Lysine-rich proteins in high-lysine Hordeum vulgare grain

The salt-soluble proteins in barley grain selected for high-lysine content (Hiproly, CI 7115 and the mutants 29 and 86) and of a control (Carlsberg II) with normal lysine content, contain identical major proteins as determined by MW and electrophoretic mobility. The concentration of a protein group with a high lysine content varies significantly among the barleys examined. One protein, present in large amounts in Hiproly, is assumed to be partially responsible for the high-lysine character of Hiproly, CI 7115 and the mutants 29 and 86.     

Heat shock temperature acclimation of normal secretory protein synthesis in barley aleurone cells

Exposure of barley (Hordeum vulgare L. cv. Himalaya) aleurone layers to 40°C for a period of 3 h results in the selective suppression of the synthesis and secretion of hydrolytic enzymes; other normal cellular protein synthesis continues during heat shock. This suppression is correlated with secretory protein mRNA destabilization and the dissociation of stacked ER lamellae during heat shock (Belanger et al. 1986, Proceedings of the National Academy of Sciences USA 83, pp. 1354–1358). In this report we examined the effect of exposure to extended periods of heat shock. If exposure to 40°C was continued for a period of 18 h, the synthesis of α-amylase, the predominant secreted hydrolase, resumed. This was accompanied by increased α-amylase mRNA levels and the reformation of ER lamellae. Though initial exposure (3 h) to 40°C reduced protein secretion to ～10% of that observed in aleurone cells maintained at 25°C, exposure for prolonged periods (16–20 h) permitted the resumption of protein secretion to ～66% of non-heat-shocked control levels. The resumption of normal secretory protein synthesis during prolonged exposure to 40°C was correlated with an increase in the incorporation of [¹⁴C]glycerol into phosphatidylcholine and an increase in the ratio of saturated to unsaturated fatty acids in lipids isolated from ER membrane preparations. Increased fatty acid saturation has been demonstrated to enhance thermostability in biological membranes, and such changes in membrane composition may be important to the recovery of secretory protein synthesis at the ER.     

有色大麦种质芽期耐盐性鉴定

以44份有色大麦种质为试材,通过测定发芽势、发芽率、发芽指数、萌发活力指数结合两个颜色指标YU(颜色亮度和浓度)进行芽期的耐盐性鉴定,并运用相关性分析、主成分分析、聚类分析等方法对有色大麦材料进行多指标耐盐性综合评价。结果表明,发芽率和发芽指数对盐胁迫响应最为敏感,芽长和根长对盐胁迫响应较为迟钝;粒色亮度与耐盐性综合评价F值呈显著负相关;粒色浓度与耐盐性综合评价F值呈显著正相关;综合指标F值相关分析表明,颜色越深,耐盐性越强;用综合指标F值,可将44份有色大麦分为4类,其中强耐盐材料包括XZDM-1401、XZDM-1404、XZDM-1543、XZDM-1546等4份,中等耐盐性包括XZDM-926、XZDM-957、XZDM-972等16份,弱耐盐性包括XZDM-815、XZDM-1606、XZDM-1030等12份,敏盐性包括XZDM-973、XZDM-1042、XZDM-1318等12份。     

Exome sequences and multi‐environment field trials elucidate the genetic basis of adaptation in barley

Broadening the genetic base of crops is crucial for developing varieties to respond to global agricultural challenges such as climate change. Here, we analysed a diverse panel of 371 domesticated lines of the model crop barley to explore the genetics of crop adaptation. We first collected exome sequence data and phenotypes of key life history traits from contrasting multi‐environment common garden trials. Then we applied refined statistical methods, including some based on exomic haplotype states, for genotype‐by‐environment (G×E) modelling. Sub‐populations defined from exomic profiles were coincident with barley's biology, geography and history, and explained a high proportion of trial phenotypic variance. Clear G×E interactions indicated adaptation profiles that varied for landraces and cultivars. Exploration of circadian clock‐related genes, associated with the environmentally adaptive days to heading trait (crucial for the crop's spread from the Fertile Crescent), illustrated complexities in G×E effect directions, and the importance of latitudinally based genic context in the expression of large‐effect alleles. Our analysis supports a gene‐level scientific understanding of crop adaption and leads to practical opportunities for crop improvement, allowing the prioritisation of genomic regions and particular sets of lines for breeding efforts seeking to cope with climate change and other stresses.     

Genetic association with high‐resolution climate data reveals selection footprints in the genomes of barley landraces across the Iberian Peninsula

Landraces are local populations of crop plants adapted to a particular environment. Extant landraces are surviving genetic archives, keeping signatures of the selection processes experienced by them until settling in their current niches. This study intends to establish relationships between genetic diversity of barley (Hordeum vulgare L.) landraces collected in Spain and the climate of their collection sites. A high‐resolution climatic data set (5 × 5 km spatial, 1‐day temporal grid) was computed from over 2,000 temperature and 7,000 precipitation stations across peninsular Spain. This data set, spanning the period 1981–2010, was used to derive agroclimatic variables meaningful for cereal production at the collection sites of 135 barley landraces. Variables summarize temperature, precipitation, evapotranspiration, potential vernalization and frost probability at different times of the year and time scales (season and month). SNP genotyping of the landraces was carried out combining Illumina Infinium assays and genotyping‐by‐sequencing, yielding 9,920 biallelic markers (7,479 with position on the barley reference genome). The association of these SNPs with agroclimatic variables was analysed at two levels of genetic diversity, with and without taking into account population structure. The whole data sets and analysis pipelines are documented and available at https://eead-csic-compbio.github.io/barley-agroclimatic-association . We found differential adaptation of the germplasm groups identified to be dominated by reactions to cold temperature and late‐season frost occurrence, as well as to water availability. Several significant associations pointing at specific adaptations to agroclimatic features related to temperature and water availability were observed, and candidate genes underlying some of the main regions are proposed.     

Effects of Rate and Source Organo-Mineral Material on Forage Yield and Nutritive Value of Barley-Pea Mixed under Arid Conditions

Cereal-legume intercropping plays a vital role in the subsistence food production system that prevails in the arid regions. It not only provides profitable crop productivity for agricultural communities but also plays an important role in improving soil fertility. Therefore, the present research was conducted to assess the effect of the organic and mineral fertilizers on the forage yield and nutritional value in barley-pea intercropping system. The results revealed that the quality of forage grass is significantly influenced by both organic and inorganic fertilizer. Thus, organic fertilizer application has significantly influenced the dry matter (DM), crude ash (CA), crude protein (CP), neutral detergent fiber (NDF), and acid detergent fiber (ADF). Among the treatments, organic fertilizer added at rate of 35 m⁻³ ha⁻¹ produced the maximum fresh and dry matter in barley and peas. In addition, the same level of organic fertilizer also improved silage composition by significantly increasing the protein and fiber content and showed highest the values. Based on overall results, it is concluded that organic fertilizer treatment (35 m⁻³ ha⁻¹) has the potential as an effective strategy to improve the productivity and nutritional quality of the barley-pea intercropping system in arid areas. The results revealed that organic fertilizer can be utilized in sustainable agricultural as a source of nutrients for numerous various crops under arid conditions.     

丛枝菌根真菌对茄子黄萎病的防治效果和茄子植株生长的影响

研究了接种丛枝菌根真菌(AMF)对茄子生长和对黄萎病的影响,并且探讨了AMF诱导植物抗病性的生理生化变化。结果表明:接种AMF能促进茄子的生长,明显降低茄子黄萎病的发病率和发病指数;与只接黄萎菌处理比较,在先接种AMF然后接种黄萎病原菌的情况下,可以降低茄子叶内脯氨酸含量和相对电导率,提高根系活力,提高过氧化物酶(POD)、多酚氧化酶(PPO)和苯丙氨酸解氨酶(PAL)的活性。试验显示,AMF对茄子黄萎病具有一定的生防效果。这种抗性可能来源于AMF提高了茄子营养水平,激活了植物抗病机制。     

青稞HbSnRK2.4的克隆及其序列特征与表达特性分析

干旱胁迫是制约农作物生产的重要限制因素之一,研究并增强作物的抗旱性具有重要意义。Sn RK2(Sucrose nonfermenting 1-related protein kinase 2)基因编码一类蔗糖非酵解型蛋白激酶,该酶在ABA信号转录途径和抗渗透胁迫中起着重要作用。以青稞(Hordeum vulgare subsp.vulgare)抗旱品种喜马拉雅10号为材料,利用RT-PCR技术克隆获得了Sn RK2基因全长c DNA序列,命名为Hb Sn RK2.4(登录号:KJ699389)。生物信息学分析表明,该基因全长1 310 bp,编码362个氨基酸序列,蛋白分子量为41.94 k D,等电点(p I)为5.96。Prosite Scan分析结果表明,Hb Sn RK2.4含有多个干旱胁迫响应蛋白的作用位点,如酪蛋白激酶Ⅱ磷酸化位点、酪氨酸激酶磷酸化位点、蛋白激酶C磷酸化位点及N-豆蔻酰化位点等。利用实时定量PCR方法研究了Hb Sn RK2.4在干旱胁迫条件下及复水后不同时间点的表达情况,发现Hb Sn RK2.4在土壤绝对含水量为33.4%时表达量最高,随着土壤绝对含水量的下降而下调表达;当达到作物正常生长所需的土壤绝对含水量时又开始上调表达;进行干旱胁迫后(15.5%)基因表达量下降;复水后8 h时恢复正常表达水平。