Emergence of Cryptosporidium hominis Monkey Genotype II and Novel Subtype Family Ik in the Squirrel Monkey (Saimiri sciureus) in China

A single Cryptosporidium isolate from a squirrel monkey with no clinical symptoms was obtained from a zoo in Ya’an city, China, and was genotyped by PCR amplification and DNA sequencing of the small-subunit ribosomal RNA (SSU rRNA), 70-kDa heat shock protein (HSP70), Cryptosporidium oocyst wall protein, and actin genes. This multilocus genetic characterization determined that the isolate was Cryptosporidium hominis, but carried 2, 10, and 6 nucleotide differences in the SSU rRNA, HSP70, and actin loci, respectively, which is comparable to the variations at these loci between C. hominis and the previously reported monkey genotype (2, 3, and 3 nucleotide differences). Phylogenetic studies, based on neighbor-joining and maximum likelihood methods, showed that the isolate identified in the current study had a distinctly discordant taxonomic status, distinct from known C. hominis and also from the monkey genotype, with respect to the three loci. Restriction fragment length polymorphisms of the SSU rRNA gene obtained from this study were similar to those of known C. hominis but clearly differentiated from the monkey genotype. Further subtyping was performed by sequence analysis of the gene encoding the 60-kDa glycoprotein (gp60). Maximum homology of only 88.3% to C. hominis subtype IdA10G4 was observed for the current isolate, and phylogenetic analysis demonstrated that this particular isolate belonged to a novel C. hominis subtype family, IkA7G4. This study is the first to report C. hominis infection in the squirrel monkey and, based on the observed genetic characteristics, confirms a new C. hominis genotype, monkey genotype II. Thus, these results provide novel insights into genotypic variation in C. hominis.     

Three-Phase Fuel Deposition in a Long-Distance Migrant,the Red Knot (Calidris canutus piersmai), before the Flight to High Arctic Breeding Grounds

Refuelling by migratory birds before take-off on long flights is generally considered a two-phase process, with protein accumulation preceding rapid fat deposition. The first phase expresses the demands for a large digestive system for nutrient storage after shrinkage during previous flights, the second phase the demands for fat stores to fuel the subsequent flight. At the last staging site in northward migration, this process may include expression of selection pressures both en route to and after arrival at the breeding grounds, which remains unascertained. Here we investigated changes in body composition during refuelling of High Arctic breeding red knots (Calidris canutus piersmai) in the northern Yellow Sea, before their flight to the tundra. These red knots followed a three-phase fuel deposition pattern, with protein being stored in the first and last phases, and fat being deposited mainly in the second phase. Thus, they did not shrink nutritional organs before take-off, and even showed hypertrophy of the nutritional organs. These suggest the build up of strategic protein stores before departure to cope with a protein shortage upon arrival on the breeding grounds. Further comparative studies are warranted to examine the degree to which the deposition of stores by migrant birds generally reflects a balance between concurrent and upcoming environmental selection pressures.     

珍稀濒危植物裸果木地理分布与资源现状

该项目于1999～2001年对新疆境内分布的干旱荒漠珍稀植物裸果木(Gymnocarpos przewalskii)进行野外调查,采用线路调查与样访调查相结合的方法,调查了裸果木在新疆境内的地理分布和资源现状,并在此基础上对裸果木濒危原因进行初步探讨.     

道路及道路施工对若尔盖高寒湿地小型兽类及鸟类生境利用的影响

为考察道路和道路施工对若尔盖高寒泥炭湿地野生动物的影响,我们在穿过若尔盖湿地的2条道路两侧,对距道路不同距离的小型兽类和鸟类分布进行了调查,其中小型兽类调查深度距离公路800m,鸟类调查深度距离公路400m。施工中的国道213线路两侧黑唇鼠兔(Ochotonacurzoniae)洞穴高密度区域离道路更远,在道路两侧400m处达到峰值,极显著高于距离道路10m处的密度;而在正常运营中的省道209线两侧,其洞穴密度在200m处达到最高值,与其他距离的洞穴密度没有显著性差异。无论在国道213线还是省道209线,道路对高原鼢鼠(Myospalaxbaileyi)洞穴分布的影响均未达到显著性水平。在正常运营的省道209线两侧,高原鼢鼠土堆密度最高区域为距离道路100m处;而施工的道路两侧高原鼢鼠土堆密度最高区域则出现在距离道路10m处,第二高峰出现在距离道路400m处。雀形目和隼形目鸟类的分布均呈现距离道路越远密度越高的趋势,但是只有距离道路400m处雀形目鸟类的密度显著高于50m与200m处;距离道路不同距离的样线中隼形目鸟类密度和物种丰富度没有显著性差异。由此可以看出,施工中的道路对黑唇鼠兔的影响区域比正常运营的道路更宽,其公路效应域达到400m,400m的调查深度对鸟类尤其是隼形目鸟类来说可能还略有不足。但是,根据此深度的调查可以确定施工中的国道213线雀形目和隼形目鸟类的公路效应域宽度大于400m。     

甘青铁线莲花中黄酮类化合物提取工艺探讨

对甘青铁线莲花中黄酮类物质的提取工艺进行研究。结果表明：在温度为80℃时,影响黄酮类化合物提取的因素顺序为提取时间〉乙醇浓度〉料液比。甘青铁线莲花中黄酮类物质的最佳提取条件为：当温度为80℃时,乙醇浓度80％、料液比1：30（g：mL）、回流时间为1．5h时提取最佳。在此条件下总黄酮的得率为1．86％。     

Characterization of the N-methyltransferase CalM involved in calcimycin biosynthesis by Streptomyces chartreusis NRRL 3882

Calcimycin is a rare divalent cation specific ionophore antibiotic that has many biochemical and pharmaceutical applications. We have recently cloned and sequenced the Streptomyces chartreusis calcimycin biosynthesis gene cluster as well as identified the genes required for the synthesis of the polyketide backbone of calcimycin. Additional modifying or decorating enzymes are required to convert the polyketide backbone into the biologically active calcimycin. Using targeted mutagenesis of Streptomyces we were able to show that calM from the calcimycin biosynthesis gene cluster is required for calcimycin production. Inactivating calM by PCR targeting, caused high level accumulation of N-demethyl calcimycin. CalM in the presence of S-adenosyl-L-methionine converted N-demethyl calcimycin to calcimycin in vitro. The enzyme was determined to have a kinetic parameter of K_m 276 μM, k_cat 1.26 min⁻¹ and k_cat/K_m 76.2 M⁻¹ s⁻¹. These results proved that CalM is a N-methyltransferase that is required for calcimycin biosynthesis, and they set the stage for generating much desired novel calcimycin derivatives by rational genetic and chemical engineering.     

The C161T polymorphism in the peroxisome proliferator-activated receptor gamma gene (PPARγ) is associated with risk of coronary artery disease: a meta-analysis

The researches attempting to associate the PPARγ C161T polymorphism with coronary artery disease (CAD) yielded complicated and contradictory results. We aimed for more precise estimate of the relationship and conducted a comprehensive meta-analysis. Publications written in English or Chinese were screened in MEDLINE, Embase, CNKI, Wanfang and CBM. Data on 11 studies including 3,020 cases and 2,853 controls were extracted. A random-effects model was available to synthesize the inconsistent outcomes of the individual studies, while addressing between-study heterogeneity and publication bias. The PPARγ C161T polymorphism followed Hard-Weinberg Equilibrium for all studies (P > 0.05).Overall, there was no evidence for a significant association under all genetic models but with distinct heterogeneity (T vs. C: P = 0.29, OR = 0.91, 95 %CI 0.77–1.08, P _{heterogeneity} = 0.004, I ² = 61.2 %). However, in the subgroup analysis by ethnicity, the T allele carriers showed a prominent 26 % risk reduction of CAD among Chinese (dominant genetic model: P = 0.03, 95 %CI 0.57–0.97, P _{heterogeneity} = 0.03, I ² = 56.1 %). After dividing into population source, the significance of CAD risk reduction was strengthened in hospital-based studies (allele comparison: P = 0.04, OR = 0.82, 95 %CI 0.67–1.00, P _{heterogeneity} = 0.04, I ² = 52.5 %; dominant model: P = 0.01, OR = 0.73, 95 %CI 0.57–0.92, P _{heterogeneity} = 0.05, I ² = 50.8 %). There was no obvious publication bias verified in the method of funnel plot and Egger’s linear regression test (t = ?0.11, P = 0.913). Taken together, our results revealed the PPARγ C161T polymorphism might play a moderate protective effect on developing CAD among Chinese, but not among Caucasians.     

The archaeobotanical significance of immature millet grains: an experimental case study of Chinese millet crop processing

We present evidence from ethnography and experimental processing of foxtail millet (Setaria italica (L.) P. Beauv.) in China that spikelets containing incompletely filled (or immature) grains constitute a significant portion of typical millet harvests and are removed along with other by-products after threshing and winnowing. This study provides a baseline for the identification of immature foxtail grains in archaeobotanical assemblages. Immature millet grains are a frequent component of archaeobotanical assemblages in Neolithic and Bronze Age China, and criteria for their recognition are presented based on our modern experimental result and illustrated with archaeobotanical examples from Shandong and Henan. It is seed morphology rather than size that plays a determinative role in the identification of foxtail millet. It is suggested that those grains with a narrow egg-shaped embryo, which is about 5/6 of the whole grain, and having a round shape can be classed as foxtail millet even though they are small, flat and squashed. While different grades of immaturity in millet grains might be defined, the interpretative potential of these appears to be negligible as all immature grains are concentrated in winnowing waste. This study confirms the suggestion that the ratio of immature to mature millet grains can be employed in archaeobotany in considering whether or not early stage crop processing (threshing and winnowing) contributed to the formation of particular archaeological millet assemblages.     

岩溶区不同植被下土壤水溶解无机碳含量及其稳定碳同位素组成特征

自2010年7月至2011年7月对重庆青木关岩溶区典型植被下的土壤水进行了月动态取样,分析了土壤水溶解无机碳含量(DIC浓度)及其稳定碳同位素组成(δ13CDIC值)的时空变化特征,以揭示岩溶土壤系统碳酸盐岩溶蚀作用及其碳汇效应。研究结果表明:草地和针叶林地土壤水的DIC浓度和δ13CDIC值相对较低,分别为59.12 mg/L和-17.22‰,31.47 mg/L和-16.37‰;而旱地、灌丛地、退耕还林地土壤水具有较高的DIC浓度和δ13CDIC值,分别达153.88 mg/L和-12.2‰,221.82 mg/L和-11.9‰,97.30 mg/L和-11.23‰,其中灌丛和退耕还林地的δ13CDIC值与DIC浓度呈正比,且雨季较旱季偏高约4‰—5‰。根据δ13CDIC值,结合各植被类型下土壤水DIC浓度与其相应的土壤碳酸盐含量呈正相关,判断旱地、灌丛地、退耕还林地等岩溶土壤水中的DIC主要来自土壤中碳酸盐岩矿物的碳酸溶蚀,即岩溶土壤中存在着碳酸盐岩碳酸溶蚀作用,从而在一定程度上减少了土壤系统向大气排放的CO2量。