Mercury in mercury(II)-spiked soils is highly susceptible to plant bioaccumulation

Heavy metal phytotoxicity assessments usually use soluble metal compounds in spiked soils to evaluate metal bioaccumulation, growth inhibition and adverse effects on physiological parameters. However, exampling mercury phytotoxicity for barley (Hordeum vulgare) this paper highlights unsuitability of this experimental approach. Mercury(II) in spiked soils is extremely bioavailable, and there experimentally determined bioaccumulation is significantly higher compared to reported mercury bioaccumulation efficiency from soils collected from mercury-polluted areas. Our results indicate this is not affected by soil sorption capacity, thus soil ageing and formation of more stable mercuric complexes with soil fractions is necessary for reasonable metal phytotoxicity assessments.     

樟芝固态发酵产物抗氧化性分析

本文对樟芝谷物固态发酵产物抗氧化性能及活性成分进行了研究.在所选谷物中,樟芝青稞固态发酵产物的乙醇提取物总抗氧化性最好,较未发酵青稞提高了4.02倍.通过无水乙醇50℃水浴振荡提取80 min,其总抗氧化性达到了769.60 U/g.对其抗氧化性能分析发现,樟芝青稞固态发酵乙醇提取物为6 mg/L时,对DP P H自由基、羟基自由基以及超氧阴离子的去除率分别为91.9%、51.2%、61.3%,对铁离子的螯合能力为79.5%.相对于未发酵谷物,大米、小米、玉米以及青稞的樟芝发酵产物中总酚含量均有显著的提升,其中青稞乙醇提取和水提取物中总酚含量分别提高了2.36倍和4.23倍.通过HP LC分析可知,樟芝固态发酵产物含有丰富的活性化合物,包括马来酸衍生物(Antrodin)以及泛醌类衍生物(Antroquinonol),且各组分含量较为均衡;而樟芝液态发酵菌丝体乙醇提取物中主要活性成分为马来酸衍生物,不含有泛醌类化合物.     

有色大麦种质芽期耐盐性鉴定

以44份有色大麦种质为试材,通过测定发芽势、发芽率、发芽指数、萌发活力指数结合两个颜色指标YU(颜色亮度和浓度)进行芽期的耐盐性鉴定,并运用相关性分析、主成分分析、聚类分析等方法对有色大麦材料进行多指标耐盐性综合评价。结果表明,发芽率和发芽指数对盐胁迫响应最为敏感,芽长和根长对盐胁迫响应较为迟钝;粒色亮度与耐盐性综合评价F值呈显著负相关;粒色浓度与耐盐性综合评价F值呈显著正相关;综合指标F值相关分析表明,颜色越深,耐盐性越强;用综合指标F值,可将44份有色大麦分为4类,其中强耐盐材料包括XZDM-1401、XZDM-1404、XZDM-1543、XZDM-1546等4份,中等耐盐性包括XZDM-926、XZDM-957、XZDM-972等16份,弱耐盐性包括XZDM-815、XZDM-1606、XZDM-1030等12份,敏盐性包括XZDM-973、XZDM-1042、XZDM-1318等12份。     

Exome sequences and multi‐environment field trials elucidate the genetic basis of adaptation in barley

Broadening the genetic base of crops is crucial for developing varieties to respond to global agricultural challenges such as climate change. Here, we analysed a diverse panel of 371 domesticated lines of the model crop barley to explore the genetics of crop adaptation. We first collected exome sequence data and phenotypes of key life history traits from contrasting multi‐environment common garden trials. Then we applied refined statistical methods, including some based on exomic haplotype states, for genotype‐by‐environment (G×E) modelling. Sub‐populations defined from exomic profiles were coincident with barley's biology, geography and history, and explained a high proportion of trial phenotypic variance. Clear G×E interactions indicated adaptation profiles that varied for landraces and cultivars. Exploration of circadian clock‐related genes, associated with the environmentally adaptive days to heading trait (crucial for the crop's spread from the Fertile Crescent), illustrated complexities in G×E effect directions, and the importance of latitudinally based genic context in the expression of large‐effect alleles. Our analysis supports a gene‐level scientific understanding of crop adaption and leads to practical opportunities for crop improvement, allowing the prioritisation of genomic regions and particular sets of lines for breeding efforts seeking to cope with climate change and other stresses.     

Genetic association with high‐resolution climate data reveals selection footprints in the genomes of barley landraces across the Iberian Peninsula

Landraces are local populations of crop plants adapted to a particular environment. Extant landraces are surviving genetic archives, keeping signatures of the selection processes experienced by them until settling in their current niches. This study intends to establish relationships between genetic diversity of barley (Hordeum vulgare L.) landraces collected in Spain and the climate of their collection sites. A high‐resolution climatic data set (5 × 5 km spatial, 1‐day temporal grid) was computed from over 2,000 temperature and 7,000 precipitation stations across peninsular Spain. This data set, spanning the period 1981–2010, was used to derive agroclimatic variables meaningful for cereal production at the collection sites of 135 barley landraces. Variables summarize temperature, precipitation, evapotranspiration, potential vernalization and frost probability at different times of the year and time scales (season and month). SNP genotyping of the landraces was carried out combining Illumina Infinium assays and genotyping‐by‐sequencing, yielding 9,920 biallelic markers (7,479 with position on the barley reference genome). The association of these SNPs with agroclimatic variables was analysed at two levels of genetic diversity, with and without taking into account population structure. The whole data sets and analysis pipelines are documented and available at https://eead-csic-compbio.github.io/barley-agroclimatic-association . We found differential adaptation of the germplasm groups identified to be dominated by reactions to cold temperature and late‐season frost occurrence, as well as to water availability. Several significant associations pointing at specific adaptations to agroclimatic features related to temperature and water availability were observed, and candidate genes underlying some of the main regions are proposed.     

Feed intake and performance of growing lambs raised on concentrate-based diets under cafeteria feeding systems

Two trials were undertaken to study the effects of cafeteria feeding systems on the feed intake, animal performance and carcass characteristics of growing lambs. Trial 1 was designed to compare conventional and cafeteria feeding systems in terms of the growth of individually reared lambs. For this assay, 26 weaned Merino lambs (15.5 ± 0.20 kg live weight) were assigned to three dietary treatment groups: (1) a control group fed barley straw and commercial concentrate under a conventional feeding system, (2) group W100S, fed soya-bean meal, whole barley grain and a mineral-vitamin supplement under a cafeteria feeding system, and (3) group W100S-T, fed as in the W100S treatment but allowing the lambs an initial training period so they could learn to identify a number of feeds. The feeding system had no significant effect ( P>0.05) on either average daily live-weight gain, carcass weight, or carcass conformation. The food conversion ratio was lower ( P < 0.05) for the cafeteria-reared animals (2.9 ± 0.16 v. 2.5 ± 0.08 g dry-matter intake per g average daily gain) than those of the control group. This might be related to the higher crude protein intake seen in the cafeteria groups (150 ± 5.6 v. 208 ± 12.5 g per animal per day; P < 0.001).In trial 2, cafeteria and conventional feeding system were compared in terms of the growth of feedlot lambs. Two hundred weaned Merino lambs (13.1 ± 0.10 kg) were divided into two experimental groups: (1) a control group, offered commercial concentrate and barley straw, and (2) a cafeteria group fed the same diet as W100ST in trial 1. The average daily gain (282 ± 5.8 and 309 ± 6.5; P < 0.01) was greater in the cafeteria than in the control group. Whereas neither carcass conformation nor fatness were affected by the feeding system, the dressing percentage was slightly higher ( P>0.001) in the conventional than in the cafeteria system lambs.The use of cafeteria systems for fattening lambs can improve the feed conversion efficiency and body growth rate over those achieved with conventional feeding systems, although the crude protein intake in these systems seems to be in excess of requirements.     

Effects of Salicylic Acid on the Structure of Second Leaves of Hordeum Vulgare L.

The structure and ultrastructure of the second leaves of 10-d-old barley plants (Hordeum vulgare L. cv. Alfa) was investigated after long-term treatment with salicylic acid (SA) in concentrations of 0.1, 0.5 and 1.0 mM. The treatment induced: 1) suppressed bulliform cells formation in the adaxial epidermis (1.0 mM SA); 2) reduction of apoplast in the mesophyll (0.5 and 1.0 mM SA); 3) formation of invaginations (0.1 and 0.5 mM SA) and proliferations (0.5 mM SA); and 4) thylakoid destruction and coagulation of the stroma (1.0 mM SA).     

RAPD divergence caused by microsite edaphic selection in wild barley

Random amplified polymorphic DNA polymerase chain reaction (RAPDPCR) was used to assess genetic diversity in four subpopulations (86 individuals) of wild barley, Hordeum spontaneum, sampled from Tabigha microsite near the Sea of Galilee, Israel. The microsite consists of two 100 m transects that are topographically separated by 100 m, each equally subdivided into 50 m of basalt and terra rossa soil types. Despite the same macroclimate characterizing the area around the Sea of Galilee, the microsite offers two edaphically different microhabitats, with basalt being a more ecologically heterogeneous and broader-niche than the relatively drier but more homogeneous and narrow-niche terra rossa. Analysis of 118 putative loci revealed significant (P<0.05) genetic differentiation in polymorphism (P0.05) between the two soils across the transects with P being higher in the more heterogeneous basalt (mean P0.05 = 0.902), than in terra rossa (mean P0.05 = 0.820). Gene diversity (He) was higher in basalt (mean He=0.371), than in terra rossa (mean He=0.259). Furthermore, unique alleles were confined to one soil type, either in one or both transects. Rare alleles were observed more frequently in terra rossa than basalt, and in transect II only. Gametic phase disequilibria showed a larger multilocus association of alleles in basalt than terra rossa, and in transect I than II. Spearman rank correlation (r_s) revealed a strong association between specific loci and soil types, and transects. Also, analysis of multilocus organization revealed soil-specific multilocus-genotypes. Therefore, our results suggest an edaphically differentiated genetic structure, which corroborates the niche width-variation hypothesis, and can be explained, in part, by natural selection. This pattern of RAPD diversity is in agreement with allozyme and hordein protein diversities in the same subpopulations studied previously. This revised version was published online in July 2006 with corrections to the Cover Date.