Identification of Cultured Brachionus Rotifers Based on RFLP and SSCP Screening

The marine finfish industry worldwide depends greatly on the mass culture of Brachionus rotifers. Recently, molecular data have revealed a more complicated view about the species status of Brachionus rotifers than previous mainly morphological assessments. Under this view, Brachionus rotifers are comprised of many morphologically similar, albeit genetically differentiated, cryptic members of larger groups. A redefinition of the cultured rotifer species/biotypes is therefore needed if aquaculture is to reach higher levels of standardization and predictability. In this work, restriction fragment length polymorphism (RFLP) and single-strand conformational polymorphism (SSCP) methods are applied to the COI and 16S rRNA mitochondrial genes. A detailed COI restriction map was constructed, using sequence data from all known representatives of Brachionus phylogroups. Therefore, it is the first time that such an extended restriction database has been produced. Several restriction endonucleases are proposed for the discrimination of the different Brachionus species/biotypes. Furthermore, eight different SSCP gel alleles are described for the 16S region. Using these data, five Brachionus species/biotypes were identified in 78 samples collected from laboratories and hatcheries around the world. Spiros Papakostas and Stefania Dooms contributed equally to this work.     

Space and time distribution of zooplankton in a Mediterranean lagoon (Etang de Berre)

In the Berre lagoon, a large brackish and swallow area near Marseille, the environmental factors (temperature, salinity, oxygen, suspended particulate matter and chlorophyll) generally display strong space and time variations. The rotifer Brachionus plicatilis and the copepod Acartia tonsa constitute the bulk of the zooplankton population during all the year. Their space and time distributions were studied in 23 stations distributed all over the lagoon, during four seasonal cruises (February, June, October, November), at surface and bottom layers. There is no marked difference in the horizontal and vertical distribution of the two species, (except in November when rotifers were prevailing in surface and copepods at depth) and in their time occurence. When the four series of data are pooled, correlation analysis show that A.tonsa is positively correlated with temperature, salinity and seston and negatively to oxygen and chlorophyll. B. plicatilis is positively correlated with temperature and seston, but also with chlorophyll, while salinity has a negative effect. The specific eggs number of both species is chlorophyll dependent. Considering seasonal cruises separately, some differences appear in the sense or the significance of these different correlations. The respective distribution of the two species is only partly dependent on the variation of the environmental factors: most of the variance remains unexplained, as indicated by the result of a stepwise multiple regression analysis using the most significant factors (temperature, salinity and oxygen explain 33 to 42% of the variance in Acartia, while temperature and salinity explain 27 to 28% of the variance in Brachionus). Thus, internal behavioral factors could also play a role in the distribution of organisms, particularly in some cases of aggregations of organisms observed during this study. As the two species occupied the same space habitat most of the year, they are potentially in competition for food. A way to optimize the food utilization could be the time separation of their feeding activity, nocturnal in Acartia and diurnal in Brachionus. Another way could be selective feeding upon food particles depending on their size (Brachionus being able to use finer particles than Acartia) or their quality (Brachionus being more herbivorous than Acartia) as demonstrated in some grazing experiments carried out in parallel.     

A Multiplex PCR Method for Rapid Identification of Brachionus Rotifers

Cryptic species are increasingly being recognized in many organisms. In Brachionus rotifers, many morphologically similar yet genetically distinct species/biotypes have been described. A number of Brachionus cryptic species have been recognized among hatchery strains. In this study, we present a simple, one-step genetic method to detect the presence of those Brachionus sp. rotifers that have been found in hatcheries. With the proposed technique, each of the B. plicatilis sensu stricto, B. ibericus, Brachionus sp. Nevada, Brachionus sp. Austria, Brachionus sp. Manjavacas, and Brachionus sp. Cayman species and/or biotypes can be identified with polymerase chain reaction (PCR) analysis. Based on 233 cytochrome c oxidase subunit I sequences, we reviewed all the available cryptic Brachionus sp. genetic polymorphisms, and we designed six nested primers. With these primers, a specific amplicon of distinct size is produced for every one of the involved species/biotypes. Two highly sensitive protocols were developed for using the primers. Many of the primers can be combined in the same PCR. The proposed method has been found to be an effective and practical tool to investigate the presence of the above six cryptic species/biotypes in both individual and communal (bulk) rotifer deoxyribonucleic acid extractions from hatcheries. With this technique, hatchery managers could easily determine their rotifer composition at the level of cryptic species and monitor their cultures more efficiently. Kalliopi Vasileiadou and Spiros Papakostas contributed equally to this work.     

Taxonomy ofHordeum caespitosum,H. jubatum,andH. lechleri (Poaceae: Triticeae)

Hordeum caespitosum Scribner,H. jubatum L., andH. lechleri (Steudel)Schenck are very similar in appearance and therefore until recently were mostly not recognized as separate entities. The first two are tetraploid and natives to North America, but the second occurs naturally in eastern Siberia and has been introduced in Europe and South America and may become a cosmopolitan weed. The third is hexaploid and South American. This study analyses their morphological diversity by means of selected multivariate techniques in order to determine if there is justification to recognize them as three separate morphological species. Logistic discrimination, although based on a reduced set of characters, yielded the highest percent of correct assignments. A linear discriminant function is provided and validated by 100 bootstrap repeats. Canonical discriminant analysis indicated three groups. It is subsequently concluded that the three are separate morphological species. Although a linear discriminant function is given, a traditional identification key is provided based on the palea length and triad (the group of three spikelets at each rachis node) length.     

Pollinator attracting odour signals in sexually deceptive orchids of the Ophrys fusca group

We investigated patterns of volatiles of several allopatric and sympatric species of the Ophrys fusca group and one species of the O. mammosa/sphegodes group pollinated by either Andrena nigroaenea or A. flavipes, using electrophysiology (gas chromatography coupled with electroantennography; GC-EAD) and chemical analyses. We found 52 GC-EAD active compounds, mainly saturated and unsaturated hydrocarbons with chain lengths of 21 to 31, aldehydes, an ester, and an acid. Based on the relative proportions of all GC-EAD active compounds, the investigated species were compared using various statistical methods (ANOVA, principle component analyses, discriminant function analyses and cluster analyses). Our results show that Ophrys species with the same pollinator – independent of their phylogenetic relationship–use the same volatiles for pollinator attraction. Differences between the species mainly involve different quantitative patterns of volatiles. Our results are in congruence with previous studies that showed different odour bouquets to be responsible for the specific attraction of different pollinators and that alkanes and alkenes are most important for pollinator attraction.     

Characterization of Armillaria spp. from peach orchards in the southeastern United States using fatty acid methyl ester profiling

Limited information is available regarding the composition of cellular fatty acids in Armillaria and the extent to which fatty acid profiles can be used to characterize species in this genus. Fatty acid methyl ester (FAME) profiles generated from cultures of A. tabescens, A. mellea, and A. gallica consisted of 16–18 fatty acids ranging from 12–24 carbons in length, although some of these were present only in trace amounts. Across the three species, 9-cis,12-cis-octadecadienoic acid (9,12-C18:2), hexadecanoic acid (16:0), heneicosanoic acid (21:0), 9-cis-octadecenoic acid (9-C18:1), and 2-hydroxy-docosanoic acid (OH-22:0) were the most abundant fatty acids. FAME profiles from different thallus morphologies (mycelium, sclerotial crust, or rhizomorphs) displayed by cultures of A. gallica showed that thallus type had no significant effect on cellular fatty acid composition (P > 0.05), suggesting that FAME profiling is sufficiently robust for species differentiation despite potential differences in thallus morphology within and among species. The three Armillaria species included in this study could be distinguished from other lignicolous basidiomycete species commonly occurring on peach (Schizophyllum commune, Ganoderma lucidum, Stereum hirsutum, and Trametes versicolor) on the basis of FAME profiles using stepwise discriminant analysis (average squared canonical correlation = 0.953), whereby 9-C18:1, 9,12-C18:2, and 10-cis-hexadecenoic acid (10-C16:1) were the three strongest contributors. In a separate stepwise discriminant analysis, A. tabescens, A. mellea, and A. gallica were separated from one another based on their fatty acid profiles (average squared canonical correlation = 0.924), with 11-cis-octadecenoic acid (11-C18:1), 9-C18:1, and 2-hydroxy-hexadecanoic acid (OH-16:0) being most important for species separation. When fatty acids were extracted directly from mycelium dissected from naturally infected host tissue, the FAME-based discriminant functions developed in the preceding experiments classified all samples (n = 16) as A. tabescens; when applied to cultures derived from the same naturally infected samples, all unknowns were similarly classified as A. tabescens. Thus, FAME species classification of Armillaria unknowns directly from infected tissues may be feasible. Species designation of unknown Armillaria cultures by FAME analysis was identical to that indicated by IGS-RFLP classification with AluI.     

Effect of pH on survival,reproduction, egg viability and growth rate of five closely related rotifer species

In the laboratory we examined the effect of pH (5–10 with one interval) on survival, reproduction, egg viability and growth rate (intrinsic growth rate—r _m and population growth rate—r) of five Brachionus rotifer species (B. calyciflorus, B. quadridentatus, B. urceolaris, B. patulus and B. angularis). The pH was shown to exert a major influence on egg viability and growth rate (r _m and r) for each species. The age-specific survivorship curves within a species were not significantly different at pH 6–10. The optimal pH for each species is near-neutral pH (pH 6–8), and the fecundity decreased as the pH deviated from these values. For each Brachionus species, there was no significant difference between age-specific fecundity curves at pH 7 and 8. At acid pH (pH 5 or 6) higher egg mortality was observed for each species. The r _m and population r of the five Brachionus species incubated at different pHs were significantly influenced by pH. The pH supporting the highest r _m or r was obtained at pH 6–8, but varied due to species. In this study B. urceolaris and B. patulus could tolerate a broad range of pH, while the populations of B. calyciflorus, B. quadridentatus and B. angulari declined at acid conditions.     

樟子松固沙林更新迹地草本植物多样性及其对土壤理化性质的影响

以科尔沁沙地南缘的彰武县章古台万亩林为研究对象,野外取样调查和实验室检测分析相结合,以樟子松固沙林采伐迹地为对照,研究不同植被恢复类型下樟子松固沙林更新迹地生境的改良效果,探讨植被重建后植物多样性及土壤理化性质的响应。结果表明:1)樟子松(Pinus sylvestris)固沙林更新迹地植被重建后,草本植物物种多样性增加,林下植物偶见种数目增多,13种草本植物在8个样地中未重复出现;2)与采伐迹地相比,不同植被重建类型土壤理化性质均有所改善,土壤容重、田间持水量、有机质、全氮、碱解氮、速效钾在彰武小钻杨(Populus xiaozhuanica)、五角枫(Acer mono)林地改良效果较好,全钾在红刺榆林(Hemiptelea davidii)地含量明显提高、山杏(Armeniaca sibirica)林地的有效磷相比采伐迹地明显提高,且均表现为上层改良效果优于下层;3)不同植被恢复类型土壤理化性质间存在显著差异,随着物种多样性的增加,土壤理化性质逐渐改善,土壤容重、田间持水量、有机质、全磷与植物多样性具有显著的相关性,土壤理化性质的与植物多样性相互作用,共同促进生态系统正向演替。研究结果为控制科尔沁沙地土壤沙化,加速该区生态系统的恢复与重建提供理论依据。     

The ecology of Potamogeton species in central North America

The distribution of 17 Potamogeton species was examined at 430 sites in central North America with respect to water body type, bottom substrate and 8 water chemistry parameters (pH, total dissolved solids, total alkalinity, chloride, sulphate, phosphorus, combined nitrate and nitrite, and dissolved organic matter). All except 2 of the species showed statistically significant distributions with respect to some of the environmental parameters examined. Each species occupied a different combination of chemical parameter ranges. The species formed a distribution spectrum with respect to water chemistry, with P. epihydrus and P. obtusifolius frequenting low inorganic concentrations at one end of the scale, and P. filiformis, P. pectinatus and P. vaginatus at the other end, these species characterized by high mean inorganic values and occurring most often in saline or alkaline habitats. While 41 significant positive interspecific associations were found within the genus in lentic waters, only 4 were apparent in lotic habitats. Potamogeton species richness (PR) was related to water body and bottom type, with lakes and sand bottoms showing the highest mean PR values. Stepwise multiple regression analysis showed that, in the area as a whole, the water chemistry parameters examined accounted for <25% of the observed variability in PR. The relative importance of individual chemical parameters in relation to PR varied in different water body types.     

Chemodiversity of Essential Oils from Nine Species of Celastraceae

Extracts and compounds obtained from several species of Celastraceae family are reported as potential sources of drugs due to their diverse pharmacological properties. Nevertheless, essential oil composition from these species is still little known. This work aimed at the analysis of essential oils obtained from different Brazilian Celastraceae species. A total of seventeen oils were obtained using hydrodistillation process and analyzed by gas chromatography/mass spectrometry (GC/MS). Principal component analysis (PCA) allowed the identification of a chemical composition pattern among the analyzed essential oils. Some compounds were more frequent among Celastraceae species, such as cis‐ and trans‐linalool oxide (14/17 oil samples), nerylacetone (13/17), linalool (11/17), β‐ionone (10/17), α‐ionone (9/17), nerolidol (10/17), decanal (10/17), and dodecanoic acid (10/17). These results contribute to the chemophenetics of Celastraceae species.     

三江平原典型沼泽湿地螺类组成生态指示

螺类作为湿地的重要生物类群,对环境变化响应敏感,这使得螺类成为潜在的环境指示物种。为了研究中国东北沼泽湿地不同类型湿地螺类群落结构的差异以及螺类作为不同类型湿地指示物种的可能,在2014年9月和2015年5月对小叶章沼泽化草甸湿地、臌囊苔草湿地、毛苔草湿地、漂筏苔草湿地共17个采样点进行螺类样品采集。共采集到了螺类8科13属17种4452个。研究表明,螺类以扁卷螺科Planorbidae、椎实螺科Lymnaeidae、膀胱螺科Physidae为主;4种不同类型湿地螺的种类组成不同,这些螺类的种类组成与不同类型湿地的水深、植物类型组成等湿地特征是相对应。螺类的生物多样性指数(ShannonWiener指数和Marglef指数)在不同类型湿地之间也存在一定差异,筛选了指示螺类6种,无褶螺是小叶章沼泽化草甸的指示物种,小土蜗、半球多脉扁螺和虹蛹螺是臌囊苔草湿地的指示物种,琥珀螺是毛苔草湿地的指示物种,平盘螺是漂筏苔草湿地的指示物种,这表明了螺类是沼泽湿地类型的重要指示生物。也为螺类生物多样性资源的保护、恢复和生态评价提供科学依据和资料积累。     

Site History and Edaphic Features Override the Influence of Plant Species on Microbial Communities in Restored Tidal Freshwater Wetlands

Restored wetland soils differ significantly in physical and chemical properties from their natural counterparts even when plant community compositions are similar, but effects of restoration on microbial community composition and function are not well understood. Here, we investigate plant-microbe relationships in restored and natural tidal freshwater wetlands from two subestuaries of the Chesapeake Bay. Soil samples were collected from the root zone of Typha latifolia, Phragmites australis, Peltandra virginica, and Lythrum salicaria. Soil microbial composition was assessed using 454 pyrosequencing, and genes representing bacteria, archaea, denitrification, methanogenesis, and methane oxidation were quantified. Our analysis revealed variation in some functional gene copy numbers between plant species within sites, but intersite comparisons did not reveal consistent plant-microbe trends. We observed more microbial variations between plant species in natural wetlands, where plants have been established for a long period of time. In the largest natural wetland site, sequences putatively matching methanogens accounted for ∼17% of all sequences, and the same wetland had the highest numbers of genes coding for methane coenzyme A reductase (mcrA). Sequences putatively matching aerobic methanotrophic bacteria and anaerobic methane-oxidizing archaea (ANME) were detected in all sites, suggesting that both aerobic and anaerobic methane oxidation are possible in these systems. Our data suggest that site history and edaphic features override the influence of plant species on microbial communities in restored wetlands.     

FO-spectra of chlorophyll fluorescence for the determination of zooplankton grazing

In the PHYTO-PAM phytoplankton analyzer the minimal fluorescence of dark-adapted samples (F₀) was assessed, which gives direct information on the chlorophyll-a content. Clearance rates (CR) of Daphnia and Brachionus were calculated from a decrease in chlorophyll-a concentration using the PHYTO-PAM fluorometer for non-sacrificial sampling of chlorophyll-a. Clearance rates of Daphnia were measured and compared with those based on the cell-counts method using an electronic particle counter (Coulter counter). Chlorophyll fluorescence-based CR for Daphnia magna were very strongly correlated with Coulter-based CR, signifying the potential suitability of the PHYTO-PAM in grazing experiments. A procedure for determination of rotifer clearance rates was developed and the effects of rotifer density, duration of the grazing period, and food concentration on CR were investigated. Between 10 and 30 rotifers in 2.5 ml food suspension (i.e. 4–12 rotifers per ml) appeared optimal for calculating CR. The application of the deconvolution of F₀-spectra in food selectivity experiments was evaluated using various mixtures of the green alga Scenedesmus obliquus and the cyanobacterium Microcystis aeruginosa fed to Brachionus. CR for Brachionus on M. aeruginosawere lower than on S. obliquusbut this was not caused by toxicity, because no mortality was observed. The higher CR on Scenedesmus than on Microcystis in the mixtures suggested selectivity. The importance of digital suppression of background fluorescence is highlighted in additional experiments with Daphnia feeding on mixtures of Microcystis and Scenedesmus, or on Microcystis alone. Without background correction of filtered samples, negative clearance rates were obtained for the `blue' Microcystis signal. Soluble fluorescing compounds of cyanobacterial origin, phycocyanin, were released from the Daphniaand contributed 40% to the overall-fluorescence. Deconvolution of F₀-spectra for the determination of chlorophyll-a using the PHYTO-PAM appears to be a suitable tool for determination of rotifer CR even at very low food concentrations. A drawback of the method is that rather high rotifer densities are required. The required grazing period, however, is shorter than for cell-count methods, the method is sensitive, clearance rates can be measured at low food concentrations (< 0.1 mg C l^–1) and information on selective feeding can be obtained.     

Fingerprint analysis of Lingzhi (<Emphasis Type="Italic">Ganoderma</Emphasis>) strains by high-performance liquid chromatography coupled with chemometric methods

A high-performance liquid chromatography (HPLC)-based system has been developed for generating chemical fingerprints of Lingzhi (Ganoderma). Data were evaluated statistically using hierarchical cluster analysis (HCA) and discriminant analysis (DA) in order to classify the samples and to identify key categorizing parameters. Fifteen representative Lingzhi strains (13 Ganoderma lucidum strains and one strain each of G. sinense and G. resinaceum), were separated into three groups using HCA at a rescaled distance of 10, thereby confirming divisions based on morphological characteristics. Furthermore, the 13 G. lucidum strains were separated into three groups at a rescaled distance of 5, which was consistent with previous results based on antagonism tests. Two types of discriminant functions were generated using six selected predictor variables. To our knowledge, this is the first demonstration of the feasibility and advantages of employing chromatographic fingerprinting, combined with HCA and DA, for the accurate identification and validation of feedstock strains used in the production of Lingzhi-based health foods and supplements.     

Competition between two planktonic rotifer species at different temperatures: an experimental test

1. The effect of temperature on the outcome of resource competition between two planktonic rotifers (Synchaeta pectinata and Brachionus calyciflorus) was investigated in laboratory experiments. In addition to the competition experiments, several physiological variables and their temperature‐dependence were characterised, including ingestion rate and starvation tolerance. 2. Because of a lower threshold food level (TFL) for population growth for the food algae Cryptomonas erosa, Synchaeta was predicted to be the superior competitor at low temperatures (12 °C). In contrast, Brachionus had a lower TFL at 20 °C and was predicted to be competitively superior at this temperature. 3. In both rotifer species, ingestion rates increased with temperature, but the increase was much more pronounced in Brachionus. Ingestion rates of Brachionus at temperatures from 8 to 24 °C were always higher than in Synchaeta (up to 4.6‐fold). 4. Starvation resistance reduced with temperature in both rotifer species. At all temperatures investigated (12, 16 and 20 °C) Brachionus could survive starvation for longer than Synchaeta. This difference was strongest at 12 °C (5.8 days versus 2.5 days). 5. In the first competition experiment, food was supplied at 48 h‐intervals. Brachionus displaced Synchaeta at both experimental temperatures (12 and 20 °C). Competitive exclusion of Synchaeta at the lower temperature was probably because of large fluctuations in algal densities that resulted from the long intervals between feeding, a condition that favoured Brachionus because of its higher starvation resistance. 6. In the second competition experiment, one third of the food suspension was renewed every 8 h, resulting in a much better approximation to a continuous resource supply. At 12 °C Synchaeta and Brachionus coexisted for more than 1 month and the densities of both rotifer species were significantly lower in the presence of their competitor. In contrast to expectations, Brachionus was able to persist even when Cryptomonas concentrations fell below its TFL. This was probably because Brachionus was using detritus and associated bacteria as additional food sources, which were present in the cultures during the later phase of the experiment. 7. Autocorrelation analysis of the temporal changes in egg ratios revealed significant periodic cycles in Synchaeta during the second competition experiment. A possible explanation for this is the fecundity schedule of Synchaeta, in which reproduction is highly concentrated in a few age classes. According to demographic theory, such a life cycle feature can cause slower convergence to a stable age distribution.     

Morphological plasticity of a spreading aquatic macrophyte,Ranunculus peltatus,in response to environmental variables

Ranunculus peltatus Schrank is an aquatic macrophyte spreading in northeastern France. As with other Ranunculus species, its growth demonstrates considerable plasticity. A preliminary understanding of its development and precise adaptive strategy is possible through functional ecology. The present study took morphological traits into account in order to analyse R. peltatus' development and morphological plasticity in relation to environmental parameters. During the five-month growing season, field measurements of ten different morphological traits were performed monthly at twelve sampling sites presenting various physical and chemical characteristics. Three overall growth stages occurred between April and August 2000: a stage of elongation of the main stem, a stage of branching and flowering and a stage of decline associated with vegetative dispersion. The sampling sites were defined according to environmental parameters and divided into three groups corresponding to three morphologically different R. peltatus populations. Plants in upstream, nutrient-poor, undisturbed sites were small and achieved little sexual reproduction. Plants in nutrient-rich, undisturbed sites had long shoots and were branched. Plants in weakly shaded, disturbed sites were small but produced many flowers. Correlations between morphological traits and environmental parameters showed significant relationships between chemical parameters and some characteristic vegetative growth traits. Physical environmental parameters were found to be less well correlated with morphological traits than the chemical parameters. The phenology and morphological plasticity of R. peltatus confer competitive advantages that could explain its ability to spread in some circumstances. Finally, the previous classification of R. peltatus as a Grime CSR species is discussed in relation to its plasticity. According to its morphological characteristics, R. peltatus tended indeed to adopt a C-strategy in nutrient-rich undisturbed sites, a S-strategy in nutrient-poor undisturbed sites and a R-strategy in disturbed sites.     

A phenetic study of Cassia sensu lato (Leguminosae-Caesalpinioideae: Cassieae: Cassiinae) in Thailand

Cassia L. sensu lato, a large heterogeneous genus of flowering plants, occurs naturally in the tropics around the world. Recent works based on floral morphology have supported a division of this genus into three genera, namely Cassia L. s. str., Chamaecrista Moench and Senna Mill. In order to investigate this new classification, 508 specimens of 18 taxa of the genus Cassia s.l. grown in Thailand were analyzed using cluster analysis and canonical discriminant analysis. The total 32 vegetative and reproductive morphological characters were employed in these analyses. In cluster analysis, Cassia s.l. can be separated into four groups, respectively viz. Chamaecrista, Senna alata, Senna and Cassia s /str. The four-cluster grouping is discussed. From a canonical discriminant analysis using the four-cluster grouping as a priori groups, it can be concluded that Cassia s. str., Senna, and Chamaecrista are indeed distinct taxa. The three most important characters that separate the three genera are filament length, fruit length, and ovary stalk length. These quantitative characters, together with some qualitative characters, were useful in constructing an identification key to these genera. Among the three genera, it was also found that Senna is rather a heterogeneous taxon. The difference between the studied species was discussed.     

The Rotifera of Malaysia and Singapore with remarks on some species

Summary An intensive and extensive sampling of all types of Malaysian and Singaporean freshwaters for zooplankton gave 165 species, sub-species and varieties of Rotifera, mainly belonging to the Monogononta. Bdelloida were rarely identified. The present records bring Malaysia and Singapore in line with other well studied tropical countries as far as Rotifera records are concerned. 7 new genera and over 50 species, subspecies, varieties and forms have been added to the Malaysian and Singaporean Rotifera records and interesting and marked morphological and size variation in species from previous records, have been noted.The richest (in species) fauna of Rotifera occurs in rice fields and ponds which have a seasonal succession of dry to wet conditions and vegetation which shelters the rotifers.The Malaysian and Singaporean Rotifera fauna is typically tropical with a dominance of the genus Brachionus over temperate genera like Keratella. Also very rare or missing are typical temperate genera like Ploesoma, Notholca and Synchaeta. The dominance of Brachionus in Malaysia is less evident than expected because only a very small proportion of samples were taken in limnetic situations where Brachionus clearly dominates in the tropics.     

青海湖3种类型高寒湿地甲烷氧化菌群落特征

【背景】甲烷氧化菌在维持湿地生态系统碳平衡方面发挥着重要作用,青海湖高寒湿地具有十分重要的生态地位,但目前有关该地区甲烷氧化菌的研究相对较少。【目的】探究不同类型高寒湿地土壤甲烷氧化菌的群落特征与驱动因素。【方法】以青海湖流域内的小泊湖沼泽湿地、鸟岛湖滨湿地、瓦颜山河源湿地为研究对象,通过高通量测序技术对土壤甲烷氧化菌进行检测。【结果】3种不同类型高寒湿地土壤甲烷氧化菌的优势菌门均为变形菌门(Proteobacteria)。鸟岛湖滨湿地与瓦颜山河源湿地的甲烷氧化菌α多样性存在显著差异(P<0.05),而小泊湖沼泽湿地与二者的甲烷氧化菌α多样性的差异不显著(P>0.05)。LEfSe分析表明,不同类型高寒湿地共存在40个差异菌群,尤以瓦颜山河源湿地差异菌群数量最多,从门到属水平均存在显著差异。冗余分析(redundancy analysis,RDA)表明,甲烷氧化菌菌群变化的主要驱动因子为土壤温度、土壤水分、电导率。【结论】整体而言,青海湖3种类型高寒湿地土壤理化性质及甲烷氧化菌群落多样性均存在差异,且部分菌群的相对丰度具有显著性差异(P<0.05)。     

Nesting habitat and nest features of Water Rails Rallus aquaticus and Little Crakes Zapornia parva on large wetlands

ABSTRACT

Capsule: In large and medium wetlands with extended reed beds Phragmites and cattail Typha dominated areas, Water Rails Rallus aquaticus and Little Crakes Zapornia parva show higher differences in nesting sites in contrast with other populations from small and fragmented wetlands, where the ranges of values for environmental variables at nesting sites overlap greatly.

Aims: To investigate the nesting sites and nesting habitats of both species to a fine scale, on medium and large wetlands, to evaluate the potential overlapping of nesting habitat and to compare data with those obtained in small wetlands.

Methods: In the study area, the Fize? Basin, Romania, 17 wetlands, ponds and reed beds ranging from 11.78 to 252.68 ha were investigated. The species were present on 4 wetlands, which were subsequently surveyed for nests. Between April and August 2010–2012, a total of 83 Water Rail and 46 Little Crake nests were found, measured and analysed in terms of nesting habitat and nest features.

Results: Principal component analyses suggest no overlap in nest site selection and a partial overlap in the nest features. An analysis of similarity confirmed significant nest structural differences. A discriminant function analysis highlights the main factors dividing the nest features of both species being: water depth and distance between the nest and a water surface. Little Crakes build their nests in cattail Typha sloped clumps, while Water Rails build their nests near reed Phragmites strains.

Conclusion: In large and medium wetlands, Water Rails nest deep in the reed bed rather than in other types of habitats, contrary to what has been reported for small ponds areas. Little Crakes nest in cattail independently of the size of the wetland where they occur.