腐殖质呼吸作用及其生态学意义

腐殖质呼吸是厌氧环境中普遍存在的一种微生物呼吸代谢模式.自1996年发现以来,日益成为生态学与环境科学领域的研究热点.在厌氧条件下,一些微生物能以腐殖质作为唯一电子受体,氧化环境中的有机质或者甲苯等环境有毒物质,产生CO2,参与碳循环;同时,腐殖质呼吸作用产生的还原态腐殖质可以还原环境中的一些氧化态物质,如Fe(III)、Mn(IV)、Cr(VI)、U(VI) 、硝基芳香化合物和多卤代污染物.因此,腐殖质呼吸能够影响环境中C、N、Fe、Mn以及一些痕量金属元素的生物地球化学循环,并且能够促进重金属以及有机污染物的脱毒,在水体自净、污染土壤原位修复、污水处理等方面具有积极作用.     

多环芳烃污染土壤微生物修复研究进展

多环芳烃是我国土壤环境质量标准中要求严格管控的一类持久性有机污染物,利用微生物技术修复有机污染土壤具有绿色、经济等突出特点,应用前景广泛。目前多学科的协同发展和新技术的研究应用,为多环芳烃土壤微生物转化机制与污染生态过程等方面带来了新的认识,同时对修复技术的实际应用与调控提供了新的思考方向。本文以多环芳烃污染土壤微生物修复为主体,从污染土壤微生物修复应用技术、多环芳烃微生物降解特征、土壤体系污染物归趋规律与微生物作用及土壤污染微生物群落响应与研究技术等方面进行综合评述,并针对现存应用技术瓶颈和理论空白作进一步思考和展望。     

铁还原菌在水资源再生与能源转化领域的研究进展

铁还原菌是一种典型的异化金属还原菌,广泛分布于海洋沉积物、陆地深地层等自然环境,该类细菌可以将铁氧化物中的Fe(Ⅲ)还原为Fe(Ⅱ),在铁、碳的生物地球化学铁循环中发挥重要作用。铁还原菌的末端电子不局限于Fe(Ⅲ),还可以是其他高价金属、有机污染物,可用于土壤、地下水的污染修复和毒性削减。在微生物电化学系统中,铁还原菌氧化有机物产生的电子直接传递给电极,可以产生电能。基于这种独特的胞外电子传递方式,衍生出了微生物燃料电池、微生物电解池、微生物脱盐电池、微生物燃料电池耦合芬顿反应以及光催化微生物燃料电池,常用于微生物发电、生物传感器、生物制氢、定向发酵、海水淡化、生物脱盐和污染物分解矿化。本文从异化铁还原菌的代谢机制、微生态作用、环境修复、水资源再生与能源转化四个方面,综述了铁还原菌的作用原理及国内外研究现状,分析论述了目前亟需解决的关键问题和未来的研究方向,以期为铁还原菌的基础理论研究和应用技术研发提供参考。     

微生物对砷的作用机理及利用真菌修复砷污染土壤的可行性

利用真菌修复砷污染土壤和水体具有很大的发展潜力,是环境科学领域研究的热点.环境中存在的砷虽然不能像有机污染物那样被微生物降解,但可以通过微生物对砷的氧化/还原、吸附/解吸、甲基化/去甲基化、沉淀/溶解等作用影响其生物有效性,从而达到降低环境中的砷毒害、修复砷污染环境的目的.本文阐述了微生物对砷的作用机理,综述了真菌对砷累积与挥发研究的最新进展,探讨了其在修复砷污染土壤方面的可行性,旨在为利用真菌来修复砷污染土壤提供理论依据.     

植物根系分泌物对土壤污染修复的作用及影响机理

生物修复是一种经济环保的土壤修复技术。根系分泌物是利用生物修复污染土壤过程中的关键物质,也是植物与土壤微生物进行物质交换和信息传递的重要载体,在植物响应污染物胁迫中扮演重要角色。研究植物根系分泌物对土壤污染修复的作用和影响机理,是深入理解植物和微生物环境适应机制的重要途径,对促进生物修复污染土壤有重要指导意义。从污染物胁迫对根系分泌物的影响、根系分泌物对土壤污染物环境行为的影响、根系分泌物在调控污染土壤中根际微生物群落结构和多样性中发挥的作用等几个方面综述了根系分泌物对土壤污染修复的影响及内在机制。研究结果表明,根系分泌物在降低重金属对植物的毒性、加速有机污染物降解等方面有非常重要的作用。根系分泌物对土壤微生物的丰度和多样性均有显著影响,其与根际微生物互作在土壤污染物的消减中发挥了重要的调控作用。在此基础上,提出了以往研究中的不足,并对污染物胁迫下根系分泌物未来研究的方向和趋势进行了展望。     

铁氧化菌耐砷机制及其砷污染修复应用的研究进展

砷污染作为全球性环境问题已经引起了人们的高度重视。无机砷化合物可与铁氢氧化物络合通过共沉淀作用去除。因此,利用具有砷耐性的铁氧化菌氧化环境中的铁元素去除砷化合物具有潜在的应用前景。目前已有利用铁氧化菌去除环境中砷污染物的报道。用于砷污染修复的铁氧化菌必须有一定的砷耐性才能在含砷环境中行使功能。微生物是否具有砷耐性往往取决于基因,并且不同的菌株具有不同的生理特征,适宜不同砷污染环境的修复。本文通过对8株代表性的铁氧化菌砷耐性基因的总结,阐述其耐砷机制、研究概况及应用前景,以期为铁氧化菌用于除砷新技术的开发提供参考。     

微生物介导铁还原耦合氨氧化过程的研究进展

铁的氧化还原过程可以显著影响环境中次生矿物的形成、养分转化和污染物的归趋。作为厌氧环境中新发现的铁循环过程,铁氨氧化过程对自然和农田生态系统中氨氧化的贡献可达10%以上,对环境保护和农业生产具有深远的意义。文章主要从发展历程、相关微生物、反应机制、影响因素和环境意义等方面综述了铁氨氧化过程。在此过程中,Acidimicrobiaceaesp.A6和异化铁还原菌(DIRB)是驱动铁氨氧化过程的关键微生物,环境pH、Fe(Ⅲ)的浓度和种类、碳源和Mn(Ⅳ)氧化物是重要环境影响因子。铁氨氧化过程可能由微生物独立驱动完成,也可能由微生物-化学耦合作用驱动完成。从环境意义看,铁氨氧化过程对减少温室气体排放、固定重金属等方面具有积极影响,但也会导致氮素流失等负面环境效应。后续的研究可以从纯化微生物、拓展研究方法等方面着手,进一步提升铁氨氧化过程的研究广度和深度。     

微生物厌氧呼吸与有机污染水体沉积物修复

水体沉积物有机污染是当前全球关注的重要环境问题。微生物具有呼吸和代谢多样性,能以多种污染物作为厌氧呼吸的电子供体或受体,与周围环境中的生物和非生物因素组成代谢网络耦合有机污染物降解转化,是有机污染水体沉积物修复的重要驱动者。本文重点综述了微生物厌氧呼吸、电子传递网络及其对有机污染水体沉积物的修复机制研究进展,并对有机污染水体沉积物微生物修复理论和技术研究的问题和挑战进行了探讨。     

多环芳烃的真菌漆酶转化及污染土壤修复技术

漆酶可以转化多种有机污染物,在环境保护领域具有广泛的应用潜力。二十年来,通过多学科协同研究,对真菌漆酶转化多环芳烃的机制、特征等各方面的认识不断深入。基于漆酶等真菌木质素分解酶的污染土壤修复技术不断发展,并逐渐走向田间应用。本文首先介绍了真菌漆酶的一般作用机制与多环芳烃转化特征,结合我们的相关研究提出了漆酶作用下多环芳烃在土壤中的迁移模式;其次介绍了利用漆酶氧化原理修复污染农田土壤的潜力,着重对利用农业废弃物进行真菌生物刺激的修复实践进行了评述;最后,就漆酶转化多环芳烃基础研究中的若干重要问题进行了思考,并展望了真菌及其漆酶系统在污染土壤修复应用中的发展方向。     

Fe(Ⅲ)的微生物异化还原

异化Fe（Ⅲ）还原微生物是厌氧环境中广泛存在的一类主要微生物类群,它们的共同特征是可以利用Fe（Ⅲ）作为末端电子受体而获能。异化Fe（Ⅲ）还原微生物具有强大的代谢功能,可还原许多有毒重金属包括一些放射性核素,还可降解利用许多有机污染物,在污染环境的生物修复中具有重要的应用价值。本文对异化Fe（Ⅲ）还原微生物的分布、分类,代谢功能多样性以及异化Fe（Ⅲ）还原的意义做了评述,旨在加强相关领域的研究人员对此的了解和重视,通过学科的交叉和合作加快我国在这一领域的研究。     

硝酸盐还原条件下Fe0/厌氧微生物联合体系降解2,4,6-三氯酚

本文采用间歇试验,对硝酸盐还原条件下Fe0/厌氧微生物联合体系降解2,4,6-三氯酚(2,4,6-TCP)进行了研究。考察了不同硝酸盐浓度下,体系中pH、硝酸盐浓度以及硝酸盐还原活性的变化情况。结果表明:当2,4,6-TCP初始浓度为20mg/L时,硝酸盐对Fe0/厌氧微生物联合体系降解2,4,6-三氯酚具有明显的抑制作用;且随着硝酸盐浓度的升高,2,4,6-TCP的去除率降低,硝酸盐还原活性升高;体系先发生硝酸盐还原再进行2,4,6-TCP还原脱氯。     

Inhibition of bacterial perchlorate reduction by zero-valent iron

Perchlorate was reduced by a mixed bacterial culture over a pH range of 7.0–8.9. Similar rates of perchlorate reduction were observed between pH 7.0 and 8.5, whereas significantly slower reduction occurred at pH 8.9. Addition of iron metal, Fe(0), to the mixed bacterial culture resulted in slower rates of perchlorate reduction. Negligible perchlorate reduction was observed under abiotic conditions with Fe(0) alone in a reduced anaerobic medium. The inhibition of perchlorate reduction observed in the presence of Fe(0) is in contrast to previous studies that have shown faster rates of contaminant reduction when bacteria and Fe(0) were combined compared to bacteria alone. The addition of Fe(0) resulted in a rise in pH, as well as precipitation of Fe minerals that appeared to encapsulate the bacterial cells. In experiments where pH was kept constant, the addition of Fe(0) still resulted in slower rates of perchlorate reduction suggesting that encapsulation of bacteria by Fe precipitates contributed to the inhibition of the bacterial activity independent of the effect of pH on bacteria. These results provide the first evidence linking accumulation of iron precipitates at the cell surface to inhibition of environmental contaminant degradation. Fe(0) was not a suitable amendment to stimulate perchlorate-degrading bacteria and the bacterial inhibition caused by precipitation of reduced Fe species may be important in other combined anaerobic bacterial–Fe(0) systems. Furthermore, the inhibition of bacterial activity by iron precipitation may have significant implications for the design of in situ bioremediation technologies for treatment of perchlorate plumes.     

Improved experimental and computational methodology for determining the kinetic equation and the extant kinetic constants of Fe(II) oxidation by Acidithiobacillus ferrooxidans

The variety of kinetics expressions encountered in the literature and the unreasonably broad range of values reported for the kinetics constants of Acidithiobacillus ferrooxidans underscore the need for a unifying experimental procedure and for the development of a reliable kinetics equation. Following an extensive and critical review of reported experimental techniques, a method based on batch pH-controlled kinetics experiments lasting less than one doubling time was developed for the determination of extant kinetics constants. The Fe(II) concentration in the experiments was measured by a method insensitive to Fe(III) interference. Kinetics parameters were determined by nonlinear fitting of the integrated form of the Monod equation to yield a K(S) of 31 +/- 4 mg Fe(2+) liter(-1) (mean +/- standard deviation), a K(P) of 139 +/- 20 mg Fe(3+) liter(-1), and a mu(max) of 0.082 +/- 0.002 h(-1). The corresponding kinetics equation was as follows: dSdt=-0.0822.3.10(7)S.X31(1+P(0)+S(0)-S139)+S where S represents the Fe(II) concentration in mg liter(-1), P(0) represents the initial Fe(III) concentration in mg liter(-1), X represents the suspended bacterial cell concentration in cells ml(-1), and t represents time in hours. The measured data fit this equation exceptionally well, with an R(2) of >0.99. Fe(III) inhibition was found to be of a competitive nature. Contrary to previous reports, the results show that the concentration of Acidithiobacillus ferrooxidans cells has no affect on the kinetics constants. The kinetics equation can be considered applicable only to A. ferrooxidans cells grown under environmental conditions similar to those of the inoculum tested in the study. In contrast, the experimental and computational procedure is completely general and can be applied to A. ferrooxidans irrespective of the culture history.     

Reductive dechlorination of trichloroethylene by combining autotrophic hydrogen-bacteria and zero-valent iron particles

The objective of this study was to evaluate the dechlorination rate (from an initial concentration of 180 micromol l(-1)) and synergistic effect of combining commercial Fe(0) and autotrophic hydrogen-bacteria in the presence of hydrogen, during TCE degradation process. In the batch test, the treatment using Fe(0) in the presence of hydrogen (Fe(0)/H(2)), showed more effective dechlorination and less iron consumption than Fe(0) utilized only (Fe(0)/N(2)), meaning that catalytic degradation had promoted transformation of TCE, and the iron was protected by cathodic hydrogen. The combined use of Fe(0) and autotrophic hydrogen-bacteria was found to be more effective than did the individual exercise even though the hydrogen was insufficient during the batch test. By the analysis of XRPD, the crystal of FeS transformed by sulfate reducing bacteria (SRB) was detected on the surface of iron after the combined treatment. The synergistic impact was caused by FeS precipitates, which enhanced TCE degradation through catalytic dechlorination. Additionally, the dechlorination rate coefficient of the combined method in MFSB was 3.2-fold higher than that of iron particles individual use. Results from batch and MFSB experiments revealed that, the proposed combined method has the potential to become a cost-effective remediation technology for chlorinated-solvent contaminated site.     

Evaluation of complexed NO reduction mechanism in a chemical absorption–biological reduction integrated NO<Subscript><Emphasis Type="BoldItalic">x</Emphasis></Subscript> removal system

Biological reduction of nitric oxide (NO) from Fe(II) ethylenediaminetetraacetic acid (EDTA)-NO to dinitrogen (N(2)) is a core process for the continual nitrogen oxides (NO(x)) removal in the chemical absorption-biological reduction integrated approach. To explore the biological reduction of Fe(II)EDTA-NO, the stoichiometry and mechanism of Fe(II)EDTA-NO reduction with glucose or Fe(II)EDTA as electron donor were investigated. The experimental results indicate that the main product of complexed NO reduction is N(2), as there was no accumulation of nitrous oxide, ammonia, nitrite, or nitrate after the complete depletion of Fe(II)EDTA-NO. A transient accumulation of nitrous oxide (N(2)O) suggests reduction of complexed NO proceeds with N(2)O as an intermediate. Some quantitative data on the stoichiometry of the reaction are experimental support that reduction of complexed NO to N(2) actually works. In addition, glucose is the preferred and primary electron donor for complexed NO reduction. Fe(II)EDTA served as electron donor for the reduction of Fe(II)EDTA-NO even in the glucose excessive condition. A maximum reduction capacity as measured by NO (0.818 mM h(-1)) is obtained at 4 mM of Fe(II)EDTA-NO using 5.6 mM of glucose as primary electron donor. These findings impact on the understanding of the mechanism of bacterial anaerobic Fe(II)EDTA-NO reduction and have implication for improving treatment methods of this integrated approach.     

Combined Microbial-Fe(0) Treatment System to Remove Nitrate from Contaminated Groundwater

Experiments were conducted to delineate the applicability and limitations of biologically active Fe(0) barriers to remove nitrate under various geochemical and hydraulic conditions. Microcosm studies showed that, while no Fe(0) treatment was needed to remove nitrate from a high-carbon soil, adding Fe(0) to a low-carbon soil supplemented the electron donor pool and enhanced nitrate removal. Montmorillonite, an acidic aluminosilicate mineral, enhanced Fe(0) corrosion and nitrate removal (from about 1 to 3 mg/L NO₃-N per day), and reduced the transient accumulation of nitrite. Combining autotrophic denitrifiers (e.g., Paracoccus denitrificans) with Fe(0) significantly reduced the amount of nitrite eluted from aquifer columns, from up to 7 to less than 1 mg/L NO₂∼-N. Bacteria were observed to preferentially colonize the Fe(0) surface, which produces cathodic H₂ when corroded by water. The preferential colonization of Fe(0) suggests that hydrogenotrophic consortia are likely to develop around Fe(0) walls to exploit cathodic depolarization as a metabolic niche.     

A pilot study on the regeneration of ferrous chelate complex in NOx scrubber solution by a biofilm electrode reactor

A chemical absorption-biological reduction integrated process has been proposed for the removal of nitrogen oxides (NO_x) from flue gases. In this study, we report a new approach using biofilm electrode reactor (BER) to regenerate Fe(II)EDTA via simultaneously reducing Fe(II)EDTA-NO and Fe(III)EDTA in NO_x scrubber solution. Biofilm formed on the surface of the cathode was confirmed by Environmental Scan Electro-Microscope. Experimental results demonstrated that it was effective and feasible to utilize the BER to promote the reduction of Fe(II)EDTA-NO and Fe(III)EDTA simultaneously. The reduction efficiency of Fe(II)EDTA-NO and Fe(III)EDTA was up to 85% and 78%, respectively when the BER was continuously operated with electricity current at 30 mA. The absence of electricity induced an immediate decrease in reduction efficiency, indicating that the bio-regeneration of ferrous chelate complex was electrochemically accelerated. The present approach is considered advantageous for the enhanced bio-reduction in the NO_x scrubber solution.     

Modulation of the root epidermal phenotype by hormones,inhibitors and iron regime

Patterning of epidermal cells is subject to genetic regulation but also influenced by environmental stimuli. To adapt to unfavorable environmental conditions plants have developed various mechanisms to increase the plasma membrane's surface area of epidermal root cells, for example through the formation of root hairs and differentiation of rhizodermal transfer cells. Mechanisms controlling cell fate speciation in the rhizodermis were investigated by application of hormones and hormone antagonists. In addition, the effect of Fe deficiency on root epidermal patterning and Fe(III)-reduction activity was examined. In the iron-hyperaccumulating pea mutants dgl and brz and in the Arabidopsis mutant man1 Fe(III)-reduction activity was found to be up-regulated under both high and low iron supply. In contrast, morphological responses such as the development of transfer cells and extranumerary root hairs was repressed by a high iron concentration in the external medium. All morphological responses can be mimicked by exogenous application of the ethylene precursor 1-aminocyclopropane-1-carboxylic acid (ACC) or the auxin analog 2,4-dichlorophenoxyacetic acid (2,4-D). Conversely, Fe(III)-reduction rates were not influenced or only slightly affected by the hormone treatment. Application of inhibitors of ethylene synthesis, ethylene action or auxin transport was effective only in inhibiting the formation of extra root hairs, indicating that these hormones are not required for transfer cell formation or expression of Fe(III) reduction. These data suggest that the Fe reductase induced by iron stress does not depend on the formation of transfer cells and further imply separate regulatory pathways for the two responses. The data are compatible with a model in which root reduction activity is modulated by a shoot-borne signal coordinating iron uptake with the shoot demand, while the epidermal phenotype is primarily dependent on the intracellular iron concentration of root cells.     

Maternal and fetal iron accumulation in Zn-deficient and salicylate-treated rats

Nonhemoglobin Fe (non Hb−Fe) content in fetal serum and liver is much higher than in maternal serum and liver. After feeding a Zn-deficient diet to pregnant rats from d 0 to 21, non Hb−Fe content in maternal and fetal serum and liver was increased. After oral application of salicylic acid (300 mg/kg) from d 16 to 20 to normally fed and Zn-deficient dams, non Hb−Fe content in maternal and particularly in fetal serum and liver was drastically increased. In the kidney, Fe was accumulated to a small amount resulting from Zn deficiency and salicylate treatment. Fe accumulation in the liver occurred in all cell fractions, particularly in microsomes. Fe accumulation was confirmed and extended histochemically by Prussian blue staining. It is assumed that salicylate increases intestinal Fe resorption and fetal transfer of Fe. It is discussed that salicylate nephrotoxicity and its enhancement by Zn deficiency is not caused by an Fe-dependent mechanism. This work is supported by the German Research Foundation (Sfb 174)     

Getting a sense for signals: regulation of the plant iron deficiency response

Understanding the Fe deficiency response in plants is necessary for improving both plant health and the human diet, which relies on Fe from plant sources. In this review we focus on the regulation of the two major strategies for iron acquisition in plants, exemplified by the model plants Arabidopsis and rice. Critical to our knowledge of Fe homeostasis in plants is determining how Fe is sensed and how this signal is transmitted and integrated into a response. We will explore the evidence for an Fe sensor in plants and summarize the recent findings on hormones and signaling molecules which contribute to the Fe deficiency response. This article is part of a Special Issue entitled: Cell Biology of Metals.