Molecular dynamics simulation of temperature induced unfolding of animal prion protein

To elucidate the structural stability and the unfolding dynamics of the animal prion protein, the temperature induced structural evolution of turtle prion protein (tPrPc) and bank vole prion protein (bvPrPc) have been performed with molecular dynamics (MD) simulation. The unfolding behaviors of secondary structures showed that the α-helix was more stable than β-sheet. Extension and disruption of β-sheet commonly appeared in the temperature induced unfolding process. The conversion of α-helix to π-helix occurred more readily at the elevating temperature. Furthermore, it was suggested in this work that the unfolding of prion protein could be regulated by the temperature.

Rice domestication influences the composition and function of the rhizosphere bacterial chemotaxis systems

Plant and Soil - Specific soil bacteria can sense and respond to the selective rhizosphere recruitment of root exudates using unique systems of chemotaxis that mediate plant-microbe and...     

不同佐剂条件下Aβ多肽B细胞表位疫苗诱导产生抗体的免疫反应特性分析

目的:研究阿尔茨海默病β淀粉样肽(Aβ)B细胞表位疫苗2Aβ1-15-PADRE(Aβ-T)诱导产生抗体的免疫反应特性,并探讨不同佐剂对该疫苗免疫反应效果的影响。方法:合成了含2个Aβ42的 B细胞表位—Aβ1-15及1个辅助T细胞表位—PADRE的多肽2Aβ1-15-PADRE。采用Al(OH)₃佐剂,弗氏佐剂,Abisco佐剂,MF59佐剂分别与多肽疫苗联合免疫小鼠,并另设3个对照组:无佐剂多肽免疫组(Mock),PBS免疫组(PBS),未免疫组(Native)。结果:5组多肽免疫组小鼠均产生了针对Aβ的特异性抗体,无佐剂多肽免疫组的IgG抗体滴度最低,Al(OH)₃佐剂组,MF59佐剂组,Abisco佐剂组小鼠IgG抗体滴度较高,弗氏佐剂组IgG抗体滴度最高。斑点杂交实验结果显示5组小鼠免疫后血清与Aβ42单体反应较弱,与寡聚体反应最明显,与纤维状Aβ42几乎不反应。结论:4种佐剂均能提高多肽疫苗的免疫反应,产生高水平抗Aβ的特异性抗体。5组免疫小鼠产生的抗体均与Aβ寡聚体反应较强,与纤维状Aβ42反应较弱,表明该多肽疫苗具有良好的应用前景。     

The anti-inflammatory potential of neuropeptide FF in vitro and in vivo

Neuropeptide FF (NPFF) has many functions in regulating various biological processes. However, little attention has been focused on the anti-inflammatory effect of this peptide. In the present study, the in vitro anti-inflammatory activity of NPFF in both primary peritoneal macrophages and RAW 264.7 macrophages was investigated. Our data showed that NPFF suppressed the nitric oxide (NO) production of macrophages in the inflammation process. RF9, a reported antagonist of NPFF receptors, completely blocked the NPFF-induced NO suppression, suggesting a NPFF receptors-mediated pathway is mainly involved. Down-regulation of the nitric oxide synthases significantly inhibited the NPFF-induced NO reduction, indicating the involvement of nitric oxide synthases. However, the nitric oxide synthases were not the only route by which NPFF modulated the NO levels of macrophages. Pharmacological antagonists of the NF-κB signal pathway also completely suppressed the NPFF-induced NO decline. Moreover, we also observed that NPFF is capable of blocking the LPS-induced nuclear translocation of p65 in macrophages, implying the involvement of the NF-κB signal pathway. Finally, we observed that NPFF markedly attenuated the carrageenan-induced mouse paw edema, indicating that NPFF is capable of exerting anti-inflammatory potency in vivo. Collectively, our findings reveal the potential role of NPFF in the anti-inflammatory field both in vitro and in vivo, which will be helpful for the further exploitation of NPFF utility therapeutically.     

Maize leaf temperature responses to drought: Thermal imaging and quantitative trait loci (QTL) mapping

Leaf temperature has been shown to vary when plants are subjected to water stress conditions. Recent advances in infrared thermography have increased the probability of recording drought tolerant responses more accurately. The aims of this study were to identify the effects of drought on leaf temperature using infrared thermography. Furthermore, the genomic regions responsible for the expression of leaf temperature variation in maize seedlings (Zea mays L.) were explored. The maize inbred lines Zong3 and 87-1 were evaluated using infrared thermography and exhibited notable differences in leaf temperature response to water stress. Correlation analysis indicated that leaf temperature response to water stress played an integral role in maize biomass accumulation. Additionally, a mapping population of 187 recombinant inbred lines (RILs) derived from a cross between Zong3 and 87-1 was constructed to identify quantitative trait loci (QTL) responsible for physiological traits associated with seedling water stress. Leaf temperature differences (LTD) and the drought tolerance index (DTI) of shoot fresh weight (SFW) and shoot dry weight (SDW) were the traits evaluated for QTL analysis in maize seedlings. A total of nine QTL were detected by composite interval mapping (CIM) for the three traits (LTD, RSFW and RSDW). Two co-locations responsible for both RSFW and RSDW were detected on chromosomes 1 and 2, respectively, which showed common signs with their trait correlations. Another co-location was detected on chromosome 9 between LTD and shoot biomass, which provided genetic evidence that leaf temperature affects biomass accumulation. Additionally, the utility of a thermography system for drought tolerance breeding in maize was discussed.     

共聚焦显微技术研究SA对蚕豆气孔保卫细胞的影响

水杨酸(salicylic acid,SA)作为植物体内一种内源性的信号分子,具有多种生理功能.实验表明水杨酸以浓度依赖的方式诱导气孔关闭,抑制气孔张开.20U/mL的CAT与SA共同处理时可逆转SA诱导气孔关闭作用的83%~90%.以H2O2荧光探针H2DCFDA结合激光扫描共聚焦显微术直接检测到SA处理可引起保卫细胞内H2O2的产生;在保卫细胞内显微注射CAT可完全阻止SA导致的DCF荧光增强.表明SA诱导的气孔关闭可能与H2O2的产生有关.     

矮岩羊行为生态的初步研究

2006年8月,在四川巴塘县竹巴笼自然保护区对矮岩羊的行为生态进行了研究。共发现矮岩羊7个集群33只,集群平均大小为4.71±1.60只;矮岩羊在夏季9:00~10:00内主要用于卧息,占该段活动时间的76.72%;因子分析显示:矮岩羊对生境的利用具有选择性,影响矮岩羊生境选择行为的主要因子为草因子、灌木因子、坡度和活动基底特征。     

渗透胁迫对黑麦幼苗活性氧和抗氧化酶活性的影响

用20%聚乙二醇（PEG 6000）研究了渗透胁迫对黑麦（Secale cereale L.）幼苗活性氧（reactive oxygen species,ROS）和主要抗氧化酶——超氧化物歧化酶（superoxide dismutase,SOD）、过氧化氢酶（catalase,CAT）、抗坏血酸过氧化物酶（ascorbate peroxidase,APX）和谷胱甘肽还原酶（glutathione reductase,GR）活性的影响。结果表明,与对照相比,PEG处理明显提高了叶子和根中丙二醛（malondialdehyde,MDA）的含量、ROS的水平和以上4种抗氧化酶的活性。渗透胁迫下,叶子和根中MDA和ROS水平变化的规律基本相似,但抗氧化酶活性在2种器官中表现不完全相同,叶子中CAT的活性在对照和处理中无显著差异,但在根中差异明显,表明叶子中SOD、APX和GR在植物应答渗透胁迫中起重要作用,而根中这4种抗氧化酶都参与植物对胁迫的反应。GR活性随PEG处理变化幅度显著高于其它抗氧化酶,表明GR在黑麦应答渗透胁迫中所起作用可能强于其它抗氧化酶。     

Cloning and analysis of a novel conserved membrane zinc-metalloprotease family from <Emphasis Type="Italic">Solanum surattense</Emphasis>

Peptidases occur naturally in all organisms and their genes comprise 1–5% of the total number of genes. Genetic, biochemical, and molecular approaches used in recent years led to the identification and characterization of several plant organelle proteases, all of them being homologous to bacterial proteases best characterized in Escherichia coli. Here we report isolating and characterizing three novel genes, namely Sszn-mp1, Sszn-mp2, and SsZn-mp3 from Solanum surattense. To identify the subcellular location, structures, and functions of these three genes, integrated genomic approaches of data mining, expression profiling, and bioinformatic predictions were used. Sszn-mp is found to be constitutively expressed in tissues and regulated by various stimuli. Analysis of eight zinc-metalloproteases (Zn-MPs) deduced or assembled from Arabidopsis thaliana, tomato, potato, cotton, barley, sugarcane, and rice and four Zn-MPs from cyanobacteria (blue-green algae) in the GenBank database reveals that these proteins belong to a novel conserved membrane zinc-metalloprotease family. The plant Zn-MP members share more than 62% overall identity with SsZn-MP3, whereas four putative ATP-dependent zinc-proteases of cyanobacteria have low identity with SsZn-MP3 and their N-termini are about 110 amino acids shorter than those of plant Zn-MPs. The Zn-MP homologous sequences are found neither in other eukaryotic nor prokaryotic databases, suggesting that this family is specific to plants and cyanobacteria. The plant Zn-MP genes encoding membrane proteins are potentially targeted to chloroplast and plasma membranes, and the bacterial Zn-MPs are targeted to the cytoplasmic membrane, and their N-terminal targeting peptides are cleaved off for targeting the mature proteins to their subcellular compartments. The Zn-MP proteins contain a conserved zinc-binding site (HEAGHX19E/DX46∼48EX7E), a potential G-protein coupled receptors family 1 signature, and a triplet motif (N-R/K-F) in plant Zn-MPs, a D/E-R-Y motif in the four bacterial Zn-MPs, suggesting that the different mature forms of Zn-MPs may function as proteases and/or signal receptors. Published in Russian in Fiziologiya Rastenii, 2007, Vol. 54, No. 1, pp. 73–84. The text was submitted by the authors in English.