抗青枯病型根际促生菌(PGPR)菌群构建及其生物防控机制

【目的】根际促生菌(plant growth promoting rhizobacteria, PGPR)防控青枯病效果不稳定是目前有益微生物生防应用的瓶颈问题,构建稳定高效拮抗青枯菌的PGPR菌群是生物防控的关键。【方法】以前期筛选到的8株PGPR菌株(112、114、Ba-S、TLZZ、LX4、LX7、Ps-S和VC110)和青枯菌(Ralstonia solanacearum, Rs)为研究对象,在前期获得烟草根系分泌物组成的基础上,采用限菌微系统和生态微孔板结合绿色荧光蛋白标记、定量聚合酶链式反应(quantitative polymerase chain reaction, qPCR)、断棒模型设计等方法,探究PGPR菌群对青枯菌入侵烟草根际的抵御机制,并在田间进行抗病、促生效果验证。【结果】LX4、Ba-S、LX7可以充分利用烟草根系分泌物中的氨基酸、糖类碳源抑制青枯菌生长,LX7和112在所有酸类碳源下均对青枯菌有抑制作用,最高抑菌率分别为40.12%(LX7+乳酸)和35.15%(112+柠檬酸)。Ps-S、112和VC110的基础生态位宽度(basal niche b...     

云南省烟植地青枯菌RS-22的分离及其拮抗菌的筛选和鉴定

【背景】由青枯劳尔氏菌(Ralstonia solanacearum)引起的烟草青枯病是一种重要土传病害,在我国南方烟区普遍发生。生物防控是针对烟草青枯病的一种有效防治措施,但是相关的研究报道还较少。【目的】分离云南省烟植地的青枯病原菌,筛选其拮抗菌并对其抑菌效果进行鉴定。【方法】采用平板稀释法从云南感病烟草中分离获得青枯菌,采用平板对峙法筛选青枯菌拮抗菌,筛选得到的拮抗菌通过16SrRNA基因测序比对确定菌种类型,并在实验室和大田鉴定其对青枯病的防治效果。【结果】从感病烟草茎中分离出一株强致病性青枯菌小种RS-22,该菌能侵染烟草和番茄并最终使植物死亡;筛选出12株RS-22拮抗菌,其中拮抗作用最强的是Y4;Y4被鉴定为一株解淀粉芽孢杆菌(Bacillus amyloliquefaciens),其菌体和分泌物都能抑制RS-22生长;Y4根部灌根处理能显著提高烟草和番茄对青枯菌RS-22的抗性,Y4处理能使感病烟草部分恢复正常,在云南文山州烟草种植大田施加Y4菌剂和菌剂有机肥混合物也能显著降低烟草青枯病的感病率。【结论】青枯菌RS-22具有广谱的致病性,筛选的拮抗菌Y4能显著抑制青枯菌生长,而且对青枯菌侵染植物有很好的防治效果。研究结果为进一步研究烟草青枯病的生物防控提供了新的理论依据。     

番茄青枯病拮抗菌的定向筛选及其抗病促生机制研究

[目的] 从抑病型番茄根际土壤中筛选青枯病的高效拮抗促生菌,阐明其防病促生机制。[方法] 以番茄青枯雷尔氏菌（Ralstonia solanacearum）为靶病原菌,采用平板抑菌圈法,筛选拮抗菌;通过BOX-PCR指纹图谱鉴定菌株多样性,以平板透明圈法评价其产酶活性,并针对抑菌能力强、产酶种类多的拮抗菌开展16S rRNA基因系统发育分析;通过温室试验评价拮抗菌的防病促生能力,并在此基础上通过实时荧光定量PCR研究生防细菌对番茄青枯病的防病促生机制。[结果] 从番茄根际土壤分离获得29株细菌,其中15株对青枯菌具有拮抗功能,进一步通过BOX-PCR指纹图谱、酶活分析获得4株具有潜在防治番茄青枯病、促进生长的功能菌（B2、B5、B20、B23）,通过16S rRNA系统发育分析鉴定B2拮抗菌为解淀粉芽孢杆菌（Bacillus amyloliquefaciens）,B5和B20拮抗菌为枯草芽孢杆菌（Bacillus subtilis）,B23拮抗菌为贝莱斯芽孢杆菌（Bacillus velezensis）;温室试验表明,B2、B5、B20、B23拮抗菌的抑病效果分别为35.59%、8.47%、32.20%、96.61%,并且均能显著增加番茄生物量和生理性状,如地上部鲜重、总叶绿素含量、地下部根尖数等。B2、B5、B23拮抗菌显著促进番茄株高和根长,B2、B20、B23拮抗菌显著增加茎粗;而B23拮抗菌显著增加根系分叉数;实时荧光定量分析表明,B2、B20、B23拮抗菌株可促进抗病相关功能基因PR1α、POD1的表达量,B2、B5、B23拮抗菌促进吲哚乙酸（IAA）信号通路应答关键基因ctd1的表达量,B2、B5、B20、B23拮抗菌均降低乙烯（ETH）信号通路应答关键基因ERF2的表达量。[结论] 本研究分离筛选获得4株对番茄青枯病具有显著防治效果以及促进番茄生长的PGPR菌株,可为定向筛选植物促生防病菌提供理论依据。     

豆蔻酸和棕榈酸诱导茄子根际拮抗菌与黄萎菌数量消长的关系

以气质联用仪(GC-MS)鉴定的嫁接茄与自根茄根系分泌物主要差异成分豆蔻酸和棕榈酸,利用它们的模拟物质研究了其对茄子根际土壤黄萎菌拮抗真菌与细菌数量和根际土壤黄萎菌数量的影响,明确了两模拟成分对茄子根际拮抗真菌和拮抗细菌的诱导作用及对黄萎菌数量抑制效果。同时,进一步分析了茄子根际拮抗真菌与细菌数总和与根际土壤黄萎菌数量的相关性。结果表明豆蔻酸和棕榈酸处理,茄子根际拮抗真菌和细菌数量均有所增加,在中高浓度下拮抗真菌和细菌数量增加显著。两物质处理下拮抗真菌与细菌数量在开花期和结果期增加显著。两物质对茄子根际黄萎菌数量的影响,整体来说,随两模拟组分浓度的增加土壤黄萎菌数量有所减少,各时期表现有所差异,在开花期两物质处理显著减少了黄萎菌数量。相关性分析表明豆蔻酸和棕榈酸处理下茄子根际拮抗真菌与细菌总量与根际黄萎菌数量呈显著的负相关性。说明嫁接通过改变茄子根系分泌物成分与对茄子根际土壤黄萎菌拮抗菌的诱导有一定关系。     

甲基营养型芽孢杆菌拮抗玉蜀黍尾孢菌、链格菌和灰葡萄孢菌及环脂肽分析

【目的】探究甲基营养型芽孢杆菌(Bacillus methylotrophicus)对植物病原菌玉蜀黍尾孢菌(Cercospora zeae-maydis Tehon et Daniels)、链格菌(Alternaria alternate)和灰葡萄孢菌(Botrytis cinerea)的拮抗作用并鉴定抗菌物质,为其病害防治提供优良生防菌。【方法】平板对峙法初筛和杯碟法筛选拮抗菌株;微生物形态学和16S rRNA基因鉴定拮抗菌株;薄层色谱(TLC)和编码基因分析鉴定抗菌物质;玉米田间生防试验评估拮抗菌对3种病原菌的防治效果。【结果】筛选到一株能够明显拮抗玉蜀黍尾孢菌、链格菌和灰葡萄孢菌的甲基营养型芽孢杆菌B-1841,抑制率分别为65.95%、71.04%和46.69%,抑菌物质为伊枯草菌素类脂肽。玉米田间生防试验表明,菌株B-1841对玉蜀黍尾孢菌、链格菌和灰葡萄孢菌感染的玉米病害均有防治效果,相对防效分别为60.25%、69.89%和45.21%。【结论】甲基营养型芽孢杆菌B-1841对玉蜀黍尾孢菌、链格菌和灰葡萄孢菌引起的病害有防治作用,在农作物真菌病害防治方面具有潜在应用价值。     

爱德华氏菌变异株C9605及对鳖的致病性研究

从患白板综合症的病鳖分离到一株细菌（C9605）,该菌为革兰氏阴性,直杆状,周生鞭毛。接触酶阳性,氧化酶阴性,还原硝酸盐,对多粘菌素不敏感,不利用柠檬酸盐和丙二酸盐作唯一碳源,不从甘露醇、蔗糖、海藻糖、L-阿拉伯糖产酸。根据这些特性,菌株可归于爱德华氏菌。但是该菌发酵木糖产酸,产生H₂S,耐青霉素,故鉴定为爱德华氏菌变异株（Edwardsiellaictalurivariationstrain）。人工感染实验证实,该菌株是鳖白板综合症的病原菌。     

■爱德华氏菌变异株C9605及对鳖的致病性研究

从患白板综合症的病鳖分离到一株细菌（C9605）,该菌为革兰氏阴性,直杆状,周生鞭毛。接触酶阳性,氧化酶阴性,还原硝酸盐,对多粘菌素不敏感,不利用柠檬酸盐和丙二酸盐作唯一碳源,不从甘露醇、蔗糖、海藻糖、L-阿拉伯糖产酸。根据这些特性,菌株可归于爱德华氏菌。但是该菌发酵木糖产酸,产生H2S,耐青霉素,故鉴定为爱德华氏菌变异株（Edwardsiellaictalurivariationstrain）。人工感染实验证实,该菌株是鳖白板综合症的病原菌。     

可同化阿拉伯糖的木糖还原酿酒酵母菌株构建

[目的] 以秸秆等木质纤维素类生物质为原料生产液体生物燃料乙醇,目前生产成本高,大规模工业化生产尚有较大难度。构建能同化阿拉伯糖进行木糖还原生产木糖醇的重组酿酒酵母菌株,以实现原料中全糖利用、生产高附加值产品,实现产品多元化。[方法] 首先,利用CRISPR/Cas9基因编辑技术依次向出发菌株中导入阿拉伯糖代谢途径和木糖还原酶基因,使菌株获得代谢阿拉伯糖和将木糖转化为木糖醇的能力;其次,通过适应性驯化的进化工程手段,提高重组菌株对阿拉伯糖的利用效率;最后,通过混合糖发酵验证重组菌株利用阿拉伯糖和还原木糖产木糖醇的能力。[结果] 通过导入植物乳杆菌的阿拉伯糖代谢途径,酿酒酵母菌株获得了较好的利用阿拉伯糖生长繁殖的能力;进一步导入假丝酵母的木糖还原酶基因后,重组菌株在葡萄糖作为辅助碳源条件下可高效还原木糖产木糖醇,但阿拉伯糖的利用能力下降。利用以阿拉伯糖为唯一碳源的培养基进行反复批次驯化,阿拉伯糖的利用能力得以恢复和提升,得到表型较好的重组菌株KAX3-2。该菌株在木糖（50 g/L）和阿拉伯糖（20 g/L）混合糖发酵条件下发酵72 h时,对阿拉伯糖和木糖利用率分别达到42.1%和65.9%,木糖醇的收率为64%。[结论] 本研究成功构建了一株能有效利用阿拉伯糖并能将木糖转化为木糖醇的重组酿酒酵母菌株KAX3-2,为后续构建、获得阿拉伯糖代谢能力更强、木糖醇积累效率更高菌株的工作奠定了基础。     

烟草青枯雷尔氏菌噬菌体资源的发掘

由青枯雷尔氏菌(Ralstonia solanacearum)引起的烟草青枯病是烟草种植过程中一种重要的细菌性病害。为了开展利用噬菌体防控烟草青枯病的研究,本研究以烟田产区的7株烟草青枯菌为宿主,从烟田土壤中分离到了14个对烟草青枯菌具有侵染性的烈性噬菌体,说明烟田土壤中普遍存在烟草青枯菌噬菌体。选取噬菌体?PB2和?PB34,电镜观察确定其具有十二面体的头部和粗短的尾部,属于肌尾噬菌体科。噬菌体的宿主谱分析显示,筛选到的噬菌体对分别从烟草、西红柿和花生分离的青枯菌株系的侵染性有所差异。本研究分离发掘的14个对烟草青枯菌侵染的噬菌体,为利用噬菌体防控烟草青枯病的生防策略研究提供了噬菌体资源。     

碳源对虫草菌产生几种胞外酶活性的影响

本实验研究分别以淀粉、果胶和纤维素为液体培养基中唯一碳源时,虫草菌所产相应诱导酶活性变化。通过分别以淀粉、果胶和CMC为唯一碳源的液体培养基培养虫草菌,检测培养过程中酶活性变化、残糖及总核苷量。结果表明:分别利用淀粉、果胶和CMC为唯一碳源,虫草菌均能生长并产生诱导酶。淀粉酶活力最高可达40 U/m L,CMC酶活力仅达到1.6 U/m L,果胶酶酶活力达到6.86 U/m L,淀粉酶活力比果胶酶酶活和纤维素酶中的CMC酶活力高很多,淀粉是较容易利用的碳源。淀粉、果胶和CMC培养虫草菌都会产生碱性物质。含淀粉较多的农业加工副产品、废弃物对虫草菌培养的贡献价值较高。     

一株番茄青枯病菌拮抗细菌的筛选、发酵条件优化及田间小区防效

[背景]番茄青枯病是由青枯劳尔氏菌(Ralstonia solanacearum)引起的一种土传细菌性病害,该病原菌严重影响番茄的生产。[目的]筛选番茄青枯病的生防细菌,并将其用于病害防治。[方法]采用抑菌圈法、琼脂扩散法从湖南衡阳青枯病发病田的健康番茄根际土壤筛选对青枯劳尔氏菌具有较强拮抗能力的菌株,通过形态学观察、生理生化试验、16S rRNA基因和gyrA基因测序分析确定其分类地位;以单因素试验和正交试验对发酵条件进行优化;通过田间小区试验初探其防效。[结果]筛选的菌株TR-1被初步鉴定为贝莱斯芽孢杆菌(Bacillus velezensislezensis);菌株TR-1最佳培养基配方(g/L):可溶性淀粉20.0,大豆蛋白胨10.0,磷酸氢二钾5.0;最佳发酵条件:pH6.0-7.0,温度30-33℃,摇床转速160 r/min,发酵时长48 h,优化后TR-1无菌发酵上清液对青枯菌抑菌圈直径达2.95 cm,约为优化前的2倍;其田间小区防效为60.30%。[结论]通过对菌株TR-1发酵条件进行优化可大大提升其发酵液抑菌效果,而且菌株TR-1在田间小区试验中对番茄青枯病防效优...     

Effect of Carbon Source on the Antimicrobial Activity of the Air Flora

Summary In an attempt to screen for air flora producing new potent antimicrobial substances, Bacillus megaterium NB-3, Bacillus cereus NB-4, Bacillus cereus NB-5, Bacillus subtilis NB-6 and Bacillus circulans NB-7, were isolated and were found to be antagonistic to bacteria and/or fungi. Production of antimicrobial substances by the bacterial strains was greatly influenced by variation of carbon sources. Glycerol strongly enhanced the antimicrobial activity of strains NB-3 and NB-6, whereas glucose increased the antimicrobial activity of strains NB-4 and NB-5. The maximum antibiotic yield of NB-7 was achieved with fructose as a carbon source. Starch (Bacillus megaterium NB-3), maltose (Bacillus cereus NB-5), glycerol (Bacillus circulans NB-7), arabinose, ribose (Bacillus cereus NB-4) and arabinose, fructose, glucose, ribose and sucrose (Bacillus subtilis NB-6) repressed the production of antimicrobial substances by the respective bacterial strains.     

Effect of root exudates on the spore germiantion of rhizosphere and rhizoplane mycoflora of chilli (Capsicum annuum L.) cultivars

Summary From root exudates of three cultivars of chilli (Capsicum annuum L.) 12 amino acids and 7 sugars were detected. Methionine, d-1- phenylalanine, citrulline and d-xylose were detected only from the root exudates of resdistant cultivars. The root exudates of resistant variety inhibited spore germination of the pathogen (Fusarium oxysporum f. sp.capsici), but that of susceptible variety enhanced spore germiantion of the same. Spore germiantion of antagonistic fungi (Trichderma viride andAspergillus sydowi) was also influenced by the root exudates of resistant and susceptible varieties, but the influence was different.Spore germiantion of a number of rhizosphere fungi was studied and in general root exudate of susceptible cultivar enhanced spore germiantion of majority of fungi, but spore germination of antagonistic fungi against the pathogen was inhibited. However, root exudate of resistant cultivar stimulated spore germination of antagonistic fungi.     

健康与感染青枯病烟株根际土壤与茎秆细菌群落结构与多样性

【目的】了解健康烟株与感染青枯病烟株在根际土壤、茎杆发病部位、茎杆病健交界部位以及未发病茎杆的细菌群落结构与多样性。【方法】分别对土壤与茎杆样品中细菌的16S rRNA基因V3-V4区进行扩增,采用Illumina MiSeq测序技术对扩增片段进行高通量测序,然后对健康烟株与感染青枯病烟株不同部位细菌群落结构与多样性进行分析。【结果】感染青枯病烟株发病茎杆及根际土壤的细菌群落多样性高于健康烟株茎杆及其根际土壤样品,病健交界茎杆样品细菌群落多样性低于健康烟株。变形菌门(Proteobacteria)在所有样品中均为优势菌门;所有烟株根际土壤的优势菌门为拟杆菌门(Bacteroidetes)、酸杆菌门(Acidobacteria)、放线菌门(Actinobacteria)和绿弯菌门(Chloroflexi);健康烟株茎杆部位的优势菌门为蓝细菌门(Cyanobacteria);感染青枯病烟株发病茎杆和病健交界茎杆部位的优势菌门为蓝细菌门(Cyanobacteria)和厚壁菌门(Firmicutes)。所有根际土壤样品的优势菌属为劳尔氏菌属(Ralstonia)、假单胞菌属(Pseudomonas)、鞘脂单胞菌属(Sphingomonas)、黄杆菌属(Flavobacterium)和代尔夫特菌属(Delftia),而感染青枯病烟株根际土壤的劳尔氏菌属(Ralstonia)和假单胞菌属(Pseudomonas)相对丰度显著高于健康烟株根际土壤,鞘脂单胞菌属相对丰度显著低于健康烟株根际土壤。烟株茎杆的优势菌属为劳尔氏菌属和假单胞菌属等。感染青枯病烟株病健交界茎杆中劳尔氏菌属、肠杆菌属(Enterobacter)和泛菌属(Pantoea)相对丰度显著低于健康烟株样品。【结论】健康与感染青枯病烟株茎杆样品细菌群落的丰富度和多样性明显低于相应的根际土壤样品。较健康烟株而言,感染青枯病烟株根际土壤和茎杆样品细菌群落丰富度和多样性均表现出不同程度地增加,且根际土壤细菌群落结构变化较茎杆样品明显,而病健交界茎杆样品细菌群落丰富度和多样性降低。烟草青枯病为典型土传病害,其病原茄科劳尔氏菌尽管能在烟株维管束中蔓延扩增,但主要还是分布于土壤中;它的存在似乎对土壤细菌群落的影响大于茎杆样品的。该研究结果提示对于青枯病的防治不能局限于烟株本身,田间土壤也应加大防治力度。     

丛枝菌根真菌响应桉树茄科雷尔氏菌侵染进程基因的筛选与鉴定

【背景】桉树(Eucalyptus)青枯病危害严重,丛枝菌根真菌(arbuscular mycorrhizal fungi,AMF)与桉树共生影响桉树对青枯病的抗性,而AMF响应桉树青枯菌侵染的机制仍不清楚。【目的】探索AMF响应桉树茄科雷尔氏菌(Ralstonia solanacearum)的侵染机制。【方法】以非菌根化和异形根孢囊霉(Rhizophagus irregularis)菌根化巨桉(Eucalyptus grandis)分别受茄科雷尔氏菌侵染0、24、48和96 h接种后(hour post-inoculated, hpi)的根系组织为研究对象,基于转录组测序筛选和鉴定菌根化巨桉根系中异形根孢囊霉响应茄科雷尔氏菌侵染的基因信息。【结果】与对应非菌根化桉树受茄科雷尔氏菌侵染的时间点相比,菌根化桉树中异形根孢囊霉响应青枯菌侵染显著差异表达基因为3 382–5 989个,随青枯侵染时间进程的增加,异形根孢囊霉特异性响应茄科雷尔氏菌侵染差异表达基因数量逐渐增多。茄科雷尔氏菌侵染24 hpi时,异形根孢囊霉显著富集共生体生长、孢子形成和凋亡信号通路、铁载体等相关基因;茄科雷尔氏菌侵...     

Characterization of the interaction between the bacterial wilt pathogen Ralstonia solanacearum and the model legume plant Medicago truncatula

The soilborne pathogen Ralstonia solanacearum is the causal agent of bacterial wilt and attacks more than 200 plant species, including some legumes and the model legume plant Medicago truncatula. We have demonstrated that M. truncatula accessions Jemalong A17 and F83005.5 are susceptible to R. solanacearum and, by screening 28 R. solanacearum strains on the two M. truncatula lines, differential interactions were identified. R. solanacearum GMI1000 infected Jemalong A17 line, and disease symptoms were dependent upon functional hrp genes. An in vitro root inoculation method was employed to demonstrate that R. solanacearum colonized M. truncatula via the xylem and intercellular spaces. R. solanacearum multiplication was restricted by a factor greater than 1 x 10(5) in the resistant line F83005.5 compared with susceptible Jemalong A17. Genetic analysis of recombinant inbred lines from a cross between Jemalong A17 and F83005.5 revealed the presence of major quantitative trait loci for bacterial wilt resistance located on chromosome 5. The results indicate that the root pathosystem for M. truncatula will provide useful traits for molecular analyses of disease and resistance in this model plant species.     

Pseudomonads: major antagonistic endophytic bacteria to suppress bacterial wilt pathogen, <Emphasis Type="Italic">Ralstonia solanacearum</Emphasis> in the eggplant (<Emphasis Type="Italic">Solanum melongena</Emphasis> L.)

Endophytic bacteria of eggplant, cucumber and groundnut were isolated from different locations of Goa, India. Based on in vitro screening, 28 bacterial isolates which effectively inhibited Ralstonia solanacearum, a bacterial wilt pathogen of the eggplant were characterized and identified. More than 50% of these isolates were Pseudomonas fluorescens in which a vast degree of variability was found to exist when biochemical characteristics were compared. In greenhouse experiments, the plants treated with Pseudomonas isolates (EB9, EB67), Enterobacter isolates (EB44, EB89) and Bacillus isolates (EC4, EC13) reduced the wilt incidence by more than 70%. All the selected isolates reduced damping off by more than 50% and improved the growth of seedlings in the nursery stage. Most of the selected antagonists produced an antibiotic, DAPG, which inhibited R. solanacearum under in vitro conditions and might have been responsible for reduced wilt incidence under in vivo conditions. Also production of siderophores and IAA in the culture medium by the antagonists was recorded, which could be involved in biocontrol and growth promotion in crop plants. From our study we conclude that Pseudomonas is the major antagonistic endophytic bacteria from eggplants which have the potential to be used as a biocontrol agent as well as plant growth-promoting rhizobacteria. Large scale field evaluation and detailed knowledge on antagonistic mechanism could provide an effective biocontrol solution for bacterial wilt of solanaceous crops.     

Kinetics of metal toxicity in plant roots and its effects on root morphology

Aims

We evaluated the efficacy of biochar application for suppressing bacterial wilt of tomato and identified the potential underlying mechanisms involved in the disease control.

Methods

We measured the impact of two different sized biochar (53–120 μm and 380–830 μm) on bacterial wilt incidence in a greenhouse experiment. The efficiency of different sized biochar for the adsorption of tomato root exudates and the pathogen was further examined in vitro. We also quantified the effects of biochar and tomato root exudates on two pathogen virulence factors, chemotaxis, swarming motility and examined the effect of biochar on pathogen root colonization.

Results

Fine biochar application (3%; w:w) significantly decreased the bacterial wilt incidence by 19.9%. Biochar with different particle size had similar adsorption capacity for root exudates, while fine biochar was efficient (91%) in pathogen adsorption. Root exudates and fine biochar increased the chemotaxis ability of pathogen, while fine biochar reduced pathogen swarming motility and rhizosphere colonization.

Conclusions

Application of fine biochar can significantly decreased bacterial wilt incidence. This was mechanistically explained by biochar ability to 1) adsorb pathogen directly and indirectly via adsorption of root exudates (based on pathogen chemotaxis) and to 2) directly suppress pathogen swarming motility and subsequent root colonization.