Plant species traits are the predominant control on litter decomposition rates within biomes worldwide

Worldwide decomposition rates depend both on climate and the legacy of plant functional traits as litter quality. To quantify the degree to which functional differentiation among species affects their litter decomposition rates, we brought together leaf trait and litter mass loss data for 818 species from 66 decomposition experiments on six continents. We show that: (i) the magnitude of species-driven differences is much larger than previously thought and greater than climate-driven variation; (ii) the decomposability of a species' litter is consistently correlated with that species' ecological strategy within different ecosystems globally, representing a new connection between whole plant carbon strategy and biogeochemical cycling. This connection between plant strategies and decomposability is crucial for both understanding vegetation-soil feedbacks, and for improving forecasts of the global carbon cycle.     

Integrating microbial ecology into ecosystem models: challenges and priorities

Microbial communities can potentially mediate feedbacks between global change and ecosystem function, owing to their sensitivity to environmental change and their control over critical biogeochemical processes. Numerous ecosystem models have been developed to predict global change effects, but most do not consider microbial mechanisms in detail. In this idea paper, we examine the extent to which incorporation of microbial ecology into ecosystem models improves predictions of carbon (C) dynamics under warming, changes in precipitation regime, and anthropogenic nitrogen (N) enrichment. We focus on three cases in which this approach might be especially valuable: temporal dynamics in microbial responses to environmental change, variation in ecological function within microbial communities, and N effects on microbial activity. Four microbially-based models have addressed these scenarios. In each case, predictions of the microbial-based models differ—sometimes substantially—from comparable conventional models. However, validation and parameterization of model performance is challenging. We recommend that the development of microbial-based models must occur in conjunction with the development of theoretical frameworks that predict the temporal responses of microbial communities, the phylogenetic distribution of microbial functions, and the response of microbes to N enrichment.     

Selective gopher disturbance influences plant species effects on nitrogen cycling

Plant species effects on ecosystem processes are mediated by traits such as litter quality and exudation. These same traits also influence the activity and distribution of animals that play key roles in regulating ecosystem dynamics. We planted monocultures of eight plant species commonly found in California grasslands to investigate the relative importance of plant species direct effects on nitrogen cycling, versus their indirect effects mediated by plant interactions with gophers. Plant species differed in their litter C:N ratio, which closely related to species effects on rates of net mineralization and nitrification in undisturbed soil. However, the effect of selective gopher disturbance on N cycling greatly altered these species effects.
Plant species differed in their effects on the type and timing of gopher disturbance. Small feeding holes were formed in late spring in plots containing species with high tissue quality. These feeding holes minimally disturbed the soil and did not alter N cycling rates over the short term. Large gopher mounds were formed in the winter and early spring, primarily in plots containing the grass, Aegilops triuncialis , and to a lesser extent in plots containing Avena barbata . These large mounds significantly disturbed the soil and greatly increased net nitrification rates, but had no consistent effects on net N mineralization. In undisturbed soil, Aegilops had the highest litter C:N ratio and one of the lowest rates of net nitrification. However, gophers preferentially built large mounds in Aegilops plots. Once the effects of gopher burrowing were considered, Aegilops had one of the highest rates of net nitrification, indicating that the indirect effects of plant species on N cycling can be more important than the direct effects alone. This experiment indicates that it is vital to consider interactions between plants and other organisms in order to predict the ecosystem effects of plant communities.     

The temporal development and additivity of plant-soil feedback in perennial grasses

Background

Current knowledge of plant-soil feedback is based largely on single end point studies with soils conditioned by monocultures, but accounting for variability in the ecological impacts of feedback effects may require understanding how feedback develops over time and in multi-species plant communities.

Methods

To examine temporal development and additivity of feedback, two pairs of native and non-native congeneric grasses were grown alone or in mixtures to create six soil conditioning treatments. We measured plant growth and feedback on the soils over 19 months and addressed whether plant biomass was additive or non-additive between soils treated by mixtures and their constituent monocultures.

Results

For native grasses, plant-soil feedback either became progressively more negative through time or switched from neutral to negative. Feedback to non-native grasses was variably neutral to positive. Final biomass of the grasses growing on soils conditioned by mixtures was generally an additive function of growth on soils conditioned by the component monocultures, except native grasses growing in soils conditioned by their own congener mixtures, which were non-additive.

Conclusions

Temporal variation and non-additivity in feedback suggest that extrapolation to communities may be complex. More work is needed to assess the generality of temporal and scaling effects.     

Invasive plants decrease microbial capacity to nitrify and denitrify compared to native California grassland communities

Exotic plant invasions are a major driver of global environmental change that can significantly alter the availability of limiting nutrients such as nitrogen (N). Beginning with European colonization of California, native grasslands were replaced almost entirely by annual exotic grasses, many of which are now so ubiquitous that they are considered part of the regional flora (“naturalized”). A new wave of invasive plants, such as Aegilops triuncialis (Barb goatgrass) and Elymus caput-medusae (Medusahead), continue to spread throughout the state today. To determine whether these new-wave invasive plants alter soil N dynamics, we measured inorganic N pools, nitrification and denitrification potentials, and possible mediating factors such as microbial biomass and soil pH in experimental grasslands comprised of A. triuncialis and E. caput-medusae. We compared these measurements with those from experimental grasslands containing: (1) native annuals and perennials and (2) naturalized exotic annuals. We found that A. triuncialis and E. caput-medusae significantly reduced ion-exchange resin estimates of nitrate (NO₃ ^?) availability as well as nitrification and denitrification potentials compared to native communities. Active microbial biomass was also lower in invaded soils. In contrast, potential measurements of nitrification and denitrification were similar between invaded and naturalized communities. These results suggest that invasion by A. triuncialis and E. caput-medusae may significantly alter the capacity for soil microbial communities to nitrify or denitrify, and by extension alter soil N availability and rates of N transformations during invasion of remnant native-dominated sites.     

Activated H-ras rescues E1A-induced apoptosis and cooperates with E1A to overcome p53-dependent growth arrest.

The adenovirus E1A oncogene products stimulate DNA synthesis and cell proliferation but fail to transform primary baby rat kidney (BRK) cells because of the induction of p53-mediated programmed cell death (apoptosis). Overexpression of dominant mutant p53 (to abrogate wild-type p53 function) or introduction of apoptosis inhibitors, such as adenovirus E1B 19K or Bcl-2 oncoproteins, prevents E1A-induced apoptosis and permits transformation of BRK cells. The ability of activated Harvey-ras (H-ras) to cooperate with E1A to transform BRK cells suggests that H-ras is capable of overcoming the E1A-induced, p53-dependent apoptosis. We demonstrate here that activated H-ras was capable of suppressing apoptosis induced by E1A and wild-type p53. However, unlike Bcl-2 and the E1B 19K proteins, which completely block apoptosis but not p53-dependent growth arrest, H-ras expression permitted DNA synthesis and cell proliferation in the presence of high levels of wild-type p53. The mechanism by which H-ras regulates apoptosis and cell cycle progression is thereby strikingly different from that of the E1B 19K and Bcl-2 proteins. BRK cells transformed with H-ras and the temperature sensitive murine mutant p53(val 135), which lack E1A, underwent growth arrest at the permissive temperature for wild-type p53. p53-dependent growth arrest, however, could be relieved by E1A expression. Thus, H-ras alone was insufficient and cooperation of H-ras and E1A was required to override growth suppression by p53. Our data further suggest that two complementary growth signals from E1A plus H-ras can rescue cell death and thus permit transformation.     

Understanding the long-term effects of species invasions

We describe here the ecological and evolutionary processes that modulate the effects of invasive species over time, and argue that such processes are so widespread and important that ecologists should adopt a long-term perspective on the effects of invasive species. These processes (including evolution, shifts in species composition, accumulation of materials and interactions with abiotic variables) can increase, decrease, or qualitatively change the impacts of an invader through time. However, most studies of the effects of invasive species have been brief and lack a temporal context; 40% of recent studies did not even state the amount of time that had passed since the invasion. Ecologists need theory and empirical data to enable prediction, understanding and management of the acute and chronic effects of species invasions.     

Plant Colonizers Shape Early N-dynamics in Gopher-mounds

Disturbances by fossorial mammals are extremely common in many ecosystems, including the California annual grassland. We compared the impact of juveniles of four common plant colonizers (Aegilops triuncialis, Cerastium glomeratum, Aphanes occidentalis and Lupinus bicolor) on the pools and fluxes of N in mounds created by pocket gophers (Thomomys bottae Mewa). The mechanisms and magnitude of biotic N retention differed among plant species. In mounds colonized by Cerastium, Aphanes and Lupinus, the microbial N pool was significantly larger than the plant N pool, as is typical in California grasslands in the early spring, whereas in mounds colonized by Aegilops, there was a more equal distribution of biotic N between plant and microbial pools. A 1-day ¹⁵N pulse field experiment demonstrated that plant species significantly differed in their effects on the distribution of isotopic N, with the N-fixing Lupinus leaving most (82%) ¹⁵N as inorganic N in soil, whereas more ¹⁵N was immobilized in plants or otherwise removed from the available soil pool in mounds colonized by other species. The impacts of early colonizers on N dynamics suggest that the identity of plant species that initially colonize gopher mounds may have important consequences on the dynamics of the overall grassland community.     

The influence of plant species,fertilization and elevated CO2 on soil aggregate stability

We tested the effects of plant species, fertilization and elevated CO₂ on water-stable soil aggregation. Five annual grassland species and a plant community were grown in outdoor mesocosms for 4 years, with and without NPK fertilization, at ambient or elevated atmospheric CO₂ concentrations. Aggregate stability (resistance of aggregates to slaking) in the top 0.15 m of soil differed among plant species. However, the more diverse plant community did not enhance aggregate stability relative to most monocultures. Species differences in aggregate stability were positively correlated with soil active bacterial biomass, but did not correlate with root biomass or fungal length. Plant species did not affect aggregate stability lower in the soil profile (0.15–0.45 m), where soil biological activity is generally decreased. Elevated CO₂ and NPK fertilization altered many of the factors known to influence aggregation, but did not affect water-stable aggregation at either depth, in any of the plant treatments. These results suggest that global changes will alter soil structure primarily due to shifts in vegetation composition.