The pi-helix translates structure into function

A search for the occurrence of the rare pi-helix was performed with Iditis from the Oxford Molecular Group upon the Protein Data Bank. In 8 of the 10 confirmed crystal structures that harbor the pi-helix, its unique conformation has been linked directly to the formation or stabilization of a specific binding site within the protein. In the discussion to follow, the role for each of these eight pi-helices will be addressed in regard to protein function. It is clear upon closer examination that the conformation of the pi-helix has evolved to provide unique structural features within a variety of proteins.     

Purification and characterization of protein kinase A from liver of the freeze-tolerant wood frog: role in glycogenolysis during freezing

Freeze tolerance by various amphibians includes cryoprotectant production in the form of glucose. Activation of the catalytic subunit of liver cAMP-dependent protein kinase (PKAc) facilitates activation of glycogenolysis, a critical biochemical process necessary for production of glucose. Here, we purified PKAc from Rana sylvatica liver to determine the extent to which cold temperature, which stimulates cryoprotectant production, affected PKAc activity and function. PKAc was purified to greater than 95% homogeneity, with a final specific activity of 71 nmol phosphate transferred/min/mg protein. The molecular weight of frog liver PKAc was 47.6 +/- 1.1 kDa and K(m) values for the phosphate acceptor kemptide and Mg-ATP were 9.0 +/- 0.1 and 51.8 +/- 1.0 microM at 22 degrees C, respectively. K(m) values for both substrates dropped significantly at 5 degrees C. The enzyme was sensitive to specific inhibitors of mammalian PKAc (PKA(i), H89) but was only moderately inhibited by high salt concentrations. Furthermore, salt inhibition was reduced at low temperature. The effect of temperature on enzyme activity indicated a conformational change in PKAc at 10 +/- 2 degrees C, with calculated activation energies of 51 +/- 4 kJ/mol at temperatures above 10 degrees C and 110 +/- 9 kJ/mol below 10 degrees C. PKAc in wood frog liver plays a crucial role in mediating the freeze-induced glycogenolysis that is responsible for the production of 200-300 mM levels of glucose as a cryoprotectant. Differential effects of low temperature on enzyme function, increased substrate affinity and reduced ion inhibition, appear to be central to this role.     

Notes from some crypt watchers: regulation of renewal in the mouse intestinal epithelium

The mouse intestinal epithelium undergoes rapid renewal throughout life, thereby requiring continuous coordination of its cellular proliferation, differentiation, and death programs. Recent advances in our understanding of this process have highlighted some of the molecules that regulate renewal and their potential roles in gut neoplasia.     

Direct cloning of astrocytes from primary culture without previous immortalization

Summary In primary cultures, much evidence shows the existence of different subtypes of astrocytes that are not all identified. One methodology for studying these subtypes can be their cloning. The present investigation shows a method for a direct cloning of astrocytes without previous immortalization. Astrocytes from the cerebral cortex of newborn rats were cultured, purified by shaking, and harvested by trypsinization. One single astrocyte was plated in a small volume of a homemade cloning medium. After getting a colony, successive platings were made using larger and larger vessels, up to 60-mm-diameter petri dishes. Then, subcultures were made. The yield of the cloning was similar to that of common eukaryotic cell clonings. All along the cloning procedure, the cells were positively immunostained with anti-glial fibrillary acidic protein antibodies. Cloned cells from some batches were spindle-shaped, looking like fibroblasts. Nevertheless, they were immunostained with anti-glial fibrillary acidic protein antibodies, unlike true fibroblasts. These spindle-shaped astrocytes were compared to cells from an astrocytoma cell line that had the same shape. The growth pattern of the astrocytoma cells was different from that of the astrocytes cloned from the primary cultures. All the types of studied cells contained glycogen. On the basis of the criteria of morphology, of glial fibrillary acidic protein immunolabeling, and of glycogen synthesis, the cloned cells kept the characteristics of astrocytes. This study shows that it is perfectly possible to get clones of astrocytes from one astrocyte without previous immortalization, giving thus a convenient material for the study of astrocyte biology.     

Wing morph-related physiological differences in adults of temperate population of Pyrrhocoris apterus (L.) (Heteroptera: Pyrrhocoridae)

The reproductive and diapausing adult females of brachypterous morph and macropterous females with reproductive arrest of non-diapause type, originating from the laboratory cultures of Pyrrhocoris apterus, were studied for their feeding and drinking behaviour, digestive enzyme activities, and carbohydrate and lipid contents. The highest feeding and drinking activities were observed in reproductive brachypters, the lowest in macropters. Macropters also differed from brachypters by lower activities of gut lipase, peptidase and protease, lower concentration of haemolymph sugars, and lower weight of fat body, which probably reflects their low feeding activity. The total content of fat body lipids was also lower in macropters (0.6 mg) than in reproductive and diapausing brachypters (4.6 and 7.5 mg, respectively) on day 14. A very high amount of glycogen was found in the fat body of diapausing brachypters, 363 μg on day 14, as opposed to 15 and 80 μg in macropterous and reproductive brachypterous females, respectively. The obtained data indicate that the most important difference between macropterous and brachypterous females with different types of reproductive arrest consists of an enhanced mobilization of lipids for dispersal in macropters and accumulation of energetic reserves for hibernation in brachypters.     

改良PAS染色法在急性肝损伤中的应用

目的：观察改良肝脏糖原PAS染色法,并观察肝脏糖原染色在急性肝损伤中的应用。方法：复制CCl4急性肝损伤模型,首次100％CCl43 mL／kg皮下注射,此后50％CCl4橄榄油溶液2 mL／kg每周2次共4次皮下注射,诱导大鼠急性肝损伤模型。计算大鼠肝体比;HE染色观察肝组织炎症病理;试剂盒检测血清丙氨酸氨基转移酶（ALT）、天门冬氨酸氨基转移酶（AST）、总胆红素（TBil）、白蛋白（Alb）。肝脏常规PAS染色与改良PAS染色观察肝糖原染色。结果：与正常组相比,模型组ALT、AST活性与TBil含量明显升高（P＜0．05）,Alb含量明显降低（P＜0．05）;HE染色示,模型组肝小叶结构排列紊乱,肝细胞脂肪变、气球样变明显。常规PAS染色,正常组肝组织PAS染色阳性占肝脏面积为32．38％±5．50％;与正常组相比,模型组肝组织PAS阳性染色明显减少（P＜0．01）,占肝脏面积为8．60％±3．34％。改良PAS染色提示,正常组肝脏可见大量PAS阳性染色,占肝脏面积为75．50％±9．02％;与正常组相比,模型组肝组织PAS阳性染色明显减少（P＜0．01）,占肝脏面积为17．61％±3．53％。在空白对照组与模型肝组织中,肝糖原改良PAS染色阳性率明显高于常规PAS染色法（P＜0．01）。改良PAS染色肝糖原阳性染色面积更真实反映急性肝损伤程度。结论：改良肝脏糖原PAS染色法有助于急性肝损伤程度评估。     

滞育七星瓢虫的代谢适应与抗寒性评价

滞育是部分昆虫固有的适应逆境胁迫的遗传属性,七星瓢虫具有显著的滞育现象。本文以七星瓢虫雌成虫为试材,研究正常发育、滞育及滞育解除后3组处理试虫糖、脂、蛋白等关键代谢物质含量波动规律,总结滞育期间的代谢适应特点,解析其与过冷却能力的相关性,探索滞育对七星瓢虫逆境胁迫耐受力的促升效应,丰富七星瓢虫的滞育基础理论研究。利用物质干湿重差数法测定七星瓢虫的含水量;利用氯仿-甲醇(体积比为2∶1)法抽提除去自由水个体的脂肪;总糖、海藻糖、甘油、山梨醇及总蛋白的测定采用标准曲线法,利用SUN-II型智能昆虫过冷却点测定仪测定七星瓢虫的过冷却点(supercooling point,SCP)。结果表明,七星瓢虫滞育组含水量(58.11%±6.55%)显著低于正常发育组(68.49%±2.26%)和滞育解除组(65.84%±4.02%)(F=8.15,P0.01),滞育解除后含水量恢复至正常发育组水平;滞育组总糖(10.60±0.54μg/mg)、糖原(8.72±0.62μg/mg)、脂肪(173.66±19.01μg/mg)含量远远高于正常发育组和滞育解除组(F=46.57,P=0.0006;F=114.25,P0.0001;F=8.48,P0.01);滞育组总蛋白含量(49.20±3.80μg/mg)显著低于正常发育组(71.02±6.15μg/mg)和滞育解除组(69.45±4.66μg/mg)(F=46.57,P=0.0006);滞育组中海藻糖(1.31±0.27μg/mg)、甘油(1.74±0.50μg/mg)、山梨醇(9.84±3.02μg/mg)含量与正常发育组、滞育解除组无显著性差异(F=0.79,P=0.4946;F=1.33,P=0.3004;F=1.69,P=0.2387)。七星瓢虫在滞育条件下其过冷却点(-16.53℃±1.44℃)显著低于正常发育组(-14.07℃±1.33℃)和滞育解除组(-15.29℃±2.10℃)(F=13.47,P0.0001),经过滞育低温驯化后滞育解除组过冷却点较对照组有所降低。滞育诱发七星瓢虫发生显著的代谢适应,蛋白含量显著降低,抑制新陈代谢进程;糖脂含量显著升高,保障滞育维持及解除后发育的能量需求;七星瓢虫滞育属糖原积累型;滞育个体过冷却点大幅下降,耐寒性显著提升。     

Thermal denaturation and aggregation of apoform of glycogen phosphorylase b. Effect of crowding agents and chaperones

The effect of protein and chemical chaperones and crowders on thermal stability and aggregation of apoform of rabbit muscle glycogen phosphorylase b (apoPhb) has been studied at 37°C. Proline suppressed heat‐induced loss in ability of apoPhb to reconstitution at 37°C, whereas α‐crystallin did not reveal a protective action. To compare the antiaggregation activity of intact and crosslinked α‐crystallins, an adsorption capacity (AC) of a protein chaperone with respect to a target protein was estimated. This parameter is a measure of the antiaggregation activity. Crosslinking of α‐crystallin results in 11‐fold decrease in the initial AC. The nonlinear character of the relative initial rate of apoPhb aggregation versus the [intact α‐crystallin]/[apoPhb] ratio plot is indicative of the decrease in the AC of α‐crystallin with increasing the [α‐crystallin]/[apoPhb] ratio and can be interpreted as an evidence for dynamic chaperone structure and polydispersity of α‐crystallin–target protein complexes. As for chemical chaperones, a semisaturation concentration of the latter was used as a characteristic of the antiaggregation activity. A decrease in the semisaturation concentration for proline was observed in the presence of the crowders (polyethylene glycol and Ficoll‐70). © 2013 Wiley Periodicals, Inc. Biopolymers 101: 504–516, 2014.