cDNA sequence analysis of ribosomal protein S13 gene in Plutella xylostella （Lepidoptera： Plutellidae）

Ribosomal protein S 13 gene has been cloned and analyzed in many organisms,but there are few documents relating to insects. In this communication, the full-length cDNA sequence of ribosomal protein S 13 gene in the diamondback moth, Plutella xylostella(Lepidoptera: Plutellidae), was determined by using PCR amplification technique. The features of the ribosomal protein S 13 gene sequence were analyzed and the deduced amino acids sequence was compared with those from other insects. The results of multi-alignment of the amino acid sequences between the diamondback moth and other insect species revealed that this gene sequence is highly conserved in insects. Based on maximum likelihood method, a phylogenetic tree was constructed from 10 different species using PHYLIP software. It showed that nematode is one separate lineage and the five insect speciesbe long to another lineage, whereas those species higher than insects form the third one. The pattern of this phylogenetic tree evidently represented the evolution of different species.     

In vitro transient expression system of latex C-serum was used for analysis of hevein promoter in response to abscisic acid in Hevea brasiliensis

Hevein has been found to be an essential element in coagulation of rubber particles in latex of rubber trees. In a previous study, we cloned a 1 241-bp fragment of a 5＇ upstream region of the hevein gene by genome walking. This fragment was analyzed by a 5＇ end nested deletion method in the present study, fused with a uidA （gus） gene to produce a series of tested constructs, which were transferred into C-serum of latex and the Gus activities were detected. Results showed that the fragment from -749 to -292 was sufficient for expression of gus gene in latex, and the fragment from -292 to -168 was crucial in response to abscisic acid inducement. In a transient transgenic test of rubber leaf with particle bombardment, construct Hev749 conferred gus-specific expression in veins, in which the latex tubes mainly distributed. This implies that the fragment from -749 to -292 was laticiferous-specific.     

The complete mitochondrial genome of the Keeled box turtle Pyxidea mouhotii and phylogenetic analysis of major turtle groups

The complete mitochondrial genome （16,837 bp） from the Keeled box turtle （Pyxidea mouhotii） was determined. The genome content, gene order, and base composition conformed to the consensus vertebrate type mtDNA. However, a remarkable feature was found in this molecule： a large number of （ATTATATC） n direct tandem repeats followed by （TA） n microsatellite at the 3＇ end of the control region （D-loop）, which might be useful as molecular markers for studying population genetics and helpful for species identification and conservation. Besides, to review phylogenetic relationships among major turtle lineages, maximum-likelihood （ML） and Bayesian （BI） analyses were conducted based on concatenated sequences of 13 protein-coding genes from 16 taxa. The resultant ML and BI analyses showed homological topologies, which only differed on the exact placement of Platysternon. Nevertheless, the results strongly supported that 1） Pyxidea mouhotii and Cuora aurocapitata formed a monophyletic clade, whereas Cyclemys atripons was not closer to the Pyxidea-Cuora than to Chinemys reevesii, suggesting that Cyclemys and the Cuora group （containing Pyxidea） may have originated from two ancestors; 2） the Geoemydidae with Testudinidae was a sister group rather than with the Emydidae.     

Phylogenetic relationships of Cyprinidae (Teleostei: Cypriniformes) inferred from the partial S6K1 gene sequences and implication of indel sites in intron 1

The family Cyprinidae is widely distributed in East Asia, and has the important phylogenetic signifi- cance in the fish evolution. In this study, the 5′ end partial sequences (containing exon 1, exon 2 and indel 1) of S6K1 gene were obtained from 30 representative species in Cyprinidae and outgroup using PCR amplification and sequencing. The phylogenetic relationships of Cyprinidae were reconstructed with neighbor joining (NJ), maximum parsimony (MP), maximum likelihood (ML), and Bayesian meth- ods. Myxocyprinus asiaticus (Catostomidae) was assigned to the outgroup taxon. Similar phylogenetic relationships within the family Cyprinidae were achieved with the four analyses. Leuciscini and Barbini were monophyletic lineages respectively with the high nodal supports. Leuciscini comprises Hy- pophthalmichthyinae, Xenocyprinae, Cultrinae, Gobioninae, Acheilognathinae and East Asian species of Leuciscinae and Danioninae. Monophyly of East Asian clade was supported with high nodal support. Barbini comprises Schizothoracinae, Barbinae, Cyprininae and Labeoninae. The monophyletic lineage consisting of Danio rerio, D. myersi, and Rasbora trilineata was basal in the tree. In addition, the large fragment indels in intron 1 were analyzed to improve the understanding of Cyprinidae relationships. The results showed that the large fragment indels were correlated with the relations among species. Some conserved regions in intron 1 were thought to be involved in the functional regulation. However, no correlation was found between sequence variations and species characteristic size.     

A novel gene——samfR involved in early stage of Streptomyces ansochromogenes differentiation

A 4.6 kb DNA fragment was cloned from the DNA library of Streptomyces ansochromogenes using a partial DNA fragment located in the downstream of promoter-P_(TH4) as probe. The experiments revealed that this DNA fragment consists of saw D gene and a 1.4 kb Pvu Ⅱ fragment which can accelerate mycelium formation of S. ansochromogerms. The nucleofide sequence of 1.4 kb DNA fragment was determined and analysed; the result indicated that the fragment contains one complete open reading frame (ORF) which encodes a protein with 213 amino acids, and this gene was desiguated as samfR. The deduced protein has 36% amino acid identities and 52% amino acid similarities in comparison with that encoded by hppR gene, which is involved in the regulation of catabolism for 3-(3-hydroxyphenyl) propionate (3HPP) in Rhodococcus globerulus. The function of samfR gene was studied using strategy of gene disruption, and the resulting samfR mutant failed to form aerial hyphae and spores, its development and differentiation stopped     

Changes of 5＇ Terminal Nucleotides of PCR Primers Causing Variable T-A Cloning Efficiency

T-A cloning takes advantage of the unpaired adenosyl residue added to the 3＇ terminus of amplified DNAs by Taq and other thermostable DNA polymerase and uses a Ilnearlzed plasmld vector with a protruding 3＇ thymldylate residue at each of Its 3＇ termini to clone polymerase chain reaction （PCR）-derived DNA fragments. It Is a simple, reliable, and efficient Ilgatlon-dependent cloning method for PCR products, but the drawback of variable cloning efficiency occurs during application. In the present work, the relationship between variable T-A cloning efficiency and the different 5＇ end nucleotlde base of primers used In PCR amplification was studied. The results showed that different cloning efficiency was obtained with different primer pairs containing A, T, C and G at the 5＇ terminus respectively. The data shows that when the 5＇ end base of primer pair was adenosyl, more white colonies could be obtained In cloning the corresponding PCR product In comparison with other bases. And the least white colonies were formed when using the primer pair with 5＇ cytldylate end. The gluanylate end primers resulted In almost the same cloning efficiency In the white colonies amount as the thymldylate end primer did, and this efficiency was much lower than that of adenosyl end primers. This presumably is a consequence of variability In 3＇dA addition to PCR products mediated by Taq polymerase. Our results offer instructions for primer design for researchers who choose T-A cloning to clone PCR products.     

What is the optimal number of leaves when measuring leaf area of tree species in a forest community?北大核心CSCD

Aims Leaf size, as one of the easier measured plant morphological traits, reflects response and adaptation of plants to environment and indicates functions and processes of ecosystem. When measuring leaf size (the leaf area, LA) on the field, the common accepted practice considers that the number of leaves picked off is often 10–20. However, what is the optimal number of leaves remains unknown. In this study, we attempt to determine how many leaves should be investigated when the leaf size of a tree is measured. Methods This study selected two dominant tree species (Schima superba, Ss and Liquidambar formosana, Lf) from a broadleaved evergreen and deciduous mixed forest in Jinhua Mountain of Zhejiang Province, eastern China. On the basis of sampling (>2 500 leaves for each tree) in five classes of the diameter of breast height (DBH) of tree species and at six directions for each individual, variations of LA in the two tree species are statistically analyzed. The optimal number of leaves, which can mostly represent the common leaf size feature, is further investigated. Important findings Mean LA of the evergreen tree Ss was smaller than that of the deciduous tree Lf. The former was (41.60 10.88) cm2 (16.74–100.80 cm2) and the latter was (57.65 19.35) cm2 (11.31–129.51 cm2). LA of Lf was significantly related to the DBH, but LA of Ss was not. LA of both trees in the middle DBH class (15–20 cm) was not significantly different from their means. LA of two trees have no significant correlations with the sampling directions, but LA at the east, west and bottom had no significant relationships with their means. Considering the representativeness and practicality in the field sampling, the priority of selecting leaves can target the bottom direction of middle diameter mature trees. Random sampling analysis indicated that, the optimal number of leaves for tree LA measurement is species specific. The optimal number of leaves for Ss is 40 and for Lf is at least 170, respectively. Therefore, when measuring leaf area in a forest community, the optimal sampling number of leaves should not be limited to 10–20 leaves. Under sufficient labor, material and time, more leaves should be measured. © Chinese Journal of Plant Ecology.     

Functional properties of a chitinase promoter from cabbage （Brassica oleracea var.capitata）

The 5‘-region of the chitinase gene cabch29,derived from Brassica oleracea var.capitata,has been sequenced and analyzed for cis-acting elements important in controlling gene expression in transgenic tobacco plants.Different 5‘-deletion fragments were linked to reporter gene β-glucuronidase (GUS) as translational fusions,and the expression of these chimeric genes was analyzed in vegetative organs and tissues.Sequences up to-651 showed some basal GUS activity with nearly equal levels in wounded and intact tissues.The addition of further upstream sequences(-651 to-1284) enhanced expression level,and the expression driven by this fragment was inducible by a factor of two to three-fold by wounding.Histochemical analysis of different tissue from transgenic plants that contain cabch29 promoter-gus fusion gene demonstrated woundinducible and tissue-specific cabch29 promoter activity in plants containing the 1308 base pair fragment.The location of GUS activity appears to be cell-specific,being highest in vascular cells and epidermal cells of stem,leaf and roots.Meanwhile,the temporal and spatial expression of cabch29-GUS fusion gene has been investigated.Among the different vegetative organs,a high level of GUS activity was observed in stem and a moderate one in roots;whereas,wounding stress led to a high level of GUS in stem and moderate one in leaf.     

JINKENITES——A STRANGE FOSSIL FROM EARLIEST CAMBRIAN IN W. HUBEI

A strange fossil described and illustrated in the present paper was collected by the writer in 1978 from the Huangshandong Member of the Lower Cambrian Tongying Formation in western Hubei. The material was preserved in greyish brown phosphoritic dolomites in association with elements of the Yangtze Micromolluscan Fauna, such as Tchangsichiton notabilus Yu and Sinuconus clypeus, Yu of Class Polyplacophora; Yangtzemerisma rarum Yu and Y.? cancellatum Yu of Class Merismoconchia; Yangtzeconus priscus Yu, Huangshandongoconus pileus Yu, Obtusoconus paucicostatus Yu, O. rostriptutea (Qian) and Spatuloconus rudis Yu of Class Monoplacophora; Bemella simplex Yu, Latouchlla of. memmorabilis Missarzhevsky, L. sanxiaesis Yu and L. lauta Yu of Class uncertain; Archaeospira ornata Yu, A. imbricata Yu and Cambrospira sinensis Yu of Class Gastropoda; Heraultipegma yunnanense He et Yang of Class Rostroconcbia: hyolithids and some other uncertain skeletal fossils. Although the systematic position of this peculiar fossil is unknown at present, it is inferred that this genus may be one of the typical primitive animal groups based on the characters of the shell and the spe cial spines. The shell is bilaterally symmetrical, elliptical in apical view; the dorsal side is roundly convex with three different forms of dorsal spines and several pairs of marginal spines on the anterior margin. Judged from the general morphological characters of the bilaterally symmetrical shell, these lower animals, generally speaking, have adapted themselves readily to different circumstances, and reduced resistance to any directional movement necessary for varied physiological activities. As to the function of the shell’s characteristics, the narrowly rounded side may serve as the anterior. Such a model of the body helps these animals go on with their benthonic creeping or swimming life. On the other hand, the dorsal spines are different from each other in shape, size, mode of arrangement and in number; especially, the end of the hook-shaped spines is generally curved outward, while the geniculate spines are oblique outward, and curved posteriorly all of a sudden. These structures of mechanism also provide us with the evidence that the narrowly rounded side serves as the anterior, while the opposite end as the posterior.It is of particular interest that this genus is somewhat similar to Phylum Mollusca, especially to the tryblidiids of Class Monoplacophora, in some morphological characters, such as: 1) the bilateral symmetry of the shell, 2) the outline elliptical in apical view and cap shaped in lateral view and 3) the dorsal side generally roundly convex. After careful study, it has been found that since this genus is strikingly different from monoplacopharans, may be it belongs to another interesting group of skeletal fossils. The reasons for this are: 1) in the former, there are many pairs of marginal spines on the anterior margin, while in monoplacophorans, no marginal spines can be seen; and 2) in this genus, the sculptures are different from each other in different areas, not only in shape and number, but also in the mode of arrangement, whereas in monoplacophorans, they are identical with each other in the same type and shape. Judged from the different forms of dorsal sculptures, this genus is comparatively similar to such uncertain shelly fossils as Lepidites Zhong, 1977 emend. Yu, 1987 and Xiadongoconus Yu, 1979 from the same horizon in the Yangtze Region of China, but differs from the latter two genera in the presence of marginal spines on the anterior margin. In addition, this new genus also differs from brachiopods and other skeletal fossils in the peculiar type of the shell. According to the above comparison, this genus is entirely different from all the classes of Phylum Mollusca, possibly representing another interesting group of skeletal fossils. It is impossible to determine the exact taxonomic position of this genus until more materials are available.     

Phylogenetic analysis of the mitochondrial cytochrome c oxidase subunit 1 gene from 13 sipunculan genera: intra- and interphylum relationships

Abstract. Sipunculans are a phylum of non-segmented, marine worms. Although they are well characterized morphologically, relationships within the phylum and the relationship of Sipuncula to other spiralian phyla have been strongly debated. I analyzed representatives of 13 of 17 described genera using a 654-bp fragment of the mitochondrial gene, cytochrome c oxidase subunit I, to construct the first intraphylum phylogenetic hypothesis for sipunculans based on molecular sequence data. Within the phylum, tree topologies are loosely congruent with a previously published morphological analysis, except that the monotypic genus Phascolopsis occurred within the Golfingiaformes as a sister group to, or nested within, the Themistidae. Phylogenetic analyses, including 30 sequences from additional invertebrate taxa, suggest that sipunculans are most closely related to the Annelida (including Echiura). A previously proposed sipunculan-molluscan relationship is not supported. While not universally accepted, this hypothesis is consistent with other recent and past data on phylum-level relationships.     

Morphology,molecules, and the phylogenetics of cetaceans

Recent phylogenetic analyses of cetacean relationships based on DNA sequence data have challenged the traditional view that baleen whales (Mysticeti) and toothed whales (Odontoceti) are each monophyletic, arguing instead that baleen whales are the sister group of the odontocete family Physeteridae (sperm whales). We reexamined this issue in light of a morphological data set composed of 207 characters and molecular data sets of published 12S, 16S, and cytochrome b mitochondrial DNA sequences. We reach four primary conclusions: (1) Our morphological data set strongly supports the traditional view of odontocete monophyly; (2) the unrooted molecular and morphological trees are very similar, and most of the conflict results from alternative rooting positions; (3) the rooting position of the molecular tree is sensitive to choice of artiodactyls outgroup taxa and the treatment of two small but ambiguously aligned regions of the 12S and 16S sequences, whereas the morphological root is strongly supported; and (4) combined analyses of the morphological and molecular data provide a well-supported phylogenetic estimate consistent with that based on the morphological data alone (and the traditional view of toothed-whale monophyly) but with increased bootstrap support at nearly every node of the tree.     

Phylogeny of the Mexican coastal leopard frogs of the Rana berlandieri group based on mtDNA sequences

Phylogenetic relationships among specimens from 25 different locations for the six Mexican coastal leopard frog species of the Rana berlandieri species group were investigated using 797 bp of the mitochondrial 12S rDNA gene. Relationships among the haplotypes obtained were recovered using maximum parsimony and Bayesian analyses. Most of the clades recovered by both tree building methods are strongly supported, but conflicting clades recovered by each analysis are generally poorly supported. Both analyses reject the previously proposed subgroupings of the R. berlandieri species group. Based on the strongly supported relationships, genetic differentiation, and geographic distribution of the haplotypes examined, nine independent lineages appear to comprise the group of study. However, confirmation of the new proposed lineages will require further analyses based on other genetic markers and additional samples that cover their entire geographic distribution. Concordance was noted between Miocene-Pliocene geological and climatic events in Mexico and the relationships recovered among the lineages proposed and their geographic distribution.     

Molecular phylogeny of the Monotropoideae (Ericaceae) with a note on the placement of the Pyroloideae

Mycotrophism occurs in two ericaceous subfamilies, the Monotropoideae and the Pyroloideae. However, three aspects of the evolution of these subfamilies remain equivocal; 1) morphological, biochemical, and molecular analyses have failed to establish that the Monotropoideae is monophylectic; 2) the relationships among members of the Monotropoideae remain unresolved; 3) it is unclear whether the Pyroloideae should be included as a subfamily within the Ericaceae or treated as a separate family. To address these topics a phylogeny was constructed using a portion of the 28S ribosomal RNA gene from 22 members of the Ericaceae. Results indicate that the present Monotropoideae is polyphyletic; one species, Monotropsis ordata, is more closely related to members of the Vaccinioideae than to the rest of the Monotropoideae. This arrangement is supported by consideration of mycorrhizal type, consequently multiple origins of mycotrophic parasitism must be assumed. The relationships depicted within the Monotropoideae are nearly congruent with those depicted in Copeland's (1941) phylogeny, and morphological or biochemical characters are identified which support the relationships depicted by the molecular tree which do not agree with the morphological tree. In addition, the data indicate, although not strongly, that the Pyroloideae should be included within the Ericaceae.     

绣球属(Hydrangea L.)植物分子系统学及系统发育分析

该研究基于对绣球属(Hydrangea L.)的大尺度取样,选取国内外61种绣球属和近缘属植物,分别基于核基因片段(ITS)和叶绿体基因片段(rbcL,trnL-F,atpB)重建了绣球属及其近缘种属的系统发育关系。结果表明:(1)核基因与叶绿体基因树之间在树形上没有明显的冲突,进而基于核基因和叶绿体基因联合数据重建了绣球属及其近缘种属的系统发育关系。(2)基于联合数据构建的系统树确认了2个大分支,并得到了果实顶端截平与否这一形态学证据的强力支持;每个大分枝又分为4个类群,共确定了8个类群。部分类群也得到了广义宏观形态性状的支持,如第1类群得到了叶形、花粉以及种子形态的支持。因此,该系统发育关系的重建对于全面理解绣球属及其近缘种属的演化关系具有重要的启发。     

Gene trees, species trees, and morphology converge on a similar phylogeny of living gars (Actinopterygii: Holostei: Lepisosteidae), an ancient clade of ray-finned fishes

Extant gars represent the remaining members of a formerly diverse assemblage of ancient ray-finned fishes and have been the subject of multiple phylogenetic analyses using morphological data. Here, we present the first hypothesis of phylogenetic relationships among living gar species based on molecular data, through the examination of gene tree heterogeneity and coalescent species tree analyses of a portion of one mitochondrial (COI) and seven nuclear (ENC1, myh6, plagl2, S7 ribosomal protein intron 1, sreb2, tbr1, and zic1) genes. Individual gene trees displayed varying degrees of resolution with regards to species-level relationships, and the gene trees inferred from COI and the S7 intron were the only two that were completely resolved. Coalescent species tree analyses of nuclear genes resulted in a well-resolved and strongly supported phylogenetic tree of living gar species, for which Bayesian posterior node support was further improved by the inclusion of the mitochondrial gene. Species-level relationships among gars inferred from our molecular data set were highly congruent with previously published morphological phylogenies, with the exception of the placement of two species, Lepisosteus osseus and L. platostomus. Re-examination of the character coding used by previous authors provided partial resolution of this topological discordance, resulting in broad concordance in the phylogenies inferred from individual genes, the coalescent species tree analysis, and morphology. The completely resolved phylogeny inferred from the molecular data set with strong Bayesian posterior support at all nodes provided insights into the potential for introgressive hybridization and patterns of allopatric speciation in the evolutionary history of living gars, as well as a solid foundation for future examinations of functional diversification and evolutionary stasis in a "living fossil" lineage.     

Close relationship between Asterina and Solasteridae (Asteroidea) supported by both nuclear and mitochondrial gene molecular phylogenies

Phylogenetic relationships among asteroids remain to be extremely controversial in spite of many morphological and molecular studies have been applied to this issue. In the present study, especially focusing on resolving the relationship of Asterina and Solasteridae, we reconstructed the molecular phylogenetic tree of asteroids using nuclear 18S rDNA. A close relationship between Asterina and Solasteridae, which has been suggested from analyses of mitochondrial 12S rDNA and 16S rDNA, is supported here by the nuclear 18S rDNA dataset. The support is even stronger when the sequences of mitochondrial rDNAs and nuclear 18S rDNA are combined as a total dataset. The independent support from both nuclear 18S rDNA and mitochondrial rDNAs strongly argues for a close relationship between the Asterina and Solasteridae.     

Phylogeny of the Oriental Drosophila melanogaster species group: a multilocus reconstruction

The melanogaster species group of Drosophila (subgenus Sophophora) has long been a favored model for evolutionary studies because of its morphological and ecological diversity and wide geographic distribution. However, phylogenetic relationships among species and subgroups within this lineage are not well understood. We reconstructed the phylogeny of 17 species representing 7 "oriental" species subgroups, which are especially closely related to D. melanogaster. We used DNA sequences of four nuclear and two mitochondrial loci in an attempt to obtain the best possible estimate of species phylogeny and to assess the extent and sources of remaining uncertainties. Comparison of trees derived from single-gene data sets allowed us to identify several strongly supported clades, which were also consistently seen in combined analyses. The relationships among these clades are less certain. The combined data set contains data partitions that are incongruent with each other. Trees reconstructed from the combined data set and from internally homogenous data sets consisting of three or four genes each differ at several deep nodes. The total data set tree is fully resolved and strongly supported at most nodes. Statistical tests indicated that this tree is compatible with all individual and combined data sets. Therefore, we accepted this tree as the most likely model of historical relationships. We compared the new molecular phylogeny to earlier estimates based on morphology and chromosome structure and discuss its taxonomic and evolutionary implications.     

The major opsin in bees (Insecta: Hymenoptera): A promising nuclear gene for higher level phylogenetics.

We report the phylogenetic utility of the nuclear gene encoding the long-wavelength opsin (LW Rh) for tribes of bees. Aligned nucleotide sequences were examined in multiple taxa from the four tribes comprising the corbiculate bees within the subfamily Apinae. Phylogenetic analyses of sequence variation in a 502-bp fragment (approx 40% of the coding region) strongly supported the monophyly of each of the four tribes, which are well established from previous studies of morphology and DNA. Trees estimated from parsimony and maximum likelihood analyses of LW Rh sequences show a strongly supported relationship between the tribes Meliponini and Bombini, a relationship that has been found uniformly in studies of other genes (28S, 16S, and cytochrome b). All of the tribal clades as well as relationships among the tribes are supported by high bootstrap values, suggesting the utility of LW Rh in estimating tribal and subfamily rank for these bees. The sequences exhibit minimal base composition bias. Both 1st + 2nd and 3rd position sites provide information for estimating a reliable tree topology. These results suggest that LW Rh, which has not been reported previously in studies of organismal phylogenetics, could provide important new data from the nuclear genome for phylogeny reconstruction.     

A molecular analysis of the interrelationships of tetraodontiform fishes (Acanthomorpha: Tetraodontiformes)

Tetraodontiform fishes (e.g., triggerfishes, boxfishes, pufferfishes, and giant ocean sunfishes) have long been recognized as a monophyletic group. Morphological analyses have resulted in conflicting hypotheses of relationships among the tetraodontiform families. Molecular data from the single-copy nuclear gene RAG1 and from two mitochondrial ribosomal genes, 12S and 16S, were used to test these morphology-based hypotheses. Total evidence (RAG1+12S+16S), RAG1-only, and mitochondrial-only analyses were performed using both maximum parsimony and Bayesian criteria. Total evidence and RAG1-only analyses recover a monophyletic Tetraodontiformes. However, the relationships recovered within the order differ, and none completely conform to previous hypotheses. Analysis of mitochondrial data alone fails to recover a monophyletic Tetraodontiformes and therefore does not support any of the morphology-based topologies. The RAG1 data appear to give the best estimate of tetraodontiform phylogeny, resulting in many strongly supported nodes and showing a high degree of congruence between both parsimony and Bayesian analyses. All analyses recover every tetraodontiform family for which more than one representative is included as a strongly supported monophyletic group. Balistidae and Monacanthidae are recovered as sister groups with robust support in every analysis, and all analyses except the Bayesian analyses of the mitochondrial data alone recover a strongly supported sister-group relationship between Tetraodontidae and Diodontidae. Many of the intrafamilial relationships recovered from the molecular data presented here corroborate previous morphological hypotheses.