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Architecture of the hepatitis C virus E1 glycoprotein transmembrane domain studied by NMR
Authors:Hadas Zazrin  Hadassa ShakedJordan H Chill
Institution:Department of Chemistry, Bar Ilan University, Ramat Gan 52900, Israel
Abstract:Oligomerization of hepatitis C viral envelope proteins E1 and E2 is essential to virus fusion and assembly. Although interactions within the transmembrane (TM) domains of these glycoproteins have proven contributions to the E1/E2 heterodimerization process and consequent infectivity, there is little structural information on this entry mechanism. Here, as a first step towards our long-term goal of understanding the interaction between E1 and E2 TM-domains, we have expressed, purified and characterized E1-TM using structural biomolecular NMR methods. An MBP-fusion expression system yielded sufficient quantities of pure E1-TM, which was solubilized in two membrane-mimicking environments, SDS- and LPPG-micelles, affording samples amenable to NMR studies. Triple resonance assignment experiments and relaxation measurements provided information on the secondary structure and global fold of E1-TM in these environments. In SDS micelles E1-TM adopts a helical conformation, with helical stretches at residues 354–363 and 371–379 separated by a more flexible segment of residues 364–370. In LPPG micelles a helical conformation was observed for residues 354–377 with greater flexibility in the 366–367 dyad, suggesting LPPG provides a more native environment for the peptide. Replacement of key positively charged residue K370 with an alanine did not affect the secondary structure of E1-TM but did change the relative positioning within the micelle of the two helices. These results lay the foundation for structure determination of E1-TM and a molecular understanding of how E1-TM flexibility enhances its interaction with E2-TM during heterodimerization and membrane fusion.
Keywords:CD  circular dichroism  CPMG  Carr&ndash  Purcell&ndash  Meiboom&ndash  Gil (pulse-train)  DHPC  dihexanoylphosphatidylcholine  DPC  dodecyl-phosphocholine  DSS  4  4-dimethyl-4-silapentane-1-sulfonic acid  DTT  1  4-dithio-D-threitol  HCV  hepatitis C virus  HSQC  heteronuclear single-quantum coherence  IPTG  isopropyl β-D-1-thiogalactopyranoside  LPPG  1-palmitoyl-2-hydroxy-sn-glycero-3-phospho-(1'-rac-glycerol)  MBP  maltose-binding protein  MP  membrane-embedded protein  NMR  nuclear magnetic resonance  SDS  sodium dodecylsulphate  TEV  tobacco etch virus (protease)  TM  transmembrane domain
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