Identification and characterization of simple sequence repeat markers from Brassica napus expressed sequences

The availability of expressed sequence data derived from gene discovery programs enables mining for simple sequence repeats (SSR), providing useful genetic markers for crop improvement. These markers are inexpensive, require minimal labour to produce and can frequently be associated with functionally annotated genes. This study presents the development and characterization of 24 expressed sequence tags (EST)‐SSR markers from Brassica napus and their cross‐amplification across Brassica species. The markers show reliable amplification, genome specificity and considerable polymorphism, demonstrating the utility of EST‐SSRs for genetic analysis of wild Brassica populations and commercial Brassica germplasm.     

The significance of the Presence of Stomata on Seedling Roots

Slightly squashed and transversely sectioned sprouts (seedlingroot + hypocotyl to cotyledons) of Pisum arvense, Ornithopussativus and Helianthus annuus were examined. The presence ofstomata is described on seedling roots, including the root hairzone, in Pisum and Ornithopus and in the root hair zone of thehypocotyl of Helianthus. The stomata found in the root hairzones are almost always open, usually without chloroplasts andare not sensitive to the action of abscisic acid (ABA). TheABA sensitivity of the stomata appears first above the roothair zone and increases gradually towards the cotyledons. Thepossible role of stomata in the root hair zone is discussed. Seedling root, hypocotyl, root hair zone, stomata     

Characterization of simple sequence repeat markers derived in silico from Brassica rapa bacterial artificial chromosome sequences and their application in Brassica napus

A collaborative Brassica rapa genome sequencing project is currently in progress to aid the identification of agronomically important traits in Brassica species. As an initial stage, the ends of over 110 000 bacterial artificial chromosome clones were sequenced and mined for simple sequence repeats (SSRs). We present the characterization of 40 of these SSRs and their application in Brassica napus. The markers were screened against six Brassica species and Arabidopsis, and demonstrated reliable amplification, genome specificity, cross‐amplification and significant polymorphism. These SSRs will be useful for genetic analysis of Brassica germplasm.