K55R与ep8叠加突变对扩展青霉脂肪酶热稳定性的改善

利用重叠延伸PCR对扩展青霉脂肪酶(PEL)基因进行体外定点突变,构建了K55R与随机突变体ep8叠加突变的重组质粒pAO815-ep8-K55R。将该质粒电转化引入毕赤酵母(Pichia pastoris)GS115,进行异源表达。实验结果表明:该叠加突变体在毕赤酵母中获得了活性表达,得到表达产物脂肪酶PEL-ep8-K55R-GS。其表达量为508u/mL,分别约为野生型脂肪酶PEL-GS(627u/mL)的81%,随机突变脂肪酶PEL-ep8-GS(924u/mL)的55%;其比活力为2309.1u/mg,与随机突变脂肪酶PEL-ep8-GS和野生型脂肪酶PEL-GS的相仿。叠加突变脂肪酶PEL-ep8-K55R-GS的最适作用温度为37℃,与野生型脂肪酶PEL-GS和随机突变脂肪酶PEL-ep8-GS一致;其Tm值为41.0℃,比野生型脂肪酶PEL-GS提高了2.3℃,比随机突变脂肪酶PEL-ep8-GS提高了0.8℃。表明叠加突变脂肪酶PEL-ep8-K55R-GS的热稳定性有了进一步的提高。     

扩展青霉脂肪酶K56R叠加突变对热稳定性的影响

目的:扩展青霉脂肪酶随机突变体ep8是一株热稳定性比野生型有所提高的突变体.获得热稳定性提高的优良菌株.方法:在ep8的基础上利用重叠延伸PCR构建叠加突变重组质粒pPIC3.5K-ep8一K56R,将该质粒电转毕赤酵母(Pichia paaoris)GS115进行异源表达.结果:该叠加突变脂肪酶在毕赤酵母中获得了活性表达.15%SDS-PACE结果分析表明突变脂肪酶PEL-ep8-K56R-GS分子量与野生型PEL-GS一致,约为28kDa.叠加突变脂肪酶在37℃时酶活为852U/mL、野生型为760u/mL、随机突变体为824u/mL,叠加突变体酶活相比野生型提高了21.1%,相比随机突变体提高了3.4%.热稳定性分析数据表明叠加突变脂肪酶Tm值为40.1℃、野生型为38.7℃、随机突变体为39.9℃,Tm值相比野生型提高了1.4℃,相比随机突变体提高了0.2℃.     

基于易错PCR定向进化扩展青霉 Penicillium expansum FS1884碱性脂肪酶

为改善扩展青霉FS1884碱性脂肪酶的活性及酶学性质,利用连续两轮易错PCR对扩展青霉FS1884脂肪酶基因PEL进行随机突变,在大肠杆菌JM109中构建突变文库。含突变脂肪酶基因的重组质粒电击转化巴斯德毕赤酵母GS115,经过YPOM板初筛和橄榄油检验板复筛,获得一株酶活性提高的脂肪酶突变体:PEL-ep25-GS。与野生型脂肪酶PEL-GS相比,在最适温度40℃、pH9.4时突变体的酶活力是野生型酶的1.3倍。测序结果表明:该突变体第253位氨基酸发生了突变,由赖氨酸变成蛋氨酸。     

K202A突变对扩展青霉脂肪酶热稳定性的影响

利用易错PCR定向进化扩展青霉脂肪酶（PEL）,获得了一株热稳定性有所提高的随机突变体（ep8）,ep8包含有一个氨基酸的改变。为进一步提高其热稳定性,作者利用重叠延伸PCR法,以ep8基因为模板,将第202位赖氨酸突变为丙氨酸（K202A）,构建表达质粒pAO815-ep8-K202A。并将其引入毕赤酵母GS115构建叠加突变体(PEL-ep8-K202A)。同时以野生型lip07为模板构建单点突变体:PEL-lip07-K202A。15% SDS-PAGE 结果分析表明突变体分子量与野生型一致,约为28KD. 表达产物热稳定性分析结果表明: 野生型（PEL）的Tm值为39.03℃,而以野生型为模板进行定点突变得到的单点突变酶（PEL-lip07-K202A）,其Tm却降低了2℃,为37.08℃。叠加突变酶(PEL-ep8-K202A)的Tm为41.66℃, 比野生型酶提高2.63℃,比随机突变体ep8生产的酶（PEL-ep8）的Tm提高了1.21℃。     

P197E与ep8叠加突变对扩展青霉脂肪酶热稳定性的影响

为提高脂肪酶的热稳定性,作者利用重叠延伸PCR对扩展青霉脂肪酶(PEL)基因进行了体外定点突变,构建了P197E(即将第197位的脯氨酸突变为谷氨酸)与随机突变体ep8叠加突变的重组质粒pPIC3.5K-ep8-P197E。将该质粒电转化至毕赤酵母Pichiapastoris GS115中,进行异源表达。与野生型酶和单点突变酶PEL-ep8的酶学性质比较,结果表明:叠加突变体PEL-ep8-P197E在40°C温育处理30min后,残余酶活分别比野生型PEL和随机突变体PEL-ep8提高了42.13%和37.3%。叠加突变体PEL-ep8-P197E的Tm值为41.51°C,比野生型酶PEL提高了2.81°C,比随机突变体脂肪酶PEL-ep8提高了2.25°C。通过对脂肪酶PEL的叠加突变,提高了该酶的热稳定性,并为结构与功能的进一步研究提供了材料。     

扩展青霉脂肪酶ep8与R182K叠加突变体的构建

利用重叠延伸PCR法对扩展青霉碱性脂肪酶(PEL)基因进行体外定点突变,并将含突变基因的重组质粒pAO815-ep8-R182K在毕赤酵母(Pichiapastoris)GS115中进行表达。叠加突变体PEL-ep8-R182K表达产物与野生型PEL、PEL-ep8比较实验表明:叠加突变体表达蛋白PEL-ep8-R182K最适反应温度与野生型PEL、PEL-ep8一致,均为40℃;热稳定性与野生型相似,比PEL-ep8降低2.25℃。但是,在比活上,PEL-ep8-R182K与PEL-ep8、野生型PEL相比,其比酶活分别提高了14.03%和3.86%。     

D92P点突变对扩展青霉碱性脂肪酶最适作用温度的改善

利用重叠延伸PCR法对扩展青霉碱性脂肪酶(PEL)基因进行体外定点突变,并构建了含突变基因的重组质粒pPIC3．5K—lip-D92P。将该质粒在毕赤酵母GS115菌株中表达。与野生型表达产物PEL-GS相比较,突变体表达产物PELD92P—GS最适作用温度为45℃,比野生型提高了5℃;其热稳定性与野生型相当;突变体在40℃下的表达量为109U／mL,约为野生型的29％。结果分析表明,Pro替代Asp^92后,可能是由于Pro一级结构的特点,使酶结构更加稳定,在高温下更适于与底物结合。     

E83V对扩展青霉脂肪酶最适作用温度的影响*

利用重叠延伸PCR法对扩展青霉碱性脂肪酶(PEL)基因作了体外定点突变,获得了最适作用温度有所提高的突变体。含突变基因的重组质粒pPIC3.5K-lip-E83V在Pichiapastoris GS115中表达。对突变体表达产物PEL-E83V-GS与野生型表达产物PELGS作了比较:前者最适作用温度为45℃,比野生型提高了5℃;其热稳定性基本不变;突变体在37℃下的表达量为188U/mL,约为野生型的80%。最适作用温度的提高可能是由于83位亲水性的Glu用疏水性的Val取代,增加了脂肪酶     

E83V对扩展青霉脂肪酶最适作用温度的影响

利用重叠延伸PCR法对扩展青霉碱性脂肪酶(PEL)基因作了体外定点突变,获得了最适作用温度有所提高的突变体。含突变基因的重组质粒pPIC3．5K-lip-E83V在Pichia pastoris GS115中表达。对突变体表达产物PEL-E83V-GS与野生型表达产物PEL-GS作了比较：前者最适作用温度为45℃,比野生型提高了5℃;其热稳定性基本不变;突变体在37℃下的表达量为188U／mL,约为野生型的80％。最适作用温度的提高可能是由于83位亲水性的Glu用疏水性的Val取代,增加了脂肪酶表面的疏水作用,使其在高温下更适于与底物的结合。     

栓菌漆酶在毕赤酵母中高效表达及重组酶的性质

栓菌420（Trametes sp. 420）漆酶基因lacD以两种方式在巴斯德毕赤酵母（Pichia pastoris）进行异源表达,产生两种重组漆酶：rLacDx（具有天然N-末端）和rLacDe（N-末端带有8个额外的氨基酸残基）。摇瓶发酵18d,rLacDx和rLacDe的产量分别为1.21×10⁵u/L、7.38×10⁴u/L ［以2,2′-连氮-3-乙苯-二噻唑-6磺酸（ABTS）为底物］。在高密度发酵条件下,rLacDx的产量增加到2.39×10⁵u/L,同时其生产周期降至7.5 d。两种重组酶对愈创木酚底物的氧化特性相似,且在50℃和pH3～10的范围内均稳定。然而,rLacDx对底物ABTS的比活力（1761u/mg）高于rLacDe （1122u/mg）,其表观K_m值(427μmol/L)低于rLacDe (604μmol/L)。     

Astragalar morphology of late Eocene anthropoids from the Fayum Depression (Egypt) and the origin of catarrhine primates

The phylogenetic relationships of the late Eocene anthropoids Catopithecus browni and Proteopithecus sylviae are currently a matter of debate, with opinion divided as to whether these taxa are stem or crown anthropoids. The phylogenetic position of Catopithecus is of particular interest, for, unlike the highly generalized genus Proteopithecus, this taxon shares apomorphic dental and postcranial features with more derived undoubted catarrhines that appear in the same region 1-2 Ma later. If these apomorphies are homologous and Catopithecus is a stem catarrhine, the unique combination of plesiomorphic and apomorphic features preserved in this anthropoid would have important implications for our understanding of the crown anthropoid morphotype and the pattern of morphological character transformations that occurred during the early phases of stem catarrhine evolution.Well-preserved astragali referrable to Proteopithecus, Catopithecus, and the undoubted early Oligocene stem catarrhine Aegyptopithecus have provided additional morphological evidence that allows us to further evaluate competing hypotheses of interrelationships among Eocene-Oligocene Afro-Arabian anthropoids. Qualitative observations and multivariate morphometric analyses reveal that the astragalar morphology of Proteopithecus is very similar to that of early Oligocene parapithecids and living and extinct small-bodied platyrrhines, and strengthens the hypothesis that the morphological pattern shared by these taxa is primitive within crown Anthropoidea. In contrast, Catopithecus departs markedly from the predicted crown anthropoid astragalar morphotype and shares a number of apomorphic features (e.g., deep cotylar fossa, laterally projecting fibular facet, trochlear asymmetry, mediolaterally wide astragalar head) with Aegyptopithecus and Miocene-Recent catarrhines. The evidence from the astragalus complements other independent data from the dentition, humerus and femur of Catopithecus that support this taxon's stem catarrhine status, and we continue to maintain that oligopithecines are stem catarrhines that constitute the sister group of a clade containing propliopithecines and Miocene-Recent catarrhines.     

楼梯草属苞片形态和演化趋势

(Ⅰ)对荨麻科楼梯草属的苞片和小苞片的形态进行了全面研究。(Ⅱ)该属原始群疏伞楼梯草组的雄聚伞花序苞片在每花序为15～90枚,纸质,绿色,狭卵形、狭三角形或条形,长0.5～4 mm,扁平,无任何突起,而与楼梯草族的冷水花属和赤车属的聚伞花序苞片极为相似,因此,上述各种形态可以视为楼梯草属苞片的原始特征,并据此观察到总苞苞片的以下演化趋势:(1)近等大,形状相似,在花序托边缘轮生形成一层→排列为二层,外层2苞片对生,较大,内层苞片较小,形状稍不同;(2)狭卵形,狭三角形或条形→宽卵形或宽三角形,或扁半圆形→由于长度强烈缩小,宽度增大而最终消失;(3)扁平→顶端兜形→船形→船形,顶端突起成细筒;(4)无任何突起↗背面有1龙骨状突起,或有1～6条纵肋或狭翅 ↘顶端具短到长的角状突起→背面顶端之下具角状突起;(5)分生→基部合生→由于长度强烈缩小,宽度强烈增大,总苞苞片合生成一横条形狭片;(6)在数目上,由每花序的7～45枚,一方面增加到50～180枚,另一方面则减少到5枚以下。同时,观察到小苞片形态以下演化趋势:(1)膜质,半透明,白色↗具褐色线纹或呈褐色→呈黑色 ↘薄膜质,透明,无色;(2)扁平→顶端兜形→船形;(3)无任何突起→顶端或在背面顶端之下具角状突起;(4)在数目上,由每花序的7～45枚一方面增加到100或数百枚,甚至达1千到数千枚,另一方面则减少到5枚以下,甚至到0枚。上述演化趋势有助于了解属下各级分类群的演化水平。     

scabrous Modifies Epithelial Cell Adhesion and Extends the Range of Lateral Signalling during Development of the Spaced Bristle Pattern in Drosophila

The role of scabrous (sca) in the evenly spaced bristle pattern of Drosophila is explored. Loss-of-function of sca results in development of an excess of bristles. Segregation of alternately spaced bristle precursors and epidermal cells from a group of equipotential cells relies on lateral inhibition mediated by Notch and Delta (Dl). In this process, presumptive bristle precursors inhibit the neural fate of neighbouring cells, causing them to adopt the epidermal fate. We show that Dl, a membrane-bound ligand for Notch, can inhibit adjacent cells, in direct contact with the precursor, in the absence of Sca. In contrast, inhibition of cells not adjacent to the precursor requires, in addition, Sca, a secreted molecule with a fibrinogen-related domain. Over-expression of Sca in a wild-type background, leads to increased spacing between bristles, suggesting that the range of signalling has been increased. scabrous acts nonautonomously, and we present evidence that, during bristle precursor segregation, Sca is required to maintain the normal adhesive properties of epithelial cells. The possible effects of such changes on the range of signalling are discussed. We also show that the sensory organ precursors extend numerous fine cytoplasmic extensions bearing Dl molecules, and speculate on a possible role for these structures during signalling.     

除草剂精喹禾灵用于硅藻过量产生二十碳五烯酸

硅藻itzschia laevis是EPA很好的替代来源。除了对硅藻进行高密度培养外,EPA的产量还能利用除草剂来提高。本文研究了除草剂精喹禾灵对硅藻的生长和产EPA的影响。DMSO作为除草剂的溶剂,会对硅藻的生长造成抑制,DMSO在培养基中的添加量最好不要超过0.2%。除草剂能对硅藻的细胞形态造成损害,随着除草剂浓度的增加,硅藻的产量减低了,但脂质和EPA的含量提高了。当除草剂浓度为0.1mmol/L时,EPA的含量从3.00%增加到3.58%,提高了19.3%,EPA占总脂肪酸的含量也由25.15%提高到了32.88%。实验表明,除草剂精喹禾灵能促进硅藻EPA的积累,因而在筛选过量产生EPA微藻方面有重要用途。     

质体系统发育基因组解析旋花科系统发育关系

旋花科是一个世界广布的类群,具有丰富的形态特征和重要的经济价值。然而,目前该科主要分支或族间的系统发育关系问题一直未解决。为解析旋花科内系统发育关系,该研究代表性选取旋花科内8个族40个物种,基于质体全基因组数据,使用最大似然法和贝叶斯推论进行系统发育分析。结果表明:(1)旋花科质体基因组均为四分体结构,质体基因组大小为113 273～164 112 bp,蛋白质编码基因数目为66～79个。(2)基于五种DNA矩阵(即WCG、CDS、LSC、IR、SSC)的系统发育分析结果显示,WCG矩阵和CDS矩阵的拓扑结构基本一致,仅少数分支的支持率略有差异; LSC矩阵和WCG矩阵的拓扑结构差异在于菟丝子族、马蹄金族和盐帚花族的系统位置; AU检验和SH检验结果显示,WCG矩阵和SSC矩阵与IR矩阵的拓扑结构有显著冲突。(3)所有系统发育分析结果均显示,菟丝子属和马蹄金族都包括在旋花亚科内,应处理为族等级。(4)基于WCG矩阵和CDS矩阵较好地解决了旋花科8个族之间的系统发育关系,即心被藤族和丁公藤族聚为一支,最先从旋花亚科分化出来,随后是菟丝子族,剩下的5个族分成2个分支。(5)系统发育基因组分析证实,由于鱼黄草族特别是鱼黄草属是一个多系类群,因此需重新修订该族的分类地位和鱼黄草属的划分。     

类胡萝卜素在耐辐射奇球菌辐射抗性中的作用

为研究耐辐射奇球菌(Deinococcus radiodurans)中类胡萝卜素的生化合成基因及其在该细菌抗辐射机制中的生物学作用,通过有机溶剂提取及LC-MS技术分析了D. radiodurans所产类胡萝卜素物质的主要组分,运用PCR及基因同源重组技术,对该菌中类胡萝卜素生化合成途径的八氢番茄红素合成酶(phytoene synthase,crtB)及八氢番茄红素脱氢酶(phytoene desaturase,crtI)基因进行了缺失突变,通过表型观察及HPLC定量分析突变株所产类胡萝卜素的组分变化确证突变株构建成功．野生株及crtB 与crtI基因缺失突变株对电离辐射和H₂O₂的敏感性差异比较分析显示,和野生株相比,两种突变株对不同剂量电离辐射和不同浓度H₂O₂的敏感性更强．crtB及crtI基因功能研究表明,这两个关键性合成基因的缺失,导致突变株不能催化合成类胡萝卜素生化合成途径中的重要中间体——番茄红素及一系列下游产物．通过λ原噬菌体紫外线诱导系统、电子自旋共振 (ESR)及DMPO自旋捕集技术,分别在体内和体外评价了其类胡萝卜素的抗氧化能力．结果表明,两种类胡萝卜素对超氧阴离子(O₂^·)及羟自由基(·OH)均表现出较强的清除作用．上述研究结果为探究D. radiodurans的类胡萝卜素合成基因和生物学功能,及类胡萝卜素在D. radiodurans抗辐射机制中的作用提供了新的直接实验证据．     

降香黄檀叶绿体基因组密码子偏好性分析

为了解降香黄檀叶绿体基因组密码子使用模式,该文利用Codon W 1.4.2和在线软件CUSP对降香黄檀叶绿体基因组中的52条基因编码序列密码子进行中性绘图、ENC-plot和PR2-plot分析。结果表明:降香黄檀叶绿体基因组密码子的3个位置上GC含量依次为GC1(46.01%)GC2(38.98%)GC3(27.80%)。有效密码子数(ENC)范围为37.66～54.43,及ENC值45的有37个; RSCU1的密码子有29个,其中16个以U结尾、12个以A结尾。这些说明其偏好以A和U结尾,且偏性较弱。中性绘图分析显示GC12与GC3的相关系数为0.250,相关性不显著,回归系数为0.394; ENC-plot分析显示ENC比值位于-0.05～0.05区间外的基因有38个; PR2-plot分析说明在碱基的使用频率方面,UA、GC,说明降香黄檀叶绿体基因组密码子偏好性主要受选择的影响; 19个密码子被确定为最优密码子。该研究为降香黄檀叶绿体基因工程、遗传多样性分析等研究提供了科学参考依据。     

Histology and morphometrics of testes of the white-sided dolphin (Lagenorhynchus acutus) in bycatch samples from the northeastern Atlantic

The testes of 31 Atlantic white-sided dolphins, Lagenorhynchus acutus bycaught in the northeastern Atlantic were studied by histological and morphometric techniques. Twenty specimens were classified as mature, nine as immature and two as pubescent. Between immature and mature specimens there were overlappings in body length and body weight, but clear differences in the diameter of seminiferous tubules (<80 and >80 μm) and the proportion of seminiferous tubules to interstitial tissue (ST:INT-ratio). Also relative testes weight differed clearly. The pubescent specimens showed intermediate characteristics. Spermatogenetic activity of mature dolphins ranged from quiescent to different degrees of activity and varied even in animals from the same site and capture date. The fact that we found mature males with quiescent testes suggests a seasonal rather than a continuous spermatogenesis. We assume that sexual activity in L. acutus begins at an age of 7–8 GLGs and that the reproductive season of this species in the northeastern Atlantic starts in February. Further, the ultrastructure of the spermatozoon is similar to that of the related Lagenorhynchus obliquidens.     

Paleosols and paleoenvironments of the middle Miocene,Maboko Formation,Kenya

The middle Miocene (15 Ma) Maboko Formation of Maboko Island and Majiwa Bluffs, southwestern Kenya, has yielded abundant fossils of the earliest known cercopithecoid monkey (Victoriapithecus macinnesi), and of a kenyapithecine hominoid (Kenyapithecus africanus), as well as rare proconsuline (Simiolus leakeyorum, cf. Limnopithecus evansi) and oreopithecine apes (Mabokopithecus clarki, M. pickfordi), and galagids (Komba winamensis). Specific habitat preferences can be interpreted from large collections of primate fossils in different kinds of paleosols (pedotypes). Fossiliferous drab-colored paleosols with iron-manganese nodules (Yom pedotype) are like modern soils of seasonally waterlogged depressions (dambo). Their crumb structure and abundant fine root-traces, as well as scattered large calcareous rhizoconcretions indicate former vegetation of seasonally wet, wooded grassland. Other fossiliferous paleosols are evidence of nyika bushland (Ratong), and early-successional riparian woodland (Dhero). No fossils were found in Mogo paleosols interpreted as saline scrub soils. Very shallow calcic horizons (in Yom, Ratong, and Mogo paleosols) and Na-montmorillonite (in Mogo) are evidence of dry paleoclimate (300-500 mm MAP=mean annual precipitation). This is the driest paleoclimate and most open vegetation yet inferred as a habitat for any Kenyan Miocene apes or monkeys. Victoriapithecus was abundant in dambo wooded grassland (Yom) and riparian woodland (Dhero), a distribution like that of modern vervet monkeys. Kenyapithecus ranged through all these paleosols, but was the most common primate in nyika bushland paleosols (Ratong), comparable to baboons and macaques today. Mabokopithecus was virtually restricted to riparian woodland paleosols (Dhero), and Simiolus had a similar, but marginally wider, distribution. Habitat preferences of Mabokopithecus and Simiolus were like those of modern colobus monkeys and mangabeys. A single specimen of Komba was found in dambo wooded grassland paleosol (Yom), a habitat more like that of the living Senegal bushbaby than of rainforest galagids. A shift to non-forest habitats may explain the terrestrial adaptations of Victoriapithecus, basal to the cercopithecid radiation, and of Kenyapithecus, basal to the hominoid radiation. Both taxa are distinct from earlier Miocene arboreal proconsulines, oreopithecines and galagids.     

细胞周期分子机制的成功探索——2001年诺贝尔生理及医学奖部分工作介绍

细胞周期是指连续分裂的细胞从一次有丝分裂结束到下一次有丝分裂完成所经历的整个序贯过程.在这一过程中,细胞的遗传物质(DNA)经过复制平均分配到两个子细胞中.细胞周期中每一事件都是有规律、精确地发生,并且在时间与空间上受到严格调控.细胞周期中最关键的三类调控因子是：cdc基因、周期蛋白依赖性激酶(CDKs)及细胞周期蛋白(cyclin).这些调控因子的发现对肿瘤学及发育生物学的发展都有重要的理论和实践意义.