance. CYP6A5v2 was mapped on autosome 5, which is correlated with the linkage of resistance in ALHF. Taken together, the study suggests the importance of CYP6A5v2 in increasing metabolic detoxification of insecticides in ALHF. The distinct expression of CYP6A5 and CYP6A5v2 in resistant and susceptible house flies implies the functional difference of theses two genes in house flies and suggests that they are two recently diverged P450 genes presented in a single organism.     

Effects of horn fly and house fly (Diptera: Muscidae) larvae on the development of parasitic nematodes in bovine dung

Laboratory studies were conducted to determine the effects of horn fly, Haematobia irritans (L.), and house fly, Musca domestica L., larvae on the development of a mixed population of parasitic nematodes in compressed and crumbled bovine dung. Fresh dung (100 g per sample) from a single calf passing trichostrongyle type eggs was infested with 150 horn fly or 150 house fly eggs. After 14-15 d, more horn flies and house flies had emerged from the compressed dung than from the crumbled dung, but more third stage parasitic nematode larvae were recovered from the crumbled dung containing either fly species than from dung containing no flies.     

Biological control of house flies Musca domestica and stable flies Stomoxys calcitrans(Diptera: Muscidae) by means of inundative releases of Spalangia cameroni(Hymenoptera: Pteromalidae)

The efficacy of the pupal parasitoid Spalangia cameroni Perkins as a biological control agent was tested against house flies Musca domestica Linnaeus and stable flies Stomoxys calcitrans (Linnaeus) in one dairy cattle and two pig installations in Denmark. Weekly releases of S. cameroni from April through to September-October 1999 and 2000 resulted in significant suppressions of house fly populations to below nuisance level, whereas no effect on stable flies was found. Parasitism was significantly higher in the release years compared to the control years, but was below 25% averaged over the fly season for each farm. A statistical model based on a functional relationship between the innate capacity of increase of the two fly species and three explanatory variables (air temperature, fly density and parasitism) provided a fairly good fit to data with the abundances of house flies and stable flies explained mostly by temperature, but intra- and interspecific competition, and parasitism had a significant effect as well. Overall, the model was capable of explaining 14% and 6.6% of the total variation in data for house fly and stable fly, respectively. Spalangia cameroni was the predominant parasitoid to emerge from exposed house fly pupae, but from mid summer onwards Muscidifurax raptor Girault & Sanders (Hymenoptera: Pteromalidae) was also quite common. The study indicated that biological control of house flies can be an efficient alternative to chemical control.     

Parasitism rates of Muscidifurax raptorellus and Nasonia vitripennis (Hymenoptera: Pteromalidae) after individual and paired releases in New York poultry facilities

Commercially reared parasitoids were released into three high-rise, caged-layer poultry houses; one house received only N. vitripennis Walker, the second house received only M. raptorellus Kogan & Legner, and the third house received an equal ratio of both species. Overall, house fly parasitism by M. raptorellus was never higher than 7% in any house. Most parasitism in the M. raptorellus release house was attributed to N. vitripennis. Parasitism of house fly pupae by M. raptorellus did not significantly increase during or after the 6-wk release period in the house that received both parasitoids. However, a depression in total parasitism was not detected when releases of the two species were made in this house.     

Visual targets for capture and management of house flies, Musca domestica L.

House flies and stable flies were collected on a Florida dairy farm using a commercial Alsynite sticky cylinder trap that was either used alone or covered with white, blue, or black outdoor awning fabric. Collections of both species of flies were highest on exposed Alsynite (house flies, 506.2 flies/day; stable flies, 19.1) followed by blue fabric (house flies, 308.1 flies/day; stable flies 12.5). Responses of both species to white and black fabric were 70% lower than to either of the former materials. When blue fabric was used to cover 50% of the surface area of Alsynite cylinders, house fly responses were significantly higher (290.2 flies/day) than to blue fabric alone (165.2); stable fly responses to the bi-colored target were significantly higher (152.6) than to Alsynite alone (93.8). Comparison of fly counts in the blue-covered versus uncovered Alsynite with traps of a single material indicated that house fly attraction to blue fabric was enhanced by the presence of clear Alsynite, whereas stable fly attraction to Alsynite was enhanced by the presence of blue fabric. The presence of blue+Alsynite visual targets increased collections of house flies in pans of dry fly bait but not in baited jug traps. Visual targets treated with 1.2% bifenthrin controlled >50% and 90% of house flies in large cages by days two and four after placement, respectively.     

Phylogenetic characterization of bacteria in the gut of house flies (Musca domestica L.)

House flies (Musca domestica L.) are cosmopolitan, ubiquitous, synanthropic insects that serve as mechanical or biological vectors for various microorganisms. To fully assess the role of house flies in the epidemiology of human diseases, it is essential to understand the diversity of microbiota harbored by natural fly populations. This study aimed to identify the diversity of house fly gut bacteria by both culture-dependent and culture-independent approaches. A total of 102 bacterial strains were isolated from the gut of 65 house flies collected from various public places including a garden, public park, garbage/dump area, public toilet, hospital, restaurant/canteen, mutton shop/market, and house/human habitation. Molecular phylogenetic analyses placed these isolates into 22 different genera. The majority of bacteria identified were known potential pathogens of the genera Klebsiella, Aeromonas, Shigella, Morganella, Providencia, and Staphylococcus. Culture-independent methods involved the construction of a 16S rRNA gene clone library, and sequence analyses supported culture recovery results. However, additional bacterial taxa not determined via culture recovery were revealed using this methodology and included members of the classes Alphaproteobacteria, Deltaproteobacteria, and the phylum Bacteroidetes. Here, we show that the house fly gut is an environmental reservoir for a vast number of bacterial species, which may have impacts on vector potential and pathogen transmission.