Postglacial ecotype formation under outcrossing and self‐fertilization in Arabidopsis lyrata

The formation of ecotypes has been invoked as an important driver of postglacial biodiversity, because many species colonized heterogeneous habitats and experienced divergent selection. Ecotype formation has been predominantly studied in outcrossing taxa, while far less attention has been paid to the implications of mating system shifts. Here, we addressed whether substrate‐related ecotypes exist in selfing and outcrossing populations of Arabidopsis lyrata subsp. lyrata and whether the genomic footprint differs between mating systems. The North American subspecies colonized both rocky and sandy habitats during postglacial range expansion and shifted the mating system from predominantly outcrossing to predominantly selfing in a number of regions. We performed an association study on pooled whole‐genome sequence data of 20 selfing or outcrossing populations, which suggested genes involved in adaptation to substrate. Motivated by enriched gene ontology terms, we compared root growth between plants from the two substrates in a common environment and found that plants originating from sand grew roots faster and produced more side roots, independent of mating system. Furthermore, single nucleotide polymorphisms associated with substrate‐related ecotypes were more clustered among selfing populations. Our study provides evidence for substrate‐related ecotypes in A. lyrata and divergence in the genomic footprint between mating systems. The latter is the likely result of selfing populations having experienced divergent selection on larger genomic regions due to higher genome‐wide linkage disequilibrium.     

Coordinated Network Changes across the Catalytic Cycle of Alpha Tryptophan Synthase

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湖北旋覆花化学成分及抗结核活性研究

为进一步研究湖北旋覆花花序中的化学成分及抗结核活性。实验采用硅胶柱色谱、反相硅胶柱色谱以及制备型高相液相等方法进行了成分系统研究,肉汤二倍稀释法测定化合物的体外抗结核分支杆菌活性。从其花序中分离得到10个化合物。应用波谱学方法分别鉴定为:7,8-epoxy-9-(isobutyryloxy)thymolisobutyrate(1)、10-(2-methylbutyloxy)-8,9-epoxythymolisobutyrate(2)、stigmasterol(3)、ayapin(4)、ergolide(5)、5,10-epi-2,3-dihydroaromatin(6)、xanthalongin(7)、bigelovin(8)、carpesiolin(9)、aromaticin(10)。化合物1、2、5、6、8～10均为首次从该植物中分离得到。其中化合物5～10均为倍半萜类化合物。化合物5、6、8～10对结核分枝杆菌细胞株具有较好的抑制活性,最小抑制浓度MIC值分别为10.00、30.00、5.00、3.15、3.15μM,9和10的活性效果显著。     

Monarch butterfly host plant (milkweed Asclepias spp.) abundance varies by habitat type across 98 prairies

The decline in migratory monarch butterflies (Danaus plexippus) over the past 20 years has been attributed to several drivers, including loss of their host plants (milkweeds Asclepias spp.). This has sparked widespread interest in milkweed ecology and restoration. We developed a model on environmental and habitat‐type variables to predict milkweed abundance by sampling 93 prairie plantings (47 conservation plantings and 46 roadsides) and 5 unplowed prairie remnants throughout the state of Iowa, United States. Milkweeds were censused in 10–25 random locations within each site, and data on plant diversity, age of planting, soil characteristics, and management were tested as predictors of abundance. Milkweed densities of all species combined were highest in remnant prairies (8,705 stems/ha), intermediate in roadside plantings (1,274 stems/ha), and lowest in conservation plantings (212 stems/ha). Most milkweeds were common milkweeds Asclepias syriaca, which were more abundant in roadside than conservation plantings. Remnants contained the most milkweed species. Total milkweed and common milkweed abundance were both predicted by higher soil pH, a more linear site shape, and lower soil bulk density across restorations. Our results indicate that common milkweed is maintained by disturbance, and establishes readily in rural roadside habitat. Remnants are important as reservoirs for multiple milkweed species and should be protected.     

Bare soil cover and arbuscular mycorrhizal community in the first montane forest restoration in Central Argentina

Soil erosion affects extensive areas worldwide and must be urgently reduced promoting plant cover and beneficial microorganisms associated with plants, including arbuscular mycorrhizal fungi (AMF). In mountain environments, plant cover is difficult to enhance due to harsh conditions during the dry season and steep slopes. Our objective was to evaluate the percentage of the soil surface covered by plants and the AMF community associated with trees 12.5 years after planting during forest restoration efforts in microsites at different levels of soil degradation. The study was performed in the first montane forest restoration initiative of Central Argentina, where one of the trials consisted of planting Polylepis australis saplings at microsites with different levels of soil degradation: high, intermediate, and low. After 12.5 years, percentage of bare soil cover was significantly reduced by 36 and 37% in the high and intermediate degradation microsites, respectively. Low degradation microsites were initially very low in bare soil and did not significantly change. Mycorrhizal colonization, hyphae, vesicles, arbuscules, AMF diversity, and community structure were similar among microsite types. Percentage of hyphal entry points was higher at microsites with low degradation, number of spores was higher in high and intermediate degradation, and species richness was higher in high degradation. Acaulospora and Glomus were the most abundant genera in all microsites. We conclude that even in the most degraded microsites around 2.8% of the bare soil is covered by vegetation each year and that the arbuscular mycorrhizal community is highly tolerant and adapted to soils with different disturbance types.     

Wood chip soil amendments in restored wetlands affect plant growth by reducing compaction and increasing dissolved phenolics

Adding chipped wood to soil ameliorates compaction, allowing faster plant growth that is critical to successful wetland restorations. Following the filling and planting of an erosion gully in Halstead Meadow, Sequoia National Park, the tallest leaf height and maximum clone width of transplanted Scirpus microcarpus seedlings were negatively correlated with soil compaction. Plant height decreased by 9.8 cm and width decreased by 11.9 cm per MPa of soil compaction (range of 0.74–4.50 MPa). We experimentally amended mineral soil in a test trench and found that every 0.10 cm³/cm³ addition of wood chips (range of 0.00–0.75 cm³/cm³) reduced compaction by 0.174 MPa. Had the Halstead Meadow gully fill contained an equivalent volume of wood chips to the reference area soil organic matter content (0.64 cm³/cm³), we predict compaction would have been reduced by 1.11 MPa, increasing individual transplant width spread by 36%, approximately doubling the vegetated area after two growing seasons. In a greenhouse phytometer experiment, conifer bark leachate (phenolics 211 mg/L) significantly reduced plant growth and, in the presence of added nutrients, increased the production of the enzyme polyphenol oxidase (PPO). However, phenolics concentration in bark‐free conifer wood leachate (12 mg/L), similar to field‐sampled concentrations, did not affect plant growth or PPO production. Pure conifer bark is not recommended as a soil amendment, but the addition of low‐bark‐content wood chips to gully fill may be a feasible and effective means of reducing soil compaction, accelerating plant establishment, and lowering wetland restoration project costs.     

Exposure assessment of potentially toxic trace elements via consumption of fruits and vegetables grown under the impact of Alaverdi's mining complex

This study is aimed to investigate the transfer of potentially toxic trace elements from soils to plants grown under the impact of Alaverdi's mining complex and assess the related dietary exposure to local residents. Contamination levels of potentially toxic trace elements (Cu, Ni, Pb, Zn, Hg, As, Cd) in soils and plants were determined and afterwards, transfer factors, estimated daily intakes, target hazard quotients, and hazard indexes were calculated.

Some trace elements (Pb, Zn, Cd) exceeded the maximum allowable levels. EDIs of Cu, Ni, Hg for the majority of studied fruits and vegetables exceeded the health-based guideline values. Meanwhile, in case of combined consumption of the studied food items, the estimated cumulative daily intakes exceeded health-based guideline values not only for the aforementioned trace elements but also for Zn in the following sequence: Zn > Hg > Ni > Cu. HI > 1 values highlighted the potential adverse health effects for local population through more than one trace element.

Detailed investigations need to be done for the overall assessment of health risks, taking into consideration not only adverse health effects posed by more than one toxic trace element but also through other exposure pathways.