Occurrence of crown gall disease on Ficus benjamina in Fars and Isfahan provinces of Iran

Ficus benjamina, commonly known as weeping fig, Benjamin’s fig or Ficus tree is a species of flowering plant in the family of Moraceae. It is native to south and south-east Asia and Australia. Crown gall tumours were collected from branches of one-year-old weeping fig (F. benjamina L.) trees. A total of 50 strains of Agrobacterium tumefaciens were isolated from diseased Ficus plants and their morphological, molecular and biochemical characteristics were studied; pathogenicity tests on tomato, F. benjamina and Bryophyllum daigremontianum were also conducted. Based on the biochemical characteristics, pathogenicity test and PCR amplification of 730?bp fragment using VCR\VCF primers, the tested bacterial strains were identified as A. tumefaciens. This is the first report of crown gall on F. benjamina in Isfahan and Fars provinces of Iran.     

Measuring the discrepancy between fecundity and lifetime reproductive success in a pollinating fig wasp

Lifetime reproductive success in female insects is often egg‐ or time‐limited. For instance in pro‐ovigenic species, when oviposition sites are abundant, females may quickly become devoid of eggs. Conversely, in the absence of suitable oviposition sites, females may die before laying all of their eggs. In pollinating fig wasps (Hymenoptera: Agaonidae), each species has an obligate mutualism with its host fig tree species [Ficus spp. (Moraceae)]. These pro‐ovigenic wasps oviposit in individual ovaries within the inflorescences of monoecious Ficus (syconia, or ‘figs’), which contain many flowers. Each female flower can thus become a seed or be converted into a wasp gall. The mystery is that the wasps never oviposit in all fig ovaries, even when a fig contains enough wasp females with enough eggs to do so. The failure of all wasps to translate all of their eggs into offspring clearly contributes to mutualism persistence, but the underlying causal mechanisms are unclear. We found in an undescribed Brazilian Pegoscapus wasp population that the lifetime reproductive success of lone foundresses was relatively unaffected by constraints on oviposition. The number of offspring produced by lone foundresses experimentally introduced into receptive figs was generally lower than the numbers of eggs carried, despite the fact that the wasps were able to lay all or most of their eggs. Because we excluded any effects of intraspecific competitors and parasitic non‐pollinating wasps, our data suggest that some pollinators produce few offspring because some of their eggs or larvae are unviable or are victims of plant defences.     

Contrasting patterns of fig wasp communities along Mt. Wilhelm,Papua New Guinea

The fig (Moraceae) and pollinating fig wasp (Agaonidae) mutualism is best known as a model system for the study of coevolution in plant–pollinator interactions and its central role in shaping vertebrate communities in tropical forests. Figs also host myriad antagonistic parasitic fig wasps which impose costs on both partners threatening mutualism stability. Spatiotemporal variation in parasitic wasp abundance is a key factor in mitigating these effects. Because fig wasps are temperature sensitive and likely vary in their ability to traverse environmental gradients, we expect community assemblages and abundance of both pollinating and non-pollinating fig wasps to respond to changes along an elevational gradient. In the present study, we compare the fig wasp communities and abundance of three fig species growing along the slopes of the Mount Wilhelm altitudinal gradient in Papua New Guinea. We quantified wasps from over 100 male fig trees and calculated seed set for 55 female trees along each of the species’ distribution on the transect. Our results show that the abundance of both pollinating and non-pollinating fig wasps follow a mid-elevation peak, consistent with fig species richness found in the same transect. The patterns, however, are different according to the host's species distribution. Seed set remained relatively constant along the gradient for all species with some decrease along higher elevations, potentially affecting connectivity along the gradient. As suggested for insects in general, temperature and habitat diversity appear to play a fundamental role in the species richness and abundance of fig wasps.     

Molecular Characteristics of Water-soluble Polysaccharide Extracted from Jelly Fig (Ficus awkeotsang Makino) Seeds

The molecular characteristics of polysaccharide obtained by extracting with water from jelly fig (Ficus awkeotsang Makino) seeds were elucidated by measuring the weight-average molecular weight (M_w) and radius of gyration (R_G), indicating the molecular expanse, by the light-scattering method.

The M_w and R_G values of the water-soluble jelly fig polysaccharide were 84–130 × 10⁴ and 240–450 mm, respectively, these values being larger than those of commercial LM pectin and HM pectin. In addition, the M_w and R_G values of the water-soluble jelly fig polysaccharide initially increased after being extracted, indicating the highest values 5 hours after the extraction, and thereafter decreased. These changes in the time-course of the molecule reflected well the changes with time in the mechanical characteristics and network structure of the water-soluble jelly fig polysaccharide gel. Exponent α in the expression was found to be 0.37. From these results, the conformation of the water-soluble jelly fig polysaccharide molecule after association by the contained inorganic elements proved to be of globular form rather than a random coil shape as a result of contraction of the molecule.     

Gene Families Encoding 11S Globulin and 2S Albumin Isoforms of Jelly Fig (Ficus awkeotsang) Achenes

Seed storage proteins of plants commonly comprise several groups of multiple isoforms encoded by gene families. From about 300 expressed sequence tag (EST) clones in maturing jelly fig (Ficus awkeotsang Makino) achenes, gene families encoding precursor polypeptides of two storage protein classes, including six 11S globulin isoforms and two 2S albumin isoforms, were identified. Complete sequences encoding the precursor polypeptides of these eight storage proteins were obtained by sequencing the pertinent EST clones that contained full-length cDNA fragments. Matrix-assisted laser desorption/ionization mass spectrometry analysis confirmed the presence of these storage protein isoforms in the extract of jelly fig achenes resolved in SDS–PAGE. The amino acid compositions of the deduced storage proteins indicated that achene proteins in jelly fig are nutritive, for both isoforms of 2S albumin are sulfur-rich, and one of them is also rich in tryptophan.     

大果榕茎的化学成分(英文)

运用硅胶柱色谱和Sephadex LH-20柱色谱,以及制备薄层色谱等方法从大果榕茎的95%乙醇提取物中分离得到11个化合物,通过理化性质和波谱数据鉴定为:染料木黄酮(1),wighteone(2),5,7,4’,trihydroxy-6-(2-hydroxy-3-methyl-3-butenyl)isoflavone(3),5,7,4’-trihydroxy-3’-(2-hydroxy-3-methyl-3-butenyl)isoflavone(4),alpin-umisoflavone(5),derrone(6),(3R)-5-formylmellein(7),3β-(1-Hydroxyethyl)-7-hydroxy-1-isobenzofuranone(8),反式对羟基肉桂酸乙酯(9),β-谷甾醇(10),β-胡萝卜苷(11)。化合物4,7,8,9为首次从该属植物中分离得到,化合物1-10为首次从该植物中分离得到。     

Epigenetic patterns within the haplotype phased fig (Ficus carica L.) genome

Due to DNA heterozygosity and repeat content, assembly of non‐model plant genomes is challenging. Herein, we report a high‐quality genome reference of one of the oldest known domesticated species, fig (Ficus carica L.), using Pacific Biosciences single‐molecule, real‐time sequencing. The fig genome is ~333 Mbp in size, of which 80% has been anchored to 13 chromosomes. Genome‐wide analysis of N⁶‐methyladenine and N⁴‐methylcytosine revealed high methylation levels in both genes and transposable elements, and a prevalence of methylated over non‐methylated genes. Furthermore, the characterization of N⁶‐methyladenine sites led to the identification of ANHGA, a species‐specific motif, which is prevalent for both genes and transposable elements. Finally, exploiting the contiguity of the 13 pseudomolecules, we identified 13 putative centromeric regions. The high‐quality reference genome and the characterization of methylation profiles, provides an important resource for both fig breeding and for fundamental research into the relationship between epigenetic changes and phenotype, using fig as a model species.     

The Ficus erecta genome aids Ceratocystis canker resistance breeding in common fig (F. carica)

Ficus erecta, a wild relative of the common fig (F. carica), is a donor of Ceratocystis canker resistance in fig breeding programmes. Interspecific hybridization followed by recurrent backcrossing is an effective method to transfer the resistance trait from wild to cultivated fig. However, this process is time consuming and labour intensive for trees, especially for gynodioecious plants such as fig. In this study, genome resources were developed for F. erecta to facilitate fig breeding programmes. The genome sequence of F. erecta was determined using single‐molecule real‐time sequencing technology. The resultant assembly spanned 331.6 Mb with 538 contigs and an N50 length of 1.9 Mb, from which 51 806 high‐confidence genes were predicted. Pseudomolecule sequences corresponding to the chromosomes of F. erecta were established with a genetic map based on single nucleotide polymorphisms from double‐digest restriction‐site‐associated DNA sequencing. Subsequent linkage analysis and whole‐genome resequencing identified a candidate gene for the Ceratocystis canker resistance trait. Genome‐wide genotyping analysis enabled the selection of female lines that possessed resistance and effective elimination of the donor genome from the progeny. The genome resources provided in this study will accelerate and enhance disease‐resistance breeding programmes in fig.     

Antioxidant activity of a new C-glycosylflavone from the leaves of Ficus microcarpa

By bioactive-guided fractionation of methanol extract of the Ficus microcarpa leaves, one new C-glucosylflavone, ficuflavoside (1), one new megastigmane glycoside, ficumegasoside (8), and twelve known compounds including flavonoids (2-6), phenylpropanoids (7), megastigmanes (9-11) and sterol derivatives (12-14) were isolated. Their chemical structures were elucidated by mass, 1D, and 2D NMR spectroscopies. The antioxidant activities of these compounds were measured using the oxygen radical absorbance capacity methods. Compounds 1-6 exhibited potent antioxidant activities of 6.6-9.5 μM Trolox equivalents at the concentration of 2.0 μM. The results indicated 2, 3, and 5 having meaningful reducing capacity of copper (I) ions concentration of 6.1-8.4 μM.     

高山榕染色体制片优化及核型分析

以高山榕种子的根尖为材料进行染色体常规压片,比较不同预处理方法和解离方法对高山榕染色体制片的影响,以选择最优的压片方法制片并进行核型分析。结果显示,预处理24 h的总体效果优于12 h;3种预处理液的总体作用效果为0.05%秋水仙素>混合液>0.002 mol.L-18-羟基喹啉,综合比较后认为混合液低温4℃处理24 h为最佳预处理方法。解离方法选择1 mol.L-1HCl中60℃水浴2~3 min较为适宜。首次报道了高山榕核型公式为2n=2x=30=22m(2SAT)+6sm+2T,核型不对称系数为61.54%,核型属于Stebbins核型分类中的2C类型。