NON-PHOTOSYNTHETIC FIXATION OF CARBON DIOXIDE AND POSSIBLE BIOLOGICAL ROLES IN HIGHER PLANTS

1. Non-photosynthetic fixation of CO₂/HCO₃^- occurs both under light and dark conditions and involve the addition of carbon to substrates which in higher plants are derived originally from carbon reduced to carbohydrates during photosynthesis. Despite the endergonic nature of these carboxylations, the advantages offered seem to be sufficient to outweigh the disadvantages of energy loss. 2. Non-photosynthetic carbon incorporation into metabolism is dealt mainly in relation to PEP carboxylase, acetyl-CoA carboxylase, carbamoyl phosphate synthetase and phosphoribosylaminoimidazole carboxylase while other carboxylases await further characterization or discovery. The extent to which a carboxylase participates depends upon the need for products of its activity in metabolism. 3. Non-photosynthetic carbon fixation is intricately involved in several pathways of metabolism throughout the ontogeny of plants. The roles in relation to leaf carbon metabolism, respiratory metabolism, nitrogen metabolism, lipid and isoprenoid biosynthesis, purine and pyrimidine metabolism and metabolism associated with the action of growth regulators have been described. The fixation reactions appear to be largely concerned with the production of intermediary metabolites, circumvention of energy barriers in metabolism and regulation of plant metabolism. In addition, the activity of PEP carboxylase is involved in ionic balance and pH-stat. 4. Malate derived by way of PEP carboxylase and NAD-malate dehydrogenase acts as an effective osmoticum and a counter-ion for K⁺ accumulation in actively growing plant cells. In addition, malate may enter the TCA cycle or can be decarboxylated by cytoplasmic NADP-malic enzyme converting NADH to NADPH. Wherever it has been sought in different plant tissues, some evidence for PEP carboxylase and metabolism of malate has always been found. 5. Almost every plant process spanning from seed development and germination to flowering and fruit-set requires the essential participation of non-photosynthetic carbon fixation in regulating certain metabolic and cellular functions but it does not contribute in a major way to the carbon nutrition of plants. It is largely the tissue type that appears to determine which of the roles is predominant at any one time.     

Sixteen new simple sequence repeat markers from Brassica juncea expressed sequences and their cross‐species amplification

The availability of expressed sequence data derived from gene discovery programs enables mining for simple sequence repeats (SSR), providing useful genetic markers for crop improvement. These markers are inexpensive, require minimal labour to produce and can frequently be associated with functionally annotated genes. This study presents the development and characterization of 16 expressed sequence tags (EST)‐SSR markers from Brassica juncea and their cross‐amplification across Brassica species. Sixteen primer pairs were assessed for polymorphism in all genomes of the diploid and amphidiploid Brassica species. The markers show reliable amplification, considerable polymorphism and high transferability across species, demonstrating the utility of EST‐SSRs for genetic analysis of brassicas.     

Identification and characterization of simple sequence repeat markers from Brassica napus expressed sequences

The availability of expressed sequence data derived from gene discovery programs enables mining for simple sequence repeats (SSR), providing useful genetic markers for crop improvement. These markers are inexpensive, require minimal labour to produce and can frequently be associated with functionally annotated genes. This study presents the development and characterization of 24 expressed sequence tags (EST)‐SSR markers from Brassica napus and their cross‐amplification across Brassica species. The markers show reliable amplification, genome specificity and considerable polymorphism, demonstrating the utility of EST‐SSRs for genetic analysis of wild Brassica populations and commercial Brassica germplasm.     

Influence of colony associated factors on nest selection in an Indian queenless ant

1. Organisms face the difficult task of selecting an optimal new nest from the available options during relocation. Studies on honeybees and ants in their natural habitat indicate that scouts encounter multiple options that vary in their physical and biotic characteristics. 2. Architectural features, location, odour, and the presence of nest mates impact their choice of nest site selection. In order to examine the influence of diverse parameters on final nest site selection we conducted choice experiments on ants in the context of relocation. 3. After controlling for any influence by physical characteristics, we found that the presence of brood, adults, and colony odour acted as attractants with more colonies relocating into these new nests than expected by chance alone. In contrast, the presence of a reproductive female, or familiarity of location had no influence on the choice. New nests containing dead ants evoked cleaning responses from scouts, which may interfere with relocation into these nests. 4. Even although colonies consist of hundreds of adults and brood, colony integrity was maintained in 98.7% of colonies. Furthermore, we found that none of the eight studied colonies relocated when faced with minor flooding in their natural habitat, indicating that the cost of relocation is non‐trivial and that this species is capable of minor damage repairs. 5. These observations highlight the complexity of relocation in general, allow the characterisation of desirable nest attributes in this species, and highlight the need for similar exploration in other social insects.     

RGK regulation of voltage-gated calcium channels

Voltage-gated calcium channels(VGCCs) play critical roles in cardiac and skeletal muscle contractions,hormone and neurotransmitter release,as well as slower processes such as cell proliferation,differentiation,migration and death.Mutations in VGCCs lead to numerous cardiac,muscle and neurological disease,and their physiological function is tightly regulated by kinases,phosphatases,G-proteins,calmodulin and many other proteins.Fifteen years ago,RGK proteins were discovered as the most potent endogenous regulators of VGCCs.They are a family of monomeric GTPases(Rad,Rem,Rem2,and Gem/Kir),in the superfamily of Ras GTPases,and they have two known functions: regulation of cytoskeletal dynamics including dendritic arborization and inhibition of VGCCs.Here we review the mechanisms and molecular determinants of RGK-mediated VGCC inhibition,the physiological impact of this inhibition,and recent evidence linking the two known RGK functions.     

Maternal <Emphasis Type="Italic">MTHFR</Emphasis> polymorphism (677 C–T) and risk of Down’s syndrome child: meta-analysis

Methylenetetrahydrofolate reductase (MTHFR) is the most important gene that participates in folate metabolism. Presence of valine instead of alanine at position 677 and elevated levels of homocystein causes DNA hypomethylation which in turn favours nondisjunction. In this study, we conducted a meta-analysis to establish link between maternal single-nucleotide polymorphism (SNP) and birth of Down’s syndrome (DS) child. A total of 37 case–control studies were selected for analysis including our own, in which we investigated 110 cases and 111 control mothers. Overall, the result of meta-analysis showed significant risk of DS affected by the presence of maternal SNP (MTHFR 677 C–T OR = 0.816, 95% CI = 0.741–0.900, P<0.0001). Heterogeneity of high magnitude was observed among the studies. The chi-square value suggested a highly significant association between homozygous mutant TT genotype and birth of DS child (χ²=23.63, P=0.000). Genetic models suggested that ‘T’ allele possesses high risk for DS whether present in dominant (OR = 1.23, 95% CI = 1.13–1.34); codominant (OR = 1.17, 95% CI = 1.10–1.25) or recessive (OR = 1.21, 95% CI = 1.05–1.38) form. The analysis from all 37 studies combined together suggested that MTHFR 677 C–T is a major risk factor for DS birth.     

Mapping of stripe rust resistance gene in an <Emphasis Type="Italic">Aegilops caudata</Emphasis> introgression line in wheat and its genetic association with leaf rust resistance

A pair of stripe rust and leaf rust resistance genes was introgressed from Aegilops caudata, a nonprogenitor diploid species with the CC genome, to cultivated wheat. Inheritance and genetic mapping of stripe rust resistance gene in backcross-recombinant inbred line (BC-RIL) population derived from the cross of a wheat–Ae. caudata introgression line (IL) T291-2(pau16060) with wheat cv. PBW343 is reported here. Segregation of BC-RILs for stripe rust resistance depicted a single major gene conditioning adult plant resistance (APR) with stripe rust reaction varying from TR-20MS in resistant RILs signifying the presence of some minor genes as well. Genetic association with leaf rust resistance revealed that two genes are located at a recombination distance of 13%. IL T291-2 had earlier been reported to carry introgressions on wheat chromosomes 2D, 3D, 4D, 5D, 6D and 7D. Genetic mapping indicated the introgression of stripe rust resistance gene on wheat chromosome 5DS in the region carrying leaf rust resistance gene LrAc, but as an independent introgression. Simple sequence repeat (SSR) and sequence-tagged site (STS) markers designed from the survey sequence data of 5DS enriched the target region harbouring stripe and leaf rust resistance genes. Stripe rust resistance locus, temporarily designated as YrAc, mapped at the distal most end of 5DS linked with a group of four colocated SSRs and two resistance gene analogue (RGA)-STS markers at a distance of 5.3 cM. LrAc mapped at a distance of 9.0 cM from the YrAc and at 2.8 cM from RGA-STS marker Ta5DS_2737450, YrAc and LrAc appear to be the candidate genes for marker-assisted enrichment of the wheat gene pool for rust resistance.     

The effect of sodium fluoride on cereal seed germination and seedling growth

Abstract. Fluoride has been shown to inhibit germination and seedling establishment in barley cv. Natasha, wheat cv. Axona and rice cv. Ishikari. The concentrations of fluoride were selected so as to give a satisfactory dose-response relationship and also to relate to levels of fluoride present under natural conditions. Concentrations used were zero, 0.5, 1.0, 10 and 40 mol m⁻³ sodium fluoride. In germination studies, barley was found to be least tolerant and rice most tolerant of fluoride. The inhibition was found to be a response to fluoride itself and the observed effects were not due to pH, sodium or an unspecific effect of halide ion. Phosphate, applied at two concentration levels, was unable to overcome the inhibition. Fluoride was also shown to inhibit seedling growth. The inhibitory effects of fluoride may be accounted for by a wide range of metabolic effects including inhibition of gibberellic acid–triggered alpha amylase activity during germination, and later on to inhibition of chlorophyll synthesis in the developing leaves.     

Comparative phytotoxicity of four monoterpenes against Cassia occidentalis

The effect of four monoterpenes ‐ citronellol, citronellal, cineole and linalool ‐ on the germination, growth and physiology of Cassia occidentalis was investigated. All four monoterpenes reduced germination of C. occidentalis seeds but to varying extents. Citronellal and linalool completely inhibited germination beyond the concentrations of 55 and 110 μM, respectively, whereas in response to treatment of citronellol no germination was observed beyond 330 μM. Further, the growth of seedlings, measured in terms of seedling length and biomass, was also adversely affected. A reduction in chlorophyll content of the cotyledonary leaves of C. occidentalis was also noticed, indicating an adverse effect on photosynthesis. Likewise, respiratory ability of growing seeds was also impaired in response to all four monoterpenes, clearly indicating that monoterpenes affect energy metabolism. On the basis of overall phytotoxicity, potency of monoterpenes was in the order of citronellal > linalool > citronellol > cineole. The results from this study suggest that both citronellal and linalool possess strong phytotoxic potential and can thus serve as lead molecules for the synthesis of bioherbicides.