微生物乙内酰脲酶及其研究进展

乙内酰脲酶是广泛分布在微生物中的一类可降解乙内酰脲酶类化合物的酶系 ,包括乙内酰脲水解酶、N-氨甲酰氨基酸水解酶及乙内酰脲消旋酶。微生物的乙内酰脲酶在结构与组成、立体选择性、底物专一性、反应条件和作用机制等方面有所不同 ,在各种 L-及 D-型氨基酸的酶法生产中具有良好的应用前景。本文对乙内酰脲酶研究及应用的一般情况作了概述 ,并讨论了有关乙内酰脲酶研究的主要研究进展     

乙内酰脲水解酶基因在大肠杆菌中的克隆表达

节杆菌BT801的乙内酰脲酶系能够水解5-苄基乙内酰脲生成L-苯丙氨酸,其中乙内酰脲水解酶负责乙内酰脲的水解开环。乙内酰脲水解酶的表达对于乙内酰脲酶的催化机制研究及氨基酸的生物不对称合成都具有重要意义。通过PCR技术扩增得到乙内酰脲水解酶基因(hyuH),置于表达载体pT221的,17启动子下游,将构建的重组质粒引入大肠杆菌BL21(DE3)。SDS-PAGE分析在相对分子量50kD处有一较强的表达带,经薄层扫描分析目的蛋白占全菌蛋白的40％,主要以可溶性形式存在,活性分析表明表达产物具有天然的酶活性。     

Arthrobacter K1108乙内酰脲酶反应条件和立体选择性研究

研究了Arthrobacter K1108乙内酰脲酶的反应条件,结果表明,K1108乙内酰脲酶的最适反应温度为55℃,最适pH为7.0,Co^2 和Fe^2 对该酶有激活作用,而Ca^2 有严重抑制作用。K1108乙内酰脲酶的底物专一性较强,其最适底物为5－苄基乙内酰脲,5－苯基乙内酰脲和5－吲哚甲基乙内酰脲均不能作为其有效底物。对K1108乙内酰脲酶立体反应机制研究结果表明,其乙内酰脲水解酶不具立体选择性,决定产物立体构型的酶是N－氨甲酰氨基酸水解酶。     

节杆菌K1108乙内酰脲酶三维结构的模建和分析

利用同源模建技术,以节杆菌DSM3745乙内酰脲酶的晶体结构为模板,模建了节杆菌K1108乙内酰脲酶的三维结构。模建的节杆菌K1108乙内酰脲酶结构由一个中心的(α/β)g捅状结构域和富含β-折叠的结构域两个区域组成,富含β-折叠的结构域在中心(α/β)g捅状结构域的侧面,由分子的N端和C端组成。根据K1108乙内酰脲酶和其它酶在结构和活性部位的保守性,确定了K1108乙内酰脲酶的底物结合部位,并对酶的活性中心的特征进行了分析,对L-Hyd的底物选择性进行了解释。     

Arthrobacter K1108乙内酰脲酶反应条件和立体选择性研究

研究了ArthrobacterK110 8乙内酰脲酶的反应条件 ,结果表明 ,K1108乙内酰脲酶的最适反应温度为 55℃ ,最适pH为 70 ,Co²⁺ 和Fe²⁺ 对该酶有激活作用 ,而Ca²⁺ 有严重抑制作用。K1108乙内酰脲酶的底物专一性较强 ,其最适底物为 5 苄基乙内酰脲 ,5 苯基乙内酰脲和 5 吲哚甲基乙内酰脲均不能作为其有效底物。对K1108乙内酰脲酶立体反应机制研究结果表明 ,其乙内酰脲水解酶不具立体选择性 ,决定产物立体构型的酶是N 氨甲酰氨基酸水解酶。     

节杆菌K1108乙内酰脲酶产酶条件研究

研究了乙内酰脲酶产生菌节杆菌K1108的产酶条件。该菌乙内酰脲酶为诱导酶,存在于细胞内,乙内酰脲水解酶和N氨甲酰氨基酸水解酶是同时被诱导产生。最适诱导物为5苄基乙内酰脲,而5吲哚甲基乙内酰脲和5苯基乙内酰脲等不能诱导其酶的产生。筛选到一种安慰诱导物,诱导活性提高了2倍多。对产酶培养基进行了筛选和优化,在最适条件下,K1108产酶能力可达108U/mL。     

乙内酰脲类化合物的研究进展

乙内酰脲类化合物是一种五元杂环类化合物,具有多种的药理活性,且合成方法多样,由于首次从中药白附子中分离得到天然的乙内酰脲类化舍物,故对此类化合物作此综述,以便对乙内酰脲类化合物做进一步的研究。     

N-氨甲酰基氨基酸水解酶在毕赤酵母中的表达

N-氨甲酰氨基酸水解酶是乙内酰脲酶系的组成部分,催化N-氨甲酰氨基酸水解为相应氨基酸。节杆菌BT801的N-氨甲酰氨基酸水解酶是该菌乙内酰脲酶系中惟一具立体专一性的酶,也是整个反应体系的限速酶。通过PCR从携带乙内酰脲酶系完整操纵子的亚克隆质粒pUC18-169上扩增得到N-氨甲酰氨基酸水解酶基因(hyuC)片段,连接到载体pPIC3.5K上,经BglⅡ酶切线性化,通过PEG法转化导入毕赤酵母GS115感受态细胞,利用G418抗性筛选得到插入多拷贝目的基因的转化子。酶活性分析表明所得转化子具     

Arthrobacter K1108乙内酰脲酶转化产物的鉴定

用 Arthrobacter sp.K1 1 0 8的完整细胞为酶源 ,对 DL- 5 -苄基乙内酰脲进行了酶法转化 ,对转化产物进行了提取和精制 ,并通过理化分析和光谱分析进行了鉴定 ,证实所得产物确实为 L-苯丙氨酸 ,同时证实 K1 1 0 8的乙内酰脲酶是 L-选择性的     

一株乙内酰脲酶产生菌Arthrobacter K1108的筛选及鉴定

从沈阳市浑河地区污泥中分离得到了一株乙内酰脲酶产生菌 ,薄层色谱和氨基酸自动分析仪的分析结果表明 ,该菌的完整细胞可催化 5 -苄基乙内酰脲水解产生苯丙氨酸。对该菌进行了细菌分类学鉴定 ,确定该菌为节杆菌属的一个种 ,故命名为 Arthrobacter sp.K1 1 0 8     

Methanobrevibacter ruminantium as an indicator of domesticated-ruminant fecal pollution in surface waters

A PCR-based assay (Mrnif) targeting the nifH gene of Methanobrevibacter ruminantium was developed to detect fecal pollution from domesticated ruminants in environmental water samples. The assay produced the expected amplification product only when the reaction mixture contained DNA extracted from M. ruminantium culture, bovine (80%), sheep (100%), and goat (75%) feces, and water samples from a bovine waste lagoon (100%) and a creek contaminated with bovine lagoon waste (100%). The assay appears to be specific and sensitive and can distinguish between domesticated- and nondomesticated-ruminant fecal pollution in environmental samples.     

Hydantoinases and related enzymes as biocatalysts for the synthesis of unnatural chiral amino acids

A cascade of hydantoinase, N-carbamoylase and hydantoinracemase can be used for the production of natural and unnatural chiral D- and L-amino acids from chemically synthesized hydantoin derivatives. Potentially, 100% conversion and 100% optically pure amino acids can be obtained at the same time if racemic substrates are used. Recent research activities concentrate on newly isolated or improved enzymes and include directed evolution techniques, structure elucidation, studies of fusion proteins and the use of specially designed whole cell biocatalysts.     

Survival of Trichomonas gallinae in white-winged dove carcasses

Survival of Trichomonas gallinae was examined in white-winged dove (Zenaida asiatica) carcasses to assess whether birds that have been dead up to 8 hr can be sampled reliably for this protozoan. Carcasses of 100 T. gallinae-positive white-winged doves were separated into four groups of 25 birds, representing 2, 4, 6, and 8 hr post mortem sampling intervals and placed into an environmental chamber maintained at 27 C and 75% relative humidity. Live T. gallinae were isolated in 96, 100, 100, and 92% of the carcasses at each of the respective post mortem intervals. The experiment was repeated with another 100 carcasses of T. gallinae-positive white-winged doves placed in the environmental chamber, this time maintained at 27 C and 40% relative humidity. Live T. gallinae occurred in 96, 100, 96, and 100% of the carcasses at each of the respective post mortem intervals. Across both trials, the overall ability to detect positive birds from sampling carcasses up to 8 hrs post mortem was 97%. An a posteriori experiment was conducted in which 23 and 18 carcasses from the second trial were maintained in the environmental chamber at 27 C and 40% relative humidity and resampled at 24 and 48 hr post mortem, respectively. Live trichomonads were isolated from 91 and 44% of the carcasses at 24 and 48 hr, respectively. Results suggest live T. gallinae can be obtained from dove carcasses reliably up to 8 hr and possibly up to 24 hr after host death. The ability for T. gallinae to survive within this time interval can aid wildlife personnel in monitoring this protozoan at hunter check stations or obtaining samples from recently killed birds.     

A comparison of thick smears, QBC malaria, PCR and PATH falciparum malaria test trip in Plasmodium falciparum diagnosis.

Blood samples from 182 patients presenting at the out-patient clinic in Richard-Toll. Senegal were analysed by Thick smear microscopy, the QBC, PCR and the new dipstick PATH Malaria assay which detects the histidine rich protein II antigen of Plasmodium falciparum. Thick smear microscopy was used as the reference method. Sensitivity, specificity, predictive positive and negative values were 100%, 83.6%, 93.4% and 100% QBC respectively; 100%, 72.7%, 89.4% and 100% for PCR; 96%, 92.7%, 96.8% and 91% for the PATH assay. PATH assay failed to detect one positive sample with Plasmodium malariae. Assays were also compared with regard to the expense of equipment and reagents and speed and ease of use. The rapid PATH assay can be performed with minimal training and may be specially useful in areas where P. falciparum is the predominant malaria species, in epidemic malaria regions, and where skilled microscopy is not readily available.     

新的分离纯化青霉素酰化酶方法的研究

按0．6％(w／v)的比例将皂土加到青霉索酰化酶发酵上清液中,可将酶100％吸附,而吸附的蛋白质仅占发酵上清液中的10％左右。吸附时的pH和无机盐对酶的吸附影响不大。使用不同pH和种类的缓冲液洗涤皂土－酶复合物,不能将酶洗脱,但可洗脱15％左右吸附的杂蛋白。使用含10％以上的PEG和NaCl的磷酸缓冲液可将酶全部洗脱．酶纯化25倍,浓缩6倍左右。此法特点是简便,酶活力收率高,可在常温下操作,也可直接从未除菌体的发酵液中提取酶,具有工业应用价值。     

Fermentation of polysaccharides by Klebsielleae and other facultative bacilli.

Fermentations of 10 polysaccharides by species of the family Enterobacteriaceae were examined. Algin, guar, karaya, xanthan, and xylan were not fermented by any of the strains tested. Most of the activity was found in the tribe Klebsielleae. Klebsiella oxytoca fermented amylopectin (97% of the strains studied), carrageenan (100%), inulin (68%), polypectate (100%), and tragacanth (100%). Klebsiella pneumoniae fermented amylopectin (91%), carrageenan (100%), and tragacanth (86%). Carrageenan was also fermented by Enterobacter aerogenes (100%), Enterobacter agglomerans (63%), Enterobacter cloacae (95%), and Pectobacterium (38%). Pectobacterium shared polypectate fermentation (100%) with K. oxytoca. With one exception, Serratia strains were negative on all polysaccharides. These results, along with other evidence, indicate that (i) the genus Klebsiella is biochemically the most versatile genus of the tribe, (ii) because of its distinct characteristics, K. oxytoca warrants species designation separate from K. pneumoniae, and (iii) some food additives generally considered indigestible can be metabolized by a few species of facultative bacilli, whereas others appear to be resistant.     

A high-performance liquid chromatography procedure for recovering subnanomole amounts of protein from SDS-gel electroeluates for gas-phase sequence analysis

A high-performance liquid chromatographic procedure for recovering subnanomole amounts of protein from SDS/polyacrylamide gel electroeluates in a form suitable for gas-phase sequence analysis has been developed. By a judicious choice of reversed-phase column packing, proteins can be retained at high concentrations of n-propanol (90-100%) where sodium dodecylsulfate and acrylamide gel-related contaminants are washed through the column. Retained proteins can be recovered from the column in high yield (greater than 90%) by the simultaneous adding of an ion-pairing reagent into the mobile phase and elution with a gradient of decreasing n-propanol concentration (i.e. an 'inverse or negative gradient'). Furthermore, by using a steep gradient (e.g. 50%/min) at a low flow rate (20-200 microliters/min) the proteins can be recovered in less than 100 microliters and can be used for gas-phase sequence analysis without further manipulation. This procedure is independent of sodium dodecylsulfate concentration (up to 1.2% w/v) in sample loading volumes of up to 1.5 ml. Microbore columns (2.1 mm internal diameter) have been employed for recovering small amounts of protein (1-100 micrograms from electroeluates of protein-containing gel spots while conventional columns (4.6 mm internal diameter) were used for isolating larger amounts of protein (greater than 500 micrograms) from electroeluates of preparative gel bands. The general utility of this inverse-gradient high-performance liquid chromatography procedure has been demonstrated by its successful application in recovering a wide variety of proteins from sodium dodecylsulfate gel electroeluates in a form suitable for N-terminal sequence analysis in the 10-500 pmol range.     

Eliminating the diagnosis atypical squamous cells of undetermined significance: impact on the accuracy of the Papanicolaou test

OBJECTIVE: To assess eliminating the diagnosis "atypical squamous cells of undetermined significance" (ASCUS) from the Bethesda System for Reporting Cervical/Vaginal Cytological Diagnoses and analyze its impact on the sensitivity and positive predictive value of Pap smears. STUDY DESIGN: A total of 166 previously diagnosed ASCUS cases with follow-up biopsy results available were prospectively downgraded to within normal limits/benign cellular changes or upgraded to specific squamous intraepithelial lesions (SILs) or the malignant category. These review cytodiagnoses were compared with the histologic outcome. The impact on the sensitivity and positive predictive value of Pap smears was also assessed. RESULTS: Though there was a decrease in the sensitivity of the Pap smear from 100% to 76.3% for SIL overall and from 100% to 80% for high grade SIL (HSIL) alone, there was an improvement in the positive predictive value of diagnosing SIL from 46% to 85% and from 6% to 15% for HSIL alone. CONCLUSION: The ASCUS diagnosis can be minimized to a great extent, if not eliminated completely. The "ASCUS-favor reactive" group can be eliminated, while the diagnoses "ASCUS favor SIL" and "ASCUS-not otherwise specified" should be used sparingly.     

Sex estimation using the first cervical vertebra

The articular surfaces and vertebral foramen area of the first cervical vertebra are sexually dimorphic and can be used to sex complete or fragmentary specimens. Eight measurements were taken from the articular regions (superior and inferior) of 100 first cervical vertebrae from Terry collection specimens housed at the Smithsonian Institution. Seven regression and seven discriminant function equations were created that predict sex with 77–85% and 75–85% accuracy, respectively. In separate control tests, measurements from 100 first cervical vertebrae from Hamann-Todd collection individuals (Cleveland Museum of Natural History) and from 34 archaeological specimens were used with the Terry equations. The control samples were sexed with 60—85% accuracy. © 1995 Wiley-Liss, Inc.